Cinclus cinclus (white-throated dipper): 134056759
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Entry
134056759 CDS
T10813
Symbol
ABCA1
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic02010
ABC transporters
ccic04148
Efferocytosis
Brite
Transporters [BR:
ccic02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
134056759 (ABCA1)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
Motif
Other DBs
NCBI-GeneID:
134056759
NCBI-ProteinID:
XP_062369628
LinkDB
All DBs
Position
Z:complement(41385677..41476967)
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AA seq
2262 aa
AA seq
DB search
MAFWTQLGLLLWKNFTYRRRQTFQLLIEVAWPLFIFFILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWIQGIICNANNPCFRYPTPGESPGIVGNFNASIVSRLFSDARRLLLYSQQDT
SIKDVQKVLGTLRKLGNSSGLELKLRDFLIDNETFSDFLHHNVSMPSSAVEELLDAGVDL
QQVLVSGYRMRLRDLCNSSASPEFLTIQNQTAVMDSEAFICSLSREKLHAAEQAFRANLN
PLKPLQRQLSFNSSLWDLSETVETLRESVGNLVKELLSMKSWSDMRQEVMFLTNVNTSNS
STQIYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNSTEDDVINFYDNSTTPYCN
ELMKNLESSPLSRIIWRALKPLLIGKILYTPDTPAVRKVMSEVNRTFQELGVFRDLGGMW
EEISPKIWTFMESSQEMDLIRTLLTGKALWDLHLPASNWTVEDVARFLSNSPEDFEAENG
SVYTWMDAFNETDRAIQTISRFMECVNLDKLEPVPTEVRLINKSLELLDERRFWAGIVFT
GVAPDSTDLPQHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFVYLQDV
VEQAIIRVQTGTEKKTGVYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGI
VYEKEARLKETMRIMGLDNGILWLSWFISSLVPLLMSAGLLVLILKMGNLLPYSDPSVVF
IFLSIFGVVTILQCFLISTVFSRANLAAACGGIVYFTLYLPYVLCVAWQDHISFSLKIFA
SLLSPVAFGFGCEYFALFEEQGVGVQWDNFFESPLEEDGFSITTSAVMMLFDTFLYGVMT
WYIESVFPGQYGIPRPWYFPFTKSYWFGEEPQDRHHHHPDQKGSSEVCKEEEPVHLSLGV
SIQNLVKVYRDGKKVAVDGLTLNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAFI
LGKDIRSELSTIRQNLGVCPQHNVLFDLLTVEEHIWFYARLKGLPEKKVKEEMEQMATDV
GLPHKLKARTSRLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQ
GRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVDSSLS
SCRNSSSTVSYLKKDDSVSQSSSDAGLGSDHESDTLTIDVSAISNLITKHVPEARLVEDI
GHELTYVLPYKAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVADDSGVDAE
TSDGTLPARRNRRVFGDRQSCLRPFTEDDAFDPNDSDIDPAESRETDLLSGMDGKGSYQM
KGWKLTQQQFMALLWKRMLIAKRSRKGFFAQIVLPAVFVCIALMFSLIVPPFGKYPSLEL
QPWMYDEQYTFISNDAPEDAGTHKLLDALLDKPGFGTRCMQGHSIPDTPCTVGQKEWTTA
SVPESVLDIFLKGNWSMENPSPSCECSSEKIKKMLPVCPPGAGGLPPPQREQDTADILQN
LTGRNISDYLVKTYAQIIGKSLKNKIWVNEFRYGGFSLGASSSLVLPPSHEVTDAIKQVK
KILELAQGSSGDRFLNSLSSFMKGLDTKNNVKVWFNNKGWHAIASFLNVINNAILRANLQ
QGENPSAYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQE
RVSKAKHLQFISGVKPVIYWLANFVWDMCNYIVPATLVVIIFICFQQKSYVSSSNLPVLA
LLLFLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLKDI
NDILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVE
GVVFFLITVLIQYRFFIKPRPVYAKLPPVNDEDEDVTRERQRIISGGGQSDILEIKELTK
IYRMKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTDVTGGEAFLKGNSILS
NIQEVHQNMGYCPQFDAVNELLTGREHLEFFALLRGVPEKEVCKVGEWAIRKLGLVKYGE
KYAGNYSGGNRRKLSTAIALIGGPPVVFLDEPTTGMDPKARRFLWNCALSVIKEGRSVVL
TSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGANPDLKPVEEFF
GHAFPGSVLKEKHRNMLQYQLPSSPSSLAKIFSILSQNKKRLHIEDYSVSQTTLDQVFVN
FAKDQSDDDHTKDLSLHKNQTVVDIAILNSFLQDEKVKESCV
NT seq
6789 nt
NT seq
+upstream
nt +downstream
nt
atggctttctggacacagctgggattgctgctatggaagaactttacctacagaagaaga
cagactttccagctgctgatcgaagttgcctggcctctgtttatcttcttcatcctgatc
tctgtaagactttcatatccgccctatgagcagcatgaatgtcactttccaaataaagct
atgccttcggcaggaaccttgccatggatacaggggatcatctgcaatgccaacaaccca
tgtttccgctacccaactccaggggaatcccctggtattgttggaaacttcaatgcctcg
atcgtttcccgcctgttctcggatgccaggaggttactgttgtacagccaacaggacacg
agtataaaggatgtccagaaggtcctgggaacactacgcaagttgggaaattcctctggc
ctagagttgaaacttcgggatttcctgattgacaatgagacgttctctgacttcctccat
cataatgtgtccatgccatcatctgcagtagaggagctactggatgcaggggtcgacctc
cagcaggtccttgtatctggttatcgaatgcgactgcgagatctctgcaatagctccgca
tcacctgaatttcttacaatccagaatcagacagcagtcatggactctgaagccttcatt
tgcagcttgtcaagggaaaaactccatgcagctgagcaagctttccgtgctaatctgaat
cctctgaagcctcttcagagacaactttctttcaattcctccttgtgggatctgtcagaa
actgtggaaactttgagagaaagcgttgggaatcttgttaaagagctgctgagcatgaag
agctggagtgacatgaggcaagaggtgatgttcctgaccaatgtgaacacctcaaactcc
tctacacagatctatcaggctgtgtcacgcattgtgtgtggccatcctgaaggtggaggg
ctcaaaattaaatctctcaactggtatgaggataacaattacaaagcactgtttggaggc
aacagcactgaagatgatgtgattaacttctatgataactcaacaacaccctactgcaat
gaactaatgaagaacctggaatccagcccgctttccaggattatctggagggctttgaag
cccttgctgattgggaagatcttgtacactccagatacaccagctgtaaggaaggtcatg
tctgaggtgaacaggacattccaggagctgggtgtgtttcgtgaccttgggggaatgtgg
gaggagataagcccaaaaatttggacatttatggaaagtagtcaggaaatggatctcatt
cggaccttgctgacaggcaaagccctctgggacctgcacttgccagcttccaactggaca
gtggaggatgttgcccgtttcctgtcaaacagtccagaggactttgaagcagaaaatggc
tctgtgtacacctggatggatgccttcaatgagacagaccgggctatccagaccatctcc
cgcttcatggagtgtgtcaacttggacaaactggagcctgtgcccacagaagtccggctc
attaacaagtccttggagcttctggatgaaaggaggttctgggctggcatagtcttcact
ggagtagctcctgacagcacagaccttcctcagcatgtgaaatacaagatacgcatggac
attgataatgtggaaaggaccaacaagatcaaggatgggtactgggatcctggtccccgt
gctgacccctttgaggacatgcgctatgtctggggaggctttgtctacctgcaggatgtg
gtagaacaggccatcatcagggttcagacaggcacggagaagaagacaggagtttatgtg
cagcagatgccctacccatgctacgtggatgacatatttctgcgtgtcatgagccgctcc
atgcctctcttcatgacactagcttggatctactcagtggctgtgataattaagggcatt
gtgtatgagaaggaagctcggctgaaagaaacaatgagaattatgggacttgacaatggc
atcctttggttaagctggttcattagcagcctcgttcctctcctgatgagtgcaggactg
ctggtgctgattctgaagatggggaatctgctgccttacagtgatcctagtgtggtgttc
attttcctctcaatctttggcgttgtgaccatcctccagtgcttcctcatcagcaccgtg
ttctccagggctaacctcgcagctgcctgtgggggaattgtctacttcacgctgtacctg
ccttatgtgttgtgtgttgcctggcaggaccacatcagcttctctctcaagatttttgcg
agcctgctgtctccagtagcctttggtttcggttgcgagtactttgcactgtttgaggag
cagggtgttggtgttcagtgggacaacttctttgagagcccattggaagaagatggcttt
agcatcactacatcagctgtcatgatgctgtttgataccttcctgtatggagtcatgacc
tggtatattgaatctgtcttcccaggccaatatgggattcccagaccctggtactttcct
ttcacaaagtcctattggtttggggaggaaccacaggacaggcaccaccaccatcctgac
cagaaggggtcttcagaagtctgcaaggaggaagagccagtgcatctgagtctaggtgtt
tccatccagaacctggtcaaggtttaccgtgatggcaagaaagttgctgtagatggtctt
acacttaacttctatgaaggacaaatcacctcctttctgggacataacggagcagggaaa
accactactatgtccattttgactggcttgttccccccaacttcaggtacagccttcatc
ctgggcaaagatatccgctctgagcttagcaccatcaggcagaacctgggtgtatgtcca
caacacaatgtgctgtttgacttgctgactgtggaggagcacatctggttctatgctcga
ctcaaagggctgccggaaaagaaggtgaaagaggagatggagcagatggcaacagatgtt
ggtttgcctcacaaactgaaagctaggacaagcaggctctctggtggcatgcaaaggaag
ctttctgttgccttagcatttgtcggtggctccaaggttgtcattctggatgagcctaca
gctggggtggatccttattctcgcagaggaatatgggaactgcttctgaagtatcggcaa
ggtcgcactatcattctctccacacaccatatggatgaggcagacattctgggagaccgg
attgccatcatttctcatggcaagctctgctgtgttggctcatctctcttcctgaagaac
cagctgggaacaggctattatttgaccctggtcaaaaaggatgtggattcctctctgagc
tcctgccgaaacagcagcagcacagtttcctatctgaaaaaggatgacagtgtctcccag
agcagttctgatgctggccttggcagtgaccatgaaagtgacacgttgacaatagatgtc
tctgcaatttcaaatctcattacaaaacatgttcctgaggcaagactggtggaggacata
ggtcatgaattaacctatgtcttgccatacaaagctgctaaagagggagcttttgtggag
ctattccatgaaattgatgaccgtctttctgatcttggcatttccagctacggcatctct
gaaactactctggaagagatcttcctgaaagtggctgatgatagtggtgtggatgcagaa
acctcagatggtacgttgccagccagaaggaacagacgtgtatttggagacagacagagc
tgccttcgtccatttacagaagatgatgcatttgatcctaatgactcagacatagatcca
gcagaatccagagagacagaccttctgagtggcatggatgggaaaggctcctaccagatg
aagggctggaagctcacccagcagcagttcatggctctgttgtggaagaggatgcttatt
gccaagagaagccggaagggtttttttgctcagattgtgctgccagctgtctttgtctgt
attgctctcatgttcagcctgattgttcctccttttgggaagtatcccagcttggaatta
caaccttggatgtatgatgagcagtacactttcattagcaatgatgctccagaagatgca
ggcactcacaagcttttggacgcccttcttgataagccggggtttgggacacgctgtatg
caaggacattccatcccagacactccttgcactgtggggcagaaggaatggaccactgcc
tcagttcccgagtcggtcctggacatcttcctgaagggcaactggagcatggagaatcct
tccccatcttgcgagtgtagcagtgagaagatcaagaaaatgctgcctgtgtgcccccct
ggtgcaggtggcctgccacccccacagcgtgagcaagacacggctgacatcctccagaat
ctgacaggccgcaatatatcagactacctagtgaagacctatgcgcagatcattgggaaa
agcttaaagaataaaatctgggtgaatgagttcaggtatggtggcttctccttgggagcc
agcagttcccttgtgcttcctccaagccatgaagtcactgatgccattaaacaggtgaag
aaaattttggagctggcacaggggagttctggggatcgatttctcaacagtttatcaagt
ttcatgaaaggcttggatacaaagaacaacgtgaaggtgtggtttaacaacaagggctgg
catgccattgcatccttcctgaatgtgatcaacaatgccatccttcgggccaacctccag
cagggtgaaaaccccagtgcttatgggatcactgccttcaatcacccactcaacctcacc
aagcagcagctctctgaagtagctctgatgaccacctctgtggatgtcctggtgtctatc
tgtgtgatctttgccatgtcctttgttcctgccagctttgtggttttccttattcaggaa
cgtgtcagcaaggctaaacacttgcagttcatcagtggtgtgaagcctgtgatctactgg
ctggccaattttgtgtgggatatgtgcaactacattgttccagccacactagttgtcatc
atcttcatctgcttccagcagaagtcctatgtatcctcctccaacttgcctgtgctggct
ctccttctgtttctctatgggtggtccatcacccctctcatgtatccggcctcctttgtg
ttcaaaatccctagcacagcatatgttgtgctgaccagtgtgaatctcttcattggcatc
aatgggagtgtggccacttttgtcctggagctcttcaccaacaataagctgaaggacatc
aatgacatcctgaaatctgtattcctcatcttcccccacttctgcctgggccggggactc
attgacatggttaaaaaccaggctatggctgatgctctggagagatttggagagaatcgt
tttgtgtcccctctgtcgtgggacctggtgggaaggaacctctttgccatggcagtagag
ggtgttgtgttttttctcatcacggtgctcattcagtacaggttcttcatcaaacccagg
cctgtctatgccaagctgcctcctgtgaatgatgaagatgaggatgtaaccagagagagg
cagaggataattagtggtggaggacagagtgacattttggaaatcaaggagctaaccaag
atttacagaatgaagagaaagccagcagttgataggatctgtgttggaatcccccctgga
gagtgctttggactcctgggagtaaatggtgctggcaagtcatccacttttaagatgcta
actggtgatacagatgtgacgggaggagaagctttcctcaaaggaaacagtatcttgtcc
aacattcaagaagtccatcagaacatggggtactgcccacagttcgatgctgttaatgaa
ctcctgacagggcgagagcacttggagttctttgcacttctgagaggtgttccagagaaa
gaagtctgcaaggttggcgagtgggcaattcggaaactgggccttgtgaaatatggagaa
aaatacgccgggaattacagtggagggaacagacgaaagctttccacagccattgccctc
attggagggccacctgtggtgttcctggatgagccaacaacagggatggatcccaaagca
cgtcggttcttgtggaactgtgctctgagtgtaatcaaggaggggagatcagtggtgctc
acatctcacagcatggaagaatgtgaagccctgtgcactcgaatggcaataatggtcaat
gggcgattcaggtgtctgggcagtgtccagcacctaaagaacaggtttggagacggttac
accatagtggtgagaattgcaggggcaaacccagacttaaagcctgttgaggagttcttt
gggcatgccttccctggaagtgtcctgaaagaaaaacatcggaatatgctgcagtaccaa
cttccttcttcaccatcctccctggccaaaatattcagtattctctcccagaacaagaag
agactccacatagaagactactccgtttctcagaccacacttgaccaagtttttgtgaat
tttgctaaggaccaaagtgacgacgaccatactaaggacctgtcattgcacaaaaaccag
actgtggtagacattgcaatccttaactccttcctgcaagatgagaaggtaaaagaaagt
tgtgtgtga
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integrated database retrieval system
