Cinclus cinclus (white-throated dipper): 134056765
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Entry
134056765 CDS
T10813
Symbol
KCMF1
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase KCMF1
KO
K22376
E3 ubiquitin-protein ligase KCMF1 [EC:
2.3.2.27
]
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccic04121
]
134056765 (KCMF1)
Enzymes [BR:
ccic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134056765 (KCMF1)
Ubiquitin system [BR:
ccic04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
134056765 (KCMF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-Di19
ZZ
TagA
zf-C2H2
DUF6244
Dicty_REP
Zn_SUZ12
TFIIA
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
134056765
NCBI-ProteinID:
XP_062369634
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All DBs
Position
Z:complement(40432913..40476262)
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AA seq
559 aa
AA seq
DB search
MRVLRVRPVLGSVTSSASLPRAEPALARQPAREGLRPAGEFPLPPAARPGREEEGEGAGA
GAGKAPARPPPSLVRQGRSGAGGGAXGRRGPESPCHGAREAVAAGSAPRRASEEAGGGGE
GGGGRPAPRRLLCFRPLPGPAPXPLLSHRGGGGGRGLSGARAARGSPGTGLGRRLWTRMS
RHEGVSCDACLKGNFRGRRYKCLICYDYDLCATCYESGATTTRHTTDHPMQCILTRVDFD
LYYGGEAFSVEQPQSFTCPYCGKMGYTETSLQEHVTSEHAETSTEVICPICAALPGGDPN
HVTDDFAAHLTLEHRAPRDLDESSGVRHVRRMFHPGRGLGGPRARRSNMHFTTSSPGGLS
SSQSSYSPSNREAMDPIAELLSQLSGVRRSAGGQLNSSGPSASQLQQLQMQLQLERQHAQ
AARQQLETARNATRRTNTINVNTTMTQSTTTTNTSNTENSQQTIQNSQFLLTRLNDPKMS
EAERQSMESERADCSLFVQELLLSTLMQEESSSSDEDERGEIADFGAMGCVDIMPLDVAL
ENLNLKESNKGNEPPPPPL
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtccttcgggtcaggccggtgctgggttccgttacctcgtccgcttccttgccc
cgggcggagcccgccttggcccggcagcccgcgcgagagggcctccgccctgccggggag
tttcctcttcctccagcagcgcggccggggcgggaggaggaaggggaaggggcaggggcc
ggggccgggaaggctccagcgcggccgccgccgtcgctggtgcggcaggggcggagcggc
gcgggaggcggcgccnacggccggcggggcccggagtcaccgtgtcacggcgcccgggaa
gccgttgccgccggatccgccccccgcagggcgagcgaggaggcaggaggaggaggagaa
ggaggaggagggaggccggctcctcgccgcctcttgtgttttcgcccccttcctggccca
gccccgngccctctcctctcgcaccggggcggcggcggggggcgaggcctcagcggcgcc
cgagctgcccgcggaagccctgggacgggcctgggccgccgtctctggactaggatgtcc
cgacatgaaggtgtcagctgtgatgcatgtttaaaaggaaattttcgaggtcgccggtac
aagtgtttaatttgctacgattacgatctgtgtgcaacttgttatgaaagtggtgcaacg
acaacaaggcatacaactgaccatccaatgcagtgcatactaacaagagtagattttgac
ttgtactatggtggagaagctttctctgtagagcagccacagtctttcacttgtccttat
tgtgggaaaatggggtatacggaaacatctcttcaagagcatgttacttctgagcatgca
gaaacatcaacagaagtgatttgtccaatatgtgcagcattacctggaggggatccgaat
cacgtaacagatgactttgcagctcatcttacactggaacacagagctcctagagattta
gatgaatccagtggcgttcggcatgtacgtaggatgttccacccaggccggggtttggga
ggcccccgtgctcgtagatcaaacatgcactttactaccagttcccctggtgggctttcg
tcttctcagagttcatattctccaagcaatagagaagccatggatcctatagctgagctt
ttatcccagctatcaggtgtgaggcgttctgcaggaggacagctcaactcctctggccct
tctgcttctcagttacagcagctgcagatgcaactgcagttggaacgacaacatgcacag
gcagcaagacagcaactggagactgcacgcaatgcaaccagacgcaccaacacgatcaat
gtcaacaccactatgacacaatctacaacaacaaccaacacatctaacacagaaaacagt
cagcagactatccagaattcccagttccttctgacaaggttgaatgatccaaagatgtca
gaagcagagcgtcagtcaatggagagcgaacgggcagactgcagcctgtttgttcaggag
cttctactgtccaccttgatgcaggaagaaagttcttcctcagatgaggatgagcggggg
gagattgcagattttggtgctatgggctgtgtagatattatgcctctagatgttgcttta
gaaaacctaaatttaaaagagagtaataaaggaaatgagcctcctccacctcctctttga
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