Cinclus cinclus (white-throated dipper): 134057021
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Entry
134057021 CDS
T10813
Symbol
MYO5B
Name
(RefSeq) unconventional myosin-Vb
KO
K10357
myosin V
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
134057021 (MYO5B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccic03019
]
134057021 (MYO5B)
04131 Membrane trafficking [BR:
ccic04131
]
134057021 (MYO5B)
03029 Mitochondrial biogenesis [BR:
ccic03029
]
134057021 (MYO5B)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ccic04812
]
134057021 (MYO5B)
Messenger RNA biogenesis [BR:
ccic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
134057021 (MYO5B)
mRNA cycle factors
P-body specific factors
134057021 (MYO5B)
Membrane trafficking [BR:
ccic04131
]
Others
Actin-binding proteins
Myosins
134057021 (MYO5B)
Mitochondrial biogenesis [BR:
ccic03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
134057021 (MYO5B)
Cytoskeleton proteins [BR:
ccic04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
134057021 (MYO5B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
Myo5a
DIL
IQ
Myosin_N
AAA_22
AAA_16
Ac76
nSTAND3
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
134057021
NCBI-ProteinID:
XP_062369973
LinkDB
All DBs
Position
Z:complement(84247735..84393411)
Genome browser
AA seq
1925 aa
AA seq
DB search
MRSLETQNRTGEACVGRDLCRLTCPDERAPGREYEIRLELSRMWREPSRCAPHLRGAAWA
VCSVKAINNAGQEECWAAGKVLPCYTRVWIPDPDEVWRSAEIIKDYKEGDKSLQLKLEDE
TLYEYPIDLQGNELPFLRNPDILVGQNDLTALSYLHEPAVLHNLKVRFLESNHIYTYCGI
VLVAINPYEQLPIYEQDVIYAYSGQNMGDMDPHIFAVAEEAYKQMARDEKNQSIIVSGES
GAGKTVSAKYAMRFFATVGGSASETNIETKVLASNPIMEAIGNARTTRNDNSSRFGKYIQ
IGFDKRYHIIGANMRTYLLEKSRVVFQAEDERNYHIFYQLCASSSLPEFKDLGLTCAEDF
FYTSQGGDTSIDGVDDADDFEKTRHAFTLLGVKESHQMTIFRIIAAILHLGNLEIQGQQD
GEACSVSSEDKHLSNFCSLLGVEHNQMQHWLCHRKLVTTAETYVKNMSLHQVVNARNALA
KHIYAQLFSWIVQHINKALHSTVRQHSFIGVLDIYGFETFEVNSFEQFCINYANEKLQQQ
FNSHVFKLEQEEYMKEGIPWTLIDFYDNQPCIDLIEAKLGILDLLDEECKVPKGTDQNWA
QKLYDRHASSQHFQKPRMSNTSFIILHFADKVEYQSEGFLEKNRDTVYEEQINILKASKY
QMVADLFQEEDAVPTAATPKGTSRISVRSARPAFKTANKEHRKTVGHQFRNSLHLLMETL
NATTPHYVRCIKPNDEKLPFKFDPKRAVQQLRACGVLETIRISAAGFPSRWSYPDFFNRY
RVLMNKRDLAKQDKKKICQTLLEDLIKDPDKFQFGRTKIFFRAGQVAYLEKLRADKFRAA
TIMIQKTVRGWLQRAKYQRLRRATLALQRYARGHLARRLFENLRRTRAAIILQKQYRMVR
MHRAFLRVRKATLTIQAFARGMFVRRIYHQMLMEHKATILQKYARGWLARVRLRRAQAAA
VVLQCHWRRLRARRQLQALRIEARSAQHLKKLNIGMENKVVQLQRKVDEQNKENKLLNEQ
LSMLTSAHSSEVEKLKKELQQYERCQRGDGNQLLSLQEEMERLRMELERAHGEREVMEDS
HGKERDLLRKRISDLEEENTLLKQEKEELNNRILCQSEDEFARNTVEENIQMKKELEEER
SRYQNLVKEYAALEQRYDNLRDEITIIKQTPGHRRNPSNQSSLESDSNNPSICTSEIGDT
EDVIQQVEEIGMEKAAMDMTLFLKLQKRVRELELERKKLQAQLEKKEQESKKSQIIETKT
EVASEHEDFAYNSLKRQELESENKKLKNELNELRKAIADHATQNSSSNDVQDSYNLLLNQ
LKSANEELEVRKEEVLILRSQIMKAAQQKETGKNMVKERESISPSASWPNSDRHIDQEDA
IEAYQGMCETNRKTEDWGYLNEDGELGLAYQGLKQVARLLEAQLQDQRREHEEEMEALKN
QVDLMQEELEKQQQAFLQTLQLSPEVQVELGLQQEITRLTNENLDLKELLEKLEKNEKKL
KKQLKIYMKKVHDFEASQAMVPVERRLHERNMQVAVQRKEKNFQGMLEYYKEDEPLLIRN
LVTDLKPQAVSATVPCLPAYILFMCIRHADYINDDQKVHSLLTSTINGVKKVMKKHHDDF
EMTSFWLANTCRLLHCLKQYSGEVGFMTQNTAKQNEHCLKNFDLTEYRQVLGHLSIQIYQ
QLINIAKDILQPMIVSAVLENESIQGLSSVKPMGYRKYSSNSAEGDNSYSLDEMIRQLNT
FHSIMCDQGLDPEIIQQVFKQLFYMINAMALNNLLLRKDVCSWSTGMQLRFNISQLEEWL
RGKNLQQSGAAQTLEPLIQAAQLLQLKKKTSEDAEAICSLCTSLTTQQIVKILNLYTPVN
EFEERVTVAFIRNIQKQLQERNDPPHLLLDFKHMFPVLFPFNPSAITMDSIHLPASLNLD
FLNKV
NT seq
5778 nt
NT seq
+upstream
nt +downstream
nt
atgcggtccttagaaacacagaatcgcacaggggaggcttgtgtcgggagagatctttgc
cgattgacctgtcccgatgaaagagctcctggcagggagtacgagatccgcctggagctc
tctcggatgtggagggagccctctcgttgtgctccgcatcttcgcggggctgcctgggca
gtgtgctcggtcaaagccatcaataacgcggggcaggaggagtgctgggctgcagggaag
gttttaccgtgttacactagggtttggattcctgaccctgatgaagtttggagatcggca
gaaattatcaaggattacaaagagggagataaaagcctccagctgaaacttgaagatgaa
actctctacgagtaccccattgacctgcaggggaacgagctgcccttcctacgcaatcca
gacatcctggtggggcagaatgacctgacagccctgagctacctgcacgagcctgcagtc
ctgcacaacctcaaagtcaggttcctcgagtccaaccacatctacacctactgtggtatc
gtgctggtggccatcaacccctatgagcagctgccaatctacgagcaggatgtcatctat
gcctacagcggccagaacatgggggacatggacccccacatcttcgccgtggccgaggaa
gcctacaagcagatggccagggatgaaaagaaccagtccatcatcgtgagcggggagtcg
ggggcaggcaagacagtctctgccaaatacgccatgcgcttcttcgccaccgtcgggggc
tccgccagcgagaccaacatcgagaccaaagtcctggcctccaaccccatcatggaggcc
attggaaatgctagaacaacaaggaatgacaacagcagccgctttgggaaatacattcag
attggctttgataaaagataccacataattggtgccaacatgaggacatatctgctggaa
aaatctcgggttgtatttcaggcagaggacgagcgcaactaccacatcttctatcagctc
tgtgcctcctcaagccttccagaattcaaagaccttggactcacatgtgccgaagacttt
ttctacacttctcagggaggggacacgtccatcgatggcgtggacgatgctgatgacttt
gagaaaaccaggcatgccttcaccctgctcggagtgaaggagtctcatcagatgaccatt
tttaggataattgctgccattctgcacctggggaacttggaaatccaagggcagcaagat
ggggaagcctgcagtgtgtcgagcgaggacaagcacctgagcaacttctgcagcctgctg
ggtgtggagcacaaccagatgcagcactggctctgccaccgaaagctcgtcaccacggcc
gagacctacgtgaagaacatgtccctgcaccaggtggtgaacgccaggaacgccctggcc
aagcacatctatgcccagctcttcagctggatcgtgcagcacatcaacaaggctctgcac
agcactgtgaggcagcactccttcatcggcgtgctcgacatctacgggtttgaaactttt
gaagtgaatagctttgaacagttctgtatcaactatgccaacgaaaagctccagcaacag
ttcaactcgcatgtgttcaagctggagcaggaggagtacatgaaggaggggatcccttgg
actctcatagacttctatgacaaccagccctgcatagacctgatagaggcgaagcttggg
atcctggacctgctggatgaagagtgcaaggtgcccaaaggcacagaccagaactgggct
cagaagctgtacgaccgccatgcctccagccagcacttccagaaacctcgcatgtccaac
acctccttcatcatcctgcactttgctgacaaggtggagtaccagagcgaggggtttctg
gagaagaacagggacaccgtgtatgaggagcagatcaacatcctgaaagccagcaagtat
cagatggtagcagacttattccaggaggaggacgctgtgcccactgctgccacgccaaag
ggaacatcccggatcagtgtccgctctgccaggccagccttcaaaactgccaacaaggag
cacaggaaaacagtgggacaccagttccgcaactccctgcacctgctgatggagaccctg
aatgccaccaccccgcactacgtgcgctgcatcaagcccaacgatgagaaactccccttc
aagtttgatccgaaaagagcggtgcagcagctgagagcctgtggggtgctggagaccatc
cggatcagtgcagctggcttcccatccaggtggtcctaccctgactttttcaacaggtac
cgtgtgcttatgaacaagagagaccttgctaagcaagacaagaagaagatctgtcagacc
ctgttggaagatctcattaaggatccagacaagttccagtttggccgtaccaagatcttt
ttccgtgcaggccaggtggcatatctggagaaactgcgggcagataagttcagggctgcc
actatcatgatccagaagacagtgaggggctggctgcagagggccaagtaccagaggctg
agacgagccaccctcgccctgcagcgctatgcccgcgggcacctggcacgcaggcttttt
gagaacctgaggaggacgagggctgccatcatcttgcagaagcagtaccgaatggtgcgg
atgcaccgggctttcctgagggtccgcaaagccaccctcaccatccaggcttttgctcgg
ggcatgtttgtcaggaggatttaccaccagatgctgatggagcacaaggccaccatcctg
cagaagtacgcccggggctggctggcccgtgtgcggctccgccgggcccaggccgctgcc
gtggtgctgcagtgccactggcggcgcctccgggcccggcgccagctccaggccctccgc
atcgaggcacgctcggcacagcacctcaagaagctcaatatcggcatggagaacaaagtg
gtgcagctgcagaggaaggtggatgagcagaacaaggagaacaagcttctgaatgagcag
ctgtccatgctgacatcagcccactcctctgaggtggagaagctgaagaaggagctgcag
cagtacgagcggtgccagcggggtgatggcaaccagctcctcagcctgcaggaggagatg
gagcggctgcggatggagctggagagggctcatggggagagggaggtcatggaggacagc
cacggcaaggagagggacctgctgaggaagcgtatctccgacctggaagaagaaaacact
ctcctgaagcaggaaaaagaggagctgaacaacaggattctctgtcagtctgaagatgaa
tttgcacgaaacacagttgaggaaaatatccagatgaagaaagagctggaagaagagaga
tcccgttatcagaacctggtaaaagagtatgcagctctggagcagagatatgacaacttg
agggatgaaattactattattaagcaaacaccagggcacagaagaaacccatccaaccag
agcagcttggagtctgattccaataacccatccatctgcacctctgagatcggggacacc
gaggatgtgatacagcaggtggaggagattgggatggagaaagcagccatggacatgact
ctcttcctaaagctacagaagcgagtgagggagcttgagctggagaggaagaagctgcaa
gcccagctggagaaaaaggagcaagagagcaagaaatcccagataattgaaacaaagact
gaagtggcttcggaacatgaagattttgcatacaacagcctgaagaggcaagagctggag
tcagagaacaagaagctgaaaaatgagctcaatgagctgaggaaggccattgcagaccat
gccacgcagaacagctcctccaacgatgtgcaggacagctacaacctccttctgaaccag
ctgaaatcggccaacgaggagctggaggtgcgcaaggaggaggtgctcatcctcaggtcg
cagatcatgaaggcagcccagcaaaaagagacggggaaaaacatggtaaaggagagggag
agcatctcccccagtgccagctggcccaacagtgaccggcacattgaccaggaggacgcg
atcgaagcctaccagggcatgtgtgagaccaaccgcaagactgaggactgggggtatctc
aatgaagatggagagctcggcttggcttatcaaggtttaaagcaagttgccaggttgctg
gaagcacagctccaggaccagagaagggagcatgaggaagagatggaagctctgaaaaac
caggtggatttaatgcaagaggagctggagaagcagcaacaggcattcctgcagactctg
cagctctctccagaggtccaggtggagttaggacttcagcaagaaattacacgtctgacc
aatgaaaacctggatcttaaagaattgctggaaaagttggaaaagaatgaaaagaagctg
aagaagcagctgaagatttacatgaagaaagtccatgattttgaagcatcccaggccatg
gtgccagtggagaggagattgcacgagcggaacatgcaggttgctgtccagaggaaggag
aagaattttcagggcatgctggaatattacaaagaagatgagccactcctcatccgaaat
ctcgttacagatctcaagccccaagcagtgtctgctactgttccctgccttcctgcttac
atcctcttcatgtgcatcagacatgcagattacatcaatgatgaccagaaggtgcactcc
ttgctcacctccaccatcaatggcgttaagaaagtgatgaagaagcaccacgatgacttt
gagatgacatcgttctggctggcgaacacatgccgcctcctgcactgcctgaagcagtac
agtggggaagtgggtttcatgacccaaaacacagcgaagcagaatgagcactgcctgaag
aatttcgacctgactgagtaccgccaggtgctgggtcacctctccatccagatctaccag
cagctcatcaacattgccaaggacatcctgcagcccatgattgtgtctgctgtgttggaa
aatgagagtatccaagggctttccagtgtcaaaccgatgggctacaggaaatactcctcc
aactcggcagaaggtgacaattcctacagcttggatgaaatgattcgccagctgaacaca
ttccacagcatcatgtgtgaccagggcctggacccagagatcatccagcaagtgttcaag
cagctcttctacatgatcaacgccatggccctgaacaacctcctgctgaggaaggatgtc
tgctcatggagcacgggcatgcagctgaggtttaacataagccagctggaggaatggctg
cgtgggaagaacctgcagcagagtggagcagcacaaactttggagcccttgattcaggca
gcacagctcctgcagctgaaaaagaaaacctcagaggatgcagaggccatctgttccttg
tgcacatcactaacgacccagcagattgtaaagatacttaatctctacactcctgtgaat
gagtttgaagaacgtgtgacagtagctttcatacgaaacatacagaagcagttgcaagaa
cggaatgaccctccacatctgctgttagacttcaagcacatgttcccagttctgttccca
ttcaacccatctgccatcaccatggactccattcatctccctgcttctctcaacttggat
tttctcaataaagtctga
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integrated database retrieval system
