Cinclus cinclus (white-throated dipper): 134057147
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Entry
134057147 CDS
T10813
Symbol
HNRNPA1
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1 isoform X1
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134057147 (HNRNPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccic03019
]
134057147 (HNRNPA1)
03041 Spliceosome [BR:
ccic03041
]
134057147 (HNRNPA1)
Messenger RNA biogenesis [BR:
ccic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
134057147 (HNRNPA1)
mRNA cycle factors
Common to processing body (P body) and stress granule
134057147 (HNRNPA1)
Spliceosome [BR:
ccic03041
]
Common components
Common spliceosomal components
hnRNP proteins
134057147 (HNRNPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
HnRNPA1_LC
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
134057147
NCBI-ProteinID:
XP_062370156
LinkDB
All DBs
Position
Unknown
AA seq
440 aa
AA seq
DB search
MERRRRAASTNGRRRGGREGGGGGGVRRRRSRRSAPFRVGPRRGSIARCRHRPARPAPRR
AAAMAKAESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGF
GFVTYSSVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTE
EHHLREYFGQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEV
RKALSKQEMASASAGQRGCALPPPPPPPPLLGRSGSGNFGGGGRGGFGGGDNFNRGGNFG
GRGGFGRAGAYGGDGFNGFGADGYGGGGGPGYSGGNRGYGGSGSYDGYNNGGGGFGGGSG
GRRPARGPALAVRNGLAEAGTGSNFGGGGSYNDFGSYNNQASSFGPMKGGSFGGRSSGPY
GGGGYGSSSGGGSYGGGRRF
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggagaggcggcgccgggcggcgtcaaccaatgggaggcggcgcgggggccgtgagggc
ggcgggggcggcggggtgaggcggcggcgctcgcgtcgctcggcccctttccgtgtcggc
cctcgcagagggagcatcgcgcgctgccgccaccgcccggcccgccccgccccgcgccgc
gccgccgccatggccaaggccgagtccccgaaggagccggagcagctccggaaacttttc
atcggcggcctgagctttgaaaccacagacgagagcctgcgcagccacttcgagcagtgg
ggcaccctcactgactgcgtggtgatgcgggaccccaacacaaagcgctcgcggggcttt
gggttcgtcacctactcctcggtggaggaggtcgatgctgccatgaatgcacggccacac
aaggtggatggcagggtggtggaacccaaacgggccgtgtcccgagaggactcgcagcgg
cccggggcgcacctgacggtgaagaagatcttcgtgggcggcatcaaggaggacacggag
gagcatcacctgcgggagtacttcgggcagtacggcaagatcgaggtcatcgagatcatg
accgaccgcggcagcggcaaaaagcgcggcttcgccttcgtcaccttcgacgaccacgac
tcggtcgacaaaatcgtcatccagaagtaccacacggtgaacgggcacaactgcgaggtg
cgcaaggctctgtccaagcaggagatggccagcgcctcggccggccagcgaggctgtgcc
cttcctcctcctcctcctcctcctcctctcctaggccgcagcggctccgggaatttcggc
ggcggcggccgcggcggtttcggcggcggcgacaacttcaaccgcggcggcaacttcggc
ggccgtggtgggtttggccgcgccggcgcttacggcggcgacggatttaatggatttggc
gctgacggttacggcggcggcggcggccccggctactccgggggcaaccggggctacggc
ggcagcggctcctatgatggctacaacaacggcggtggtggcttcggcggcggcagcggg
ggccggcggccggcgcggggaccggcgctggccgtgcgcaacgggctggctgaggcgggc
acaggcagcaatttcgggggcgggggcagctacaatgactttggcagctacaacaaccag
gcctcgagtttcgggcccatgaagggcggcagcttcggggggcgcagctcggggccctac
ggcggcggtggctacggcagttccagcggcggcggcagctacggaggagggagaaggttt
taa
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