Cinclus cinclus (white-throated dipper): 134057160
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Entry
134057160 CDS
T10813
Symbol
SNRPD2
Name
(RefSeq) small nuclear ribonucleoprotein Sm D2
KO
K11096
small nuclear ribonucleoprotein D2
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134057160 (SNRPD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccic03041
]
134057160 (SNRPD2)
03032 DNA replication proteins [BR:
ccic03032
]
134057160 (SNRPD2)
Spliceosome [BR:
ccic03041
]
Complex A
U1 snRNP components
Sm proteins
134057160 (SNRPD2)
U2 snRNP components
134057160 (SNRPD2)
Complex B
U1 snRNP components
134057160 (SNRPD2)
U4/U6.U5 tri-snRNP components
134057160 (SNRPD2)
Complex C
U2 snRNP components
134057160 (SNRPD2)
DNA replication proteins [BR:
ccic03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
134057160 (SNRPD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
GIT1_C
Ldh_1_C
Motif
Other DBs
NCBI-GeneID:
134057160
NCBI-ProteinID:
XP_062370181
LinkDB
All DBs
Position
Unknown
AA seq
118 aa
AA seq
DB search
MSLLNKPKSEMTPEELQKREEEEFNTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFD
RHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVLRNPLIAGK
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgttgaacaagcccaagagcgagatgacccccgaggagctgcagaagcgcgag
gaggaggagttcaacacgggcccgctgtcggtgctgacgcagagcgtcaagaacaacacg
caggtgctcatcaactgccgcaacaacaagaaactgctgggccgcgtcaaggccttcgac
aggcactgtaacatggtgctggagaacgtcaaggagatgtggaccgaggtgcccaagagc
ggcaaaggcaagaagaaatccaaacccgtcaacaaggatcgctacatctccaagatgttc
ctgcgcggggactcggtcatcgtggtcctgaggaaccccctgatcgccggcaagtag
DBGET
integrated database retrieval system
