Cinclus cinclus (white-throated dipper): 134057587
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Entry
134057587 CDS
T10813
Symbol
TRIM41
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM41 isoform X1
KO
K12017
tripartite motif-containing protein 41 [EC:
2.3.2.27
]
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccic04121
]
134057587 (TRIM41)
Enzymes [BR:
ccic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134057587 (TRIM41)
Ubiquitin system [BR:
ccic04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
134057587 (TRIM41)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
RING_XB3-XBAT31
Nop14
zf-RING_2
zf-C3HC4_3
zf-RING_6
zf-RING_5
Sina_RING
TRAF3_RING
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
134057587
NCBI-ProteinID:
XP_062370559
LinkDB
All DBs
Position
Unknown
AA seq
630 aa
AA seq
DB search
MAAPAALGGPGSRPDPVETLQEEAICAICLDYFADPVSIGCGHNFCRGCISRLWARGGPE
PPTGGSEGGSELEEDEDEDELEEDELDVEQEEEEDVAGVDEEEDDDMWEEEEEEEEEEAE
LWEDPAEDEEEEEEEEATAWAGGAQGGLYFGDEDYDEDVMEEDVEEEEEEEAEEEEEEDE
EERPPPPASPRRPPVFTCPQCRKTFLQRSFRPNLQLANMVQIIRQLHPRPQRPAGPGPGP
APAPGGPPELCEKHQEPLKLFCEVDEAAICVVCREARGHKHHSVVPLDEVVQDCKNKLQS
HLEPLRKQLDAVLKQKSSEEEKISVLKEQMQVEMQELEADFEVLHRFLAGEQVLLLRQLQ
ERHEALLARQRRNLGALEERSSALRRLIGDAEAAGRQDGLQLLKDIKGTFIRCENIKFQE
PEMVPVDVGKKFRNCFLQDVVMRKMEKVFSKVPQADVTLDPSTAHPRLSLSLDRRSVRLS
ERRQEPAGSARRSDGDLCVLGAPGFSAGRHYWEVEVGGRRGWAVGAARETTRHRHKGASG
GSSAAPKREIWAVGTSGKKYQALTATEQTALAPGEQPRRFGVYLDYERGQLCFYNAESMS
HIHTFHICCRERVFPFFRILAKGTRIKICT
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccccgcggcgctgggcggccccggctcccggccggacccagtggagacgctg
caggaggaggcgatttgcgccatttgcctcgactacttcgccgacccggtgtccatcggc
tgcggccacaatttctgccgcggctgcatctcccggctatgggcccgcggcggccccgag
ccccccacgggcggctccgagggcggctccgagctggaggaggacgaggacgaggacgag
ctggaggaagatgagctggacgtggagcaggaggaggaggaggacgtggccggcgtggac
gaggaggaagacgacgacatgtgggaggaggaggaggaggaggaggaggaggaagccgag
ctctgggaagaccccgcggaggacgaagaggaggaggaggaggaagaagccacggcatgg
gcggggggcgcgcagggggggctttacttcggggacgaggactatgacgaggacgtgatg
gaggaagacgtggaggaggaggaggaggaggaagcggaggaggaggaagaggaggacgag
gaggagcggccgcctccccccgcgtccccccggcgccccccggttttcacgtgcccccag
tgccgcaagacgttcctgcagcgcagcttccgccccaacctgcagctcgccaacatggtg
cagatcatccggcagctgcacccgcggccccagcgccccgcggggcccgggcccggcccc
gccccggcgcccgggggcccccccgagctgtgcgagaagcaccaggagccgctgaagctg
ttctgcgaggtggacgaggcagcgatctgcgtggtgtgccgggaggcccgagggcacaaa
caccacagcgtggtgcccctggacgaggtggtgcaggactgcaagaacaagctccagagc
cacctggagccgctccggaagcagctggacgcggtgctgaagcagaaatccagtgaggag
gagaaaatctccgtgctgaaggagcagatgcaggtggagatgcaggagctggaggcggat
ttcgaggtgctgcaccggttcctggcgggggagcaggtgctgctgctgaggcagctgcag
gagcgccacgaggcgctgctggcgcggcagcggcgcaacctgggggccctggaggagcgg
agctcggcgctgcggcgcctcatcggcgacgccgaggctgcgggccggcaggacgggctg
cagctgctcaaggacatcaaaggcaccttcatcaggtgcgagaacatcaaattccaggag
cccgagatggtgcccgtggatgtggggaagaagttccggaattgtttcctgcaggatgtg
gtgatgagaaagatggaaaaggtcttcagcaaagtgccccaagccgacgtgaccctggac
ccctccaccgcccaccctcggctcagcctgtccctggaccggcgcagcgtccgtctgtcc
gagcggcgccaggagcccgcgggcagcgcccgacgctcggacggcgacctgtgcgtgctg
ggagcgccgggattcagcgccggccgccactactgggaggtggaggtgggcgggcgacgg
ggctgggccgtgggggccgcccgcgagaccacccggcaccggcacaagggagcgtccggc
ggctcctcggcggcgcccaagcgcgagatctgggccgtgggcaccagcgggaagaagtac
caggcgctgacggccaccgagcagacggcgctggcgcccggggagcagccgaggcgtttc
ggggtctacctggactacgagaggggccagctgtgcttctacaacgccgagagcatgagc
cacatccacaccttccacatctgctgccgcgagcgcgtcttccccttcttccgcatcctg
gccaagggcacccgcatcaagatctgcacctga
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