Cinclus cinclus (white-throated dipper): 134057736
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Entry
134057736 CDS
T10813
Symbol
THSD1
Name
(RefSeq) thrombospondin type-1 domain-containing protein 1 isoform X1
KO
K24433
thrombospondin type-1 domain-containing protein 1
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ccic04990
]
134057736 (THSD1)
Domain-containing proteins not elsewhere classified [BR:
ccic04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
134057736 (THSD1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THSD1_D2
THSD1_D3
THSD1_N
TSP_1
TSP1_spondin
TSP1_ADAMTS
TSP1_CCN
AJAP1_PANP_C
TSP1_CFP_C
Motif
Other DBs
NCBI-GeneID:
134057736
NCBI-ProteinID:
XP_062370717
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All DBs
Position
2:complement(54544074..54564203)
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AA seq
852 aa
AA seq
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MKQMLKDFSNLLLVVLCDYVLGEVEYLLLEHPDHVAFSNDTVSVEYQYYSGGNVTAEPVS
ILLLDASTSEIIARKLLPANQSQGTVVFECFHFKSAGDFLFRMVSPSDNSSAAQWSRSSM
STLHVEWPVFHIDLNRSSEVLGTSLQVGLFTNEQLCAMNKTLISLDVIFTSTLYEFRRVS
SDETLGIRTSKGIPLSRSQWVEFDCPPIGQEIYITVLLKSLETHSIIASIGPVDLLHKFG
YRLVVAAEPTCKTLVQVFVISPPCTSISGKIVAYKEALKHPSQRTAWLYENILHPGDNRT
EFNCTLFDVGKNKYCFDLLSFSNRSYFPARVKECVLIQRNMETWSRWQPWSPCSVTCGDG
IRERFRECLTSSPAKPGCAGSPRETSLCSLEECVSVQPPTPPSVQPGEDQKANNIVTITG
ISLCLFIIFATVLITLWRKLCRAQKCSTAVRRNSVHSPGFRKNSDEENICQGNKQRDSFA
EGGNAPVNIPLTYRRSLQFAQEDDASGSENFQPNAQKIIPPIFSYRLAQQQLKEMKKKGL
TETTKVYHVSQNPLTDTVLGATTMLPLSGENQEEADGNKFRIKSPFLDQPASQPKFLGEG
CHPRLDLPFSQANTAMSPTQTLVRRGHFKHQDNRVDLPERGCHRNSQFRRTASFHETKKA
RPFRERSMSTLTPRQTPLYNSRTRTWDHGLEDRTRPKSRNTNPACEKLDQPHSTVVGCEP
QGHGAKLHHRAGPPVRKLDLVTDHQPAGQERAAEKPEPSRSKRGPSPNPKGVWQKETGSN
GKDISQRGQSVSPAQYRRDKCQSFPLDPEFAFYDNSTFGLTEAEQQMIDLPGYFGSNEED
ETSTLSIEKLVI
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgaaacagatgttgaaagatttttcaaatctgttgttagtagttctctgtgactatgtt
ctcggcgaagtggagtatctcctgttggagcacccggatcatgtagccttcagcaatgac
acagtgtcagtggaatatcagtactacagtggtggtaatgtgacagcagagcctgtatcc
atccttttactggatgccagcaccagtgagataattgcaagaaaactgcttccagcaaat
cagtcccaggggacagtggtgtttgagtgtttccatttcaagagtgctggtgatttcttg
ttcagaatggtctctcccagtgacaacagtagtgctgcccaatggagcagaagcagcatg
tccaccctccatgtggaatggcctgtatttcacattgatttgaacaggagttcagaggtg
cttgggacctcccttcaggttggactttttacaaatgagcagttatgtgccatgaacaag
actttgatttcactggatgtgatattcaccagcaccctttatgaattcagaagagtaagc
tctgatgagactctaggcattagaactagcaaaggaatccccctgtctaggtcccagtgg
gtagagtttgactgcccacccattggtcaagaaatatacatcactgtattactgaaatcg
ttagaaacacattccatcattgcctccataggacctgtagatctgcttcacaaatttgga
tacagactggttgtggcagcagaacctacatgcaaaactttggttcaggtctttgtaatc
tctccaccatgcacttctatcagtggaaaaattgttgcttataaagaggctctcaagcat
ccgagtcaaagaacagcttggctgtatgaaaacatccttcacccaggggacaacaggaca
gaatttaactgcactttgtttgatgtggggaagaataaatactgctttgacctcctcagt
ttctcaaaccgaagctactttccagcaagagttaaggagtgtgtgctgatccaaaggaat
atggaaacgtggagccggtggcagccctggagcccgtgcagtgtcacctgtggggacggc
atccgggagcgcttccgagagtgcctcacctcctcgccggcaaaaccaggctgtgctgga
tcaccgagggagacttccctgtgctcgctggaggagtgtgtgtctgtccagcctcccacc
ccaccttctgttcagccaggagaggaccagaaagcaaataatatagttaccatcacaggt
atctcgctgtgcttgttcattatctttgccactgttcttatcaccctctggaggaagctg
tgcagagctcagaaatgcagcactgctgtccgacgaaactctgtccattcccctggcttc
cggaaaaactctgatgaggagaacatctgccaaggcaacaagcaacgggacagctttgct
gaaggagggaatgcccctgttaacattcctctaacctacaggcgaagcctccaatttgcc
caagaagatgatgcctctgggagtgaaaactttcagccaaatgcccaaaaaataatccct
ccgattttcagctatcgcctggcccaacaacagctgaaagagatgaagaagaaaggcctg
acggaaaccactaaggtgtaccatgtctctcagaatcctctcacggacacggttcttggt
gccaccacaatgcttcccctgagtggggaaaaccaagaggaggcagacggaaacaaattt
cggatcaagtctccatttctggaccagccagccagtcagcccaagttcctgggagaaggc
tgtcaccctaggctggatcttccattctcacaggccaatactgcaatgagccctacccaa
accttggtaagaagaggtcatttcaagcaccaggataacagagtggacttgcctgagagg
ggctgtcacagaaactcgcagttcagaagaacagccagtttccatgaaactaagaaggcc
aggcctttcagagagagaagcatgtccactctcacaccccgacagactcccctctataac
tccaggaccaggacatgggaccacggtctggaggacaggacacggccaaaatcacgaaac
actaatccagcttgtgaaaagctggatcagccccacagcactgtggtggggtgtgaacca
cagggccatggtgcaaagctgcaccacagggcgggtcccccggtgaggaagctggacctg
gtcacagaccaccagcctgctggtcaggagagggcagctgagaagcctgagcccagccga
agtaagaggggcccttcacctaaccccaaaggtgtgtggcagaaagaaacaggctcaaat
ggcaaagatatttcccagagaggccaaagtgtcagccctgcccagtatagaagggacaag
tgtcagagcttccccttggaccctgagtttgccttttatgacaattctacttttggctta
acggaggcagagcagcagatgattgacctccctgggtattttggctcaaatgaagaagat
gaaacaagtactctgagcattgagaagctggtgatctga
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