Cinclus cinclus (white-throated dipper): 134057913
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Entry
134057913 CDS
T10813
Symbol
AFF3
Name
(RefSeq) AF4/FMR2 family member 3
KO
K15195
AF4/FMR2 family member 3
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccic03021
]
134057913 (AFF3)
Transcription machinery [BR:
ccic03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
134057913 (AFF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
BRD4_CDT
Motif
Other DBs
NCBI-GeneID:
134057913
NCBI-ProteinID:
XP_062370939
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All DBs
Position
2:complement(87262484..87526769)
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AA seq
1263 aa
AA seq
DB search
MLVSFVRRIKPEMCKPGSVYEPDRNVLRRKEWERRNQEAQQDNSAFNTSYSLFSEPYKTN
KGDELSNRIQNTLGNYDEMKDLLTDRSNQSHLVGVPKPGVPQTSLPKADEHLIADSRPPP
APPISSTTSTPASLAAQQSKSTTMGWQKAGHNATSDGQQRASKHGHRSLESHKGDFKLAN
QKSNLEKLKRYASSPTSSSSSSSSSSSSSSSSSSSSSSSISSSSSSSSSNTAQQSSLRAT
LGDNISRVQQPAKLSCSSEGGTQVQERPAKHGGGHCVQNFPPSLAPKPSLGQQKPTAYVR
PMDGQDQAPDESPKLKLPAETTKSYRGVPSSKSDSARTKSKITKFSIPKQEEDSGTGDNS
CIEEILREMTHSWPPPLSAIHTPGKAEQSKFPFPNKESQQGPTGHSNTRKSDVEPKTPEK
SATHASMLEDDLKLSSDEEENDQQAAQRSALRVLSDSLVVPQPNARASGLSSKGSSSSSS
SESETSSESDSESESSSSESDGSKPSHYSSPEPEPPSSNKWQLDKWLNKVTPHKAPILTH
HDGPALEAHPYYGRAKVERQEGQKTPAEGPAEHRSEENRTAGTAGTATAVGDGPRPRTAN
KAPGSKGSRQKSPLAADGGPPRRAAGKKAPRRADRNSAGDGPPCPSAEELPRSHGFPESA
AGEAPRARPGGGGCRAGHRREPRSAAAGEKRRARGPSKTAPKSKEFIETESSSSSSSSDS
GSESEREERPLPKVPAAAGPEPRGAKDAGTGTASKPHGGCSAFGSINARTSSEIAKELEE
QFYTLVPFGRNELLSPLKDSDEVKSLWVNIDLALLSRIPERLPEEPLAMSAGANQAASFP
QGSSAEPPAEKGLPKSRRKRKCENEEECRDIKKTHLERESSSRLAASAQSITTANHCNTN
ENGLAIPINKNEKMLRSPVSPLSDASKHKYSNDDLTSSSRPNGSSLLPSISSSKKHKGEI
QSQPHPGDFNKAIHINSENVILCNKPQFQTEPWSPLSITPRDCRRTKLIFDDIPRNADYF
MQEAKRKKHKADAMVEKFGKALNYAEAALSFIECGNAMEQGPMESKSPYTMYSETVELIR
YAVRLKTHSGPNATPEDKQLAALCYRCLALLYWRMFRLKRDHAVKYSKALIEYFKNSSKA
AQNPSPWGASGKSTGTPSPMSPSPSPVSSVGSQGSTGAPSPSPIISIPQRIHQMAANHVS
ITNSILHSYDYWEMADNLAKENRDFFNDLDALMGPITLHSSMEHLVQYTQQGLHWVRNSA
HLS
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atgttggtttcctttgtgaggagaataaaacctgaaatgtgtaaacctggaagtgtctat
gagccagacagaaacgtgctgcgaaggaaagaatgggagaggagaaatcaggaggcccag
caggacaacagcgcgtttaacacgagctattccctcttcagcgaaccgtacaagactaac
aagggggatgagctttccaatcgcatccagaatacgttgggcaactatgatgaaatgaaa
gacttgttaactgaccggtcaaaccagagccatcttgttggggttccaaaacctggggtt
cctcagacatctctccccaaggctgatgaacatcttatcgcagactcaagaccaccacct
gctcctcctatttccagcactacttccacaccagcatccctagctgcccagcagagcaaa
agtaccacgatgggctggcagaaggctgggcataatgccacttcagatggccagcagaga
gcaagcaaacatggacacagatcgctggagtcacacaagggtgacttcaaactggcgaac
caaaaatccaatttggagaaactaaaacgctatgcatctagtcccacctcctcctcctcc
tcctcctcctcctcctcttcctcctcctcttcttcttcttcttcctcttcctcctccatc
tcttcctcctcctcctcctcttcctccaatactgcccagcaaagctcactgagggccaca
ttaggagacaatatcagtagagtccagcagccagcgaagctcagttgtagctcagaagga
ggaactcaagtccaagagaggccagcaaagcatggtgggggacactgcgtccaaaacttc
ccaccctctcttgctccaaagcccagtctgggtcagcagaagccaacagcttatgtaagg
ccaatggatggtcaagaccaggctcctgatgagtctccaaaactgaagttaccagcagag
acaaccaagtcatacaggggagtgccttccagcaagtctgattcggccaggaccaagtca
aagatcaccaagttcagcattcctaagcaagaagaagacagtggaacaggagataacagc
tgcattgaagaaatattgcgggagatgacccattcatggcctccgccactgtcagctatt
cacacaccaggaaaggcagaacaaagcaagtttcctttcccaaacaaggagtcacaacag
ggacctacaggacacagcaatacaaggaaaagtgatgtagagccaaagaccccagagaaa
agtgcaacccatgcatcaatgctagaagatgacctcaagttaagcagtgatgaagaggag
aatgaccagcaggcagcacagagatctgctctccgcgttctatctgacagcctggtggtg
ccgcagcccaatgcccgagcctcgggactctccagcaaggggtcgagcagcagcagctcc
agtgaatctgagaccagctctgagtctgactccgagagcgaaagcagctccagcgagagt
gacggcagcaagccctcgcattactccagcccagagcccgagccgccctcgtccaacaag
tggcagctggacaagtggctgaacaaagttacccctcacaaagcacccatcctaacccac
cacgatggcccggcgctggaagcccatccctactacggccgcgcgaaggtagagcggcag
gaaggacagaagaccccggctgagggcccggccgagcaccgcagtgaggagaaccgcacc
gccggcaccgccggcaccgccaccgccgtcggggacgggccgcggcccaggaccgccaac
aaagcaccaggcagcaagggcagccggcagaaatcacccctcgctgccgacggcgggccg
ccgaggcgggcagcggggaagaaggcaccgcggcgagccgacaggaactccgccggagac
ggccccccctgccccagcgcagaggagctcccccggagccacggcttccctgaaagcgct
gctggcgaggcgcccagggcccggcccggcggcggcggctgcagagcggggcatcgccgg
gagccccgctcggccgcagccggtgagaagcgtcgggcacgagggccgagcaaaacggcg
cccaaatccaaggagttcatcgagaccgagtcttcatcctcatcatcctcctccgactca
ggctctgagtcggagcgggaggagcgcccgctgcccaaggtgccagcggcagccgggcct
gagccgcggggtgccaaggacgcggggaccggcaccgccagcaaaccccacggcggctgc
agtgcctttggctctattaatgccaggactagtagtgaaatagcaaaggagctggaggaa
cagttttacaccctggttcctttcggtaggaatgagctcctgtctcctctgaaagacagt
gatgaggtaaagtcgctgtgggtcaacattgacttggctcttttgtccaggattccagag
cgtttgcccgaagaaccgctggccatgagcgccggagcaaaccaggcggccagcttcccg
cagggtagtagtgctgaaccccccgcagagaagggtttaccgaaatctagaaggaaacgc
aagtgtgagaatgaggaagagtgcagagacatcaagaagactcacttagagagagagagt
tcttcacgattagctgcgtctgcccaaagcatcacaacagcaaatcactgcaatacgaat
gaaaatggcttggcaataccaataaataaaaatgagaaaatgcttcggtcacccgtctct
cccctctctgatgcatcaaaacacaaatattccaacgatgatttaacttcctccagcaga
cctaatggcagcagtctattaccttcaatctcctccagcaaaaaacataagggtgaaatc
cagtcacaaccacatcctggagacttcaataaagcaattcacatcaattcagaaaatgtt
attctctgcaataagccacagttccaaacagagccttggtcacccctgtccatcacaccc
agggactgcagaagaacaaagcttatcttcgatgatataccacgcaatgcagattacttt
atgcaggaagctaaacggaagaagcataaagcagatgcaatggtggagaagtttggaaag
gcactgaattatgcagaagcagcactatcatttattgaatgtggaaatgcaatggaacaa
ggcccaatggaatctaaatccccttataccatgtattcagaaacagttgaactcatcagg
tatgcagtgagactaaaaacccactcaggccctaacgccacaccagaagacaaacagctg
gcagcattatgttaccgctgcctggcccttctgtactggagaatgttccgactcaagaga
gaccacgcggtcaagtattcaaaagcacttattgagtatttcaagaattcatcaaaagct
gcccagaacccatctccttggggtgccagtggaaagagcacaggaactccatcacctatg
tcccctagcccttctccagtcagttctgtaggatcccaggggagcacaggggctccttcc
ccatctcccatcatcagcatcccgcagcgcattcatcagatggctgccaaccacgtcagc
atcaccaacagcatcctgcacagctatgactactgggagatggctgacaacctggccaag
gaaaacagagatttttttaacgacttggatgcattgatgggacctatcaccttgcacagc
agtatggagcatttggttcaatacactcaacaaggacttcactgggtgcggaatagcgct
cacttgtcataa
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