Cinclus cinclus (white-throated dipper): 134057919
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Entry
134057919 CDS
T10813
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04510
Focal adhesion
ccic04512
ECM-receptor interaction
ccic04820
Cytoskeleton in muscle cells
Brite
Exosome [BR:
ccic04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
134057919 (COL4A2)
Glycosaminoglycan binding proteins [BR:
ccic00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
134057919 (COL4A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
134057919
NCBI-ProteinID:
XP_062370946
LinkDB
All DBs
Position
2:complement(93519981..93617766)
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AA seq
1682 aa
AA seq
DB search
MQGGKKYTGPCGGRDCSGGCQCFPEKGSRGQPGLLGSQGFTGPPGLMGIPGVQGPKGHKG
ERGYPGITGPKGEVGQRGVTGFPGADGIPGHPGQPGPRGKPGHDGCNGTAGDPGDLGIPG
VSGFPGSIGVQGPKGQKGEPYIVAPEIISRYRGDPGDSGFIGFPGPPGTLGIQGPIGPRG
QRGRPGPPGPPGPPGPQGNRGLGFYGEKGEQGPPGPPGPPGLPTRELMGVPSDKHKGERG
DPGPRGEAGIPGVLLFPLEKGEEGLVGHPGQRGLPGINGFPGLSGERGFPGFDGQPGGHG
PRGSKGEPGEMGPPGPDSYFPSRIPRKGVRGDPGFPGVSGLPGDRGDEGDRGLPGLPGFS
DGDGDKPGLPGEMGPKGEKGEIGSPAYYAGPPGLPGKDGSPGIRGPPGPAGAPGPLFGLK
GREGIPGRFGTQGFPGPRGQKGPKGEEGDCTTCLLSEELRRGPTGPRGPPGFPGTSGQPG
RKGEPGDQGPHGLPGYPGAKGFSGPAGFPGRKGEKGDSLHITTKGTKGIRGDPGLPGIRG
EDGFPGRDGLDGLPGQPGLPGDAIRGFPGDPGYPGELGPKGFPGEAGLPGEGFPGPKGFR
GPPGDQGQSGNPGSPGLPGLPGEPGQLDCGQVSEDFPRGDATEPIWSGAGCVRPPKGSQG
KPGVPGATGAKGARGFPGDPGPMGYPGLNGTRGDPGREGFPGPPGFTGPRGDRGPNGLPG
LQGHPGLTGKSGAPGAPGLKGLPGDVFGAAAGSRGDVGLPGFPGLKGAPGDQGVPGTRGA
DGSPGLPGPKGDPGSQGLPGLMGLPGTPGTHGFPGPPGNRGPDGGPGSQGPLGPPGARGE
DGEQGFPGPVGLKGLSGDKGDMGHTGLPGIRGVSGPPGISGMDGFPGDKGLRGSPGIDGF
KGMPGLKGRPGIKGIKGEFGPLGSRGDKGSQGARGFKGDRGDQGPPGEPPKLMPSMMMEV
KGEKGDAGERGTKGFFGLKGSKGMPGLPGKTGTPGSPGHPSYMAGVKGDIGAKGLTGVKG
YPGPTGSPGIRGFPGTTGVRGEKGIPGISGHFGTPGSHGEIGDRGDTINLPGMPGLKGEV
GVPGLTGIRGGVGPKGEGGDPGFPGIEGLKGTQGVPGSVGQEGLPGLVGAPGQQGSPGSP
GFPGEKGTPGWPGLPGQAGQPGLRGISGLHGLPGTKGLPGSPGPDGYGSAGFPGAVGDKG
EAGEPSRVEGSRGPPGQKGDRGVPGVPGPFGIPGQEGFPGPPGISNISGYSGDKGSPGLH
GVPGYPGPQGQPGIPAPPGSKGESGQTGRTGEIGPKGSRGDPGSAGRPGLPGFPGPKGPR
GEQGVIGFMGTVGFPGDLGPIGPKGDRGVTGFQGPPGSPGLPPLPPRLVAEQGSPGPRGN
IGPQGSPGDMGPQGPPGDPGFRGSPGEPGLQGRGGIPAPPGSRGEQGGMGFQGPVGFEGQ
PGRPGSPGPPGMPGRSVSMGYLLVKHSQSDQEPMCPVGMNKLWSGYSLLYFEGQEKAHNQ
DLGLAGSCLSRFSTMPFLYCNPGDICYYASRNDKSYWLSTTAPLPMMPVAEEDIKPYISR
CSVCEAPAVAIAVHSQEASIPHCPEGWRSLWIGYSFLMHTAAGDEGGGQSLVSPGSCLED
FRATPFIECNGARGTCHYFANKYSFWLTTIDQPFQSKPSGDTLKAGLIRSHISRCQVCMK
NL
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atgcagggtggaaagaaatacacaggaccatgtggaggcagagactgcagtggaggatgt
cagtgtttccctgaaaaaggaagccgtggccagccaggactccttggatcacagggattc
actggaccaccaggattgatggggatcccgggagtgcaaggtcccaaaggtcacaaaggt
gaaagaggatacccaggaataactggacccaaaggagaagtgggacaaagaggagtcact
ggattccctggggcagatggcattcctggtcatccaggccagccaggaccaagggggaag
ccaggtcacgatggctgtaatgggacagcaggtgaccctggtgacttgggaattcctgga
gtctctggtttccctggtagcattggagtccaggggcccaagggccagaagggagagccg
tacatagtggcgccggagatcatcagccgatacaggggagatcctggggattcagggttc
atcggttttccaggacctccaggtactctgggtatccaaggacctattggtccaagagga
cagcgaggaagaccaggaccaccaggacccccagggcccccaggaccacaaggcaacaga
ggccttggattctatggagaaaaaggtgaacagggccctccaggtcctcccggtccacct
gggcttcctacaagagaactgatgggtgtcccctctgacaaacacaagggtgaaagagga
gaccctggaccaagaggggaagctggaattccaggtgtgcttctctttcctctcgaaaaa
ggtgaagaagggctagtgggccacccgggacaaaggggactgcctggcatcaatggtttt
ccaggactcagtggtgaaagaggttttccaggatttgatggtcaacccggtggccatggt
cccagaggaagcaagggggagccaggcgagatgggtcctccagggccagattcctatttt
ccttcccgcatcccaaggaaaggtgtaagaggtgatccaggcttccctggtgtttctgga
ctcccaggagaccgaggagatgagggagatcgtggattgcctggtcttcctggattttct
gatggggatggagataagccaggcttacctggagaaatgggaccaaaaggtgaaaaaggt
gaaataggatctcctgcttattatgcgggaccacctgggcttccgggtaaggacggctca
ccaggaattcgtggtccacctggtcccgctggagccccaggtcctctctttggattaaaa
ggacgagagggaataccaggtagatttggtacacaaggtttccctgggccaagaggacaa
aaaggacctaaaggtgaagaaggggattgcactacatgccttttgagtgaggaactcaga
aggggccctactggtccccgtggccctcctggctttccaggaacctctggccagcctgga
aggaaaggagaacctggtgatcaaggaccacatggtcttcctggctatcctggagcaaaa
ggattttcgggtccagctggatttcctggacggaaaggcgaaaaaggagactctttacac
ataactacaaaaggcaccaagggaatccgaggggatcccgggctgcctggaatcagaggt
gaagatggtttcccaggcagagatggattagatggtttaccaggacagcctggccttccg
ggtgatgctatcagaggtttccctggtgatcctggttatccaggtgaattaggcccaaag
ggctttccaggagaagccggcctgccaggtgaaggatttcctggtccaaaagggttccgg
ggtcctccaggtgaccaaggacaatctggaaacccaggatctccaggtctgcctggtctg
ccaggagagcctggccaactagactgtgggcaggtcagtgaagactttcctagaggagat
gcaaccgagccaatatggtcaggtgcaggctgtgtaaggccaccaaagggatcccaagga
aagccaggagtgccaggagccacaggtgcaaaaggtgcaagaggattcccaggtgatcca
ggcccaatgggttacccagggctaaatggtacacgaggtgatccaggtcgggaaggattc
ccaggtcctccaggttttactggacccaggggagacagaggtccaaatggtctacctgga
ctgcagggacacccaggccttacaggaaaatccggagctccaggagcgccaggactgaag
ggccttcctggtgatgtttttggagcagcagcaggatcccgaggggatgtcggcctgccc
ggcttcccagggttgaaaggtgcaccaggagatcaaggagtaccaggaactagaggagcg
gatggtagcccaggtttgccaggaccaaaaggagatccagggtcacaaggtctccctggt
ttgatgggattaccaggaacaccaggaacacatggattccctggtccaccaggaaaccgt
gggccagatggtgggcctggctcccaaggacctctcggtccacctggtgctaggggagaa
gatggtgagcaaggttttcctggccccgtgggcctgaagggtctgtctggtgacaaaggt
gacatgggtcacacaggattaccaggtatacgtggtgtgtctggtccccctggcataagt
ggaatggatggctttccaggagataaaggcttgagaggctcacctggcattgatggtttc
aaaggcatgccaggcctaaaaggaagaccaggcatcaagggaatcaaaggagaatttggc
ccacttgggtctcggggagataaaggctcacagggtgcacgtggcttcaaaggtgaccgt
ggggatcaaggtcccccaggagaacctccaaagctcatgcccagcatgatgatggaagtt
aaaggtgaaaaaggagatgctggagaaaggggcacaaagggattctttggcttaaaaggt
agcaaggggatgccaggccttcctggaaagacaggaaccccagggtcccctgggcatccc
agctacatggctggtgtgaaaggagacatcggggcaaaaggactgacaggtgtgaaaggg
tatcctggtcccactggttctcctggcatcagaggcttccctggcaccacaggagtcaga
ggagaaaagggcattccaggaatttcaggccattttggtactcctggctcacatggagaa
ataggtgatcggggagatactataaatttaccaggaatgccaggccttaaaggagaagtt
ggtgtgccaggcttaacaggcataagaggaggtgtgggaccaaaaggagaaggtggtgat
cctggtttccctggcattgaaggcctcaagggcacacagggtgtccctggctctgtggga
caggaaggtttgccaggactggttggcgccccagggcagcaaggaagccctggctcacct
ggatttccaggggaaaagggaactcccggctggcctggtttaccaggacaagcaggccag
cctggcttaagaggaatcagtggactgcatggtttaccaggcactaagggcttaccagga
tcaccaggtccagatgggtatggctctgcaggtttcccaggtgcagtgggtgacaaagga
gaagcaggagagccaagcagagtggaaggcagccgaggacctccgggccagaagggagat
agaggtgtcccaggagtcccaggaccctttggtattcctgggcaggaaggatttccaggg
cctcctgggatttcaaatatatcaggatattctggtgataaaggctccccaggtctacat
ggagtgccaggctacccaggaccacaagggcagcctggaatacctgctccacctggaagc
aaaggagaaagtggacaaacaggtaggactggagaaattggcccaaaaggaagtagaggt
gatcctggatcagcaggaagacctggcctgcctggattccctggaccaaaaggtcctagg
ggtgaacaaggtgtcattggcttcatgggcacagtaggatttccaggtgatctgggacct
attggacccaagggagatagaggagtaactggcttccagggacctccgggctcccctggg
ctgccccctcttcctccaaggctggttgctgagcaaggttcaccaggtccccgtggaaat
ataggacctcagggaagcccaggagatatgggacctcagggcccaccaggagatccaggt
ttcagaggctcacctggagagccaggactccagggcaggggtggcattccggctcctcct
ggctccagaggggaacaaggaggaatggggtttcagggtccagtgggatttgaaggtcag
ccaggccgccctggtagccctgggccaccaggcatgccaggtcgcagcgtcagcatgggc
tacctgctggtgaagcacagccagtctgaccaagagccaatgtgcccagttggcatgaac
aaactctggagtggatacagcctcctctattttgaaggacaagagaaagcacacaaccag
gatctagggctggctggctcatgtctgtctcgttttagcaccatgccattcctctactgt
aaccctggggatatttgttactatgcaagtcgaaatgataaatcctactggctctcaact
acagcacctcttccaatgatgcccgtggcagaagaagacataaagccatatatcagtcgc
tgctcagtttgtgaggctccagctgtggcaattgctgtccacagccaagaagcttctatt
ccccactgccctgaaggctggcgcagtttgtggatcggatattccttccttatgcacact
gctgctggtgatgaaggtggaggacagtcgctggtttctcctgggagctgcctggaagat
ttcagggcgactcctttcatcgaatgcaacggcgcacgcggaacctgtcactactttgca
aacaaatacagcttctggctcaccacaattgaccagcccttccagagcaagccctcggga
gacacactcaaggcaggactcatccgaagccatatcagcagatgtcaagtctgtatgaaa
aatttatag
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