Cinclus cinclus (white-throated dipper): 134057961
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Entry
134057961 CDS
T10813
Name
(RefSeq) cohesin subunit SA-2-like
KO
K06671
cohesin complex subunit SA-1/2
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
134057961
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccic03036
]
134057961
Chromosome and associated proteins [BR:
ccic03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
134057961
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Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Motif
Other DBs
NCBI-GeneID:
134057961
NCBI-ProteinID:
XP_062370991
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All DBs
Position
2:complement(84577197..84631022)
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AA seq
1192 aa
AA seq
DB search
MIAEPNAASNLPSQKENAVHDETVPESAAQNGTCVRNGNLKTPREKRKVREQCENIRRNS
AGSRRVSQLQNGEVVEAVTLFEVVSMGKQAMQSVVVDWVEAYKQDRNVALLDLINFFIQC
SGCQGMVTAEMFQSLYKKDVMRKMTETFDKETGLQYKKFMAYPWILTVTWPVNMDNEDYP
LIRSGPYWKKFKANFCEFIAVLVQQCQCSILYDNYLMDTIISLLTGLADSMVRAFRHTST
LAAMKLLTAVVNVHLNLDINKHNAQRLYEVEKKRISGKRTSYRLDQLERKRKEYEHKLLE
IQNMMNAIFKGTFLNRYRDVIPEIRATCIEEIGSWIKTYPDAFLNDSYLKYVGWMLYDKQ
AEVRLKCLLGLQGIYSRKELASRMDLFTNRFKDRIVSMPLDKDHEVAVQAMKLLMLMSQN
CEDVLSAEDCEMLYQFVYTTHRPLAVAAGEFLYKRLLSHEGGKEVQPKGGGKFGVSTDQL
KRLIHFFLESELHKHVVYLVDSLWDWAGKFLKDWECMTTLLLKNAEEAGEALSDAQESTL
IEIMLASVREAAEGHPPVGRGAAKKILSIKEKKIQLEDCTKITEHFILVLPQLLAKYSTD
AQKVANLLQIPQYYDLNVYSTGRLEKHLDVLLREIKDIVAKHSDMSVLEASSRTYYILCH
EEIAIYSQVDCARTQMIDELIKHLNQLLDCFWQKEGGFCTDTGEISRMHSTLRRVAAFHN
AHDLTKWNLYDKILRFLMFEMEHGSLPVLIILPALQCTYFSLLWQLAAVSENSPKTLFPL
RRELRRFSQICTCFLHHKEKDVREKAFMILCDWLLILSHLDSNNNEDTVGILGYLPNTSL
QEKLFSFIQDHVFMDEEEEKKDLTEEGKDETCKLDDLHKKRSLLAAYCKLIVYNVVEMTA
AAEIYKYYVKTYSDFGDIIKETLSKMRYNNKIQSAKTLILCLQQLFQTHAESQDSSSGVD
FSSPSFANIKELARRFSLTFGWDQVKSRESIAMIHKEGIEFAFQGATGVDGKCLPPNLSF
LLIISEFSNKLLKPDKRLVYSYLQRYITEPLPCRGDEWQPLVLYRNSLLANEDEESPVLG
SLGEWPPMGSSKTSSFKRKLSDGSLPETSQTEAASKAPEQQCASQLPPAVGKSRKRLKSQ
EMCLQEHLPFLCPGGLRRRYCKDEVKTEDVSEEGPADDTVEDVDVVGTDQDG
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atgatagccgagcccaacgcagctagtaaccttcccagccaaaaagagaatgctgtccat
gatgagactgtgcccgagtctgctgctcagaatggcacctgtgtgagaaatggcaacctg
aaaacacctagagagaagcggaaggtccgagaacagtgtgagaacataaggaggaattct
gccggtagcagaagagtgagccagctgcagaatggcgaagtggttgaggcagttaccttg
tttgaagtggttagcatggggaagcaggccatgcagtctgtagtagttgattgggttgaa
gcttataaacaagacaggaatgtggcacttttggatctcatcaacttcttcattcagtgc
tcaggctgtcaaggcatggtaacagcagagatgtttcaaagtttgtacaagaaggatgtc
atgcgaaaaatgacagagacctttgataaggaaactgggttgcagtataagaaattcatg
gcctatccttggatcctgacagttacttggccagtgaacatggacaatgaagactacccg
ctgatcagatcaggaccctattggaagaagttcaaggccaatttctgtgaatttattgca
gtgcttgtccagcagtgccagtgcagcatcctgtatgataactacttgatggacactatc
atctcactgcttacaggtttagcagattccatggtcagagcgttcaggcacacaagcact
ttggcagcaatgaaacttctgacagcagttgtaaatgtccatctgaaccttgatatcaac
aagcacaatgctcaaagattgtatgaggtggagaagaagaggataagtggcaagaggacc
agttacagacttgatcagctagagagaaaaaggaaagagtatgagcataagcttctagag
atacagaacatgatgaatgccattttcaaagggacatttctaaaccgttaccgtgatgtt
atccctgagatcagagcaacttgcattgaagaaattggcagctggattaaaacataccca
gatgcttttttgaatgacagctacttaaaatatgttgggtggatgctgtatgataagcaa
gctgaagtgcggttgaagtgtcttctgggactgcagggaatttatagcagaaaagaactt
gcttccaggatggatctctttactaacagattcaaggatcgaattgtgtccatgcctctg
gacaaggaccatgaagtagcagttcaagccatgaaactcttgatgcttatgtcacagaac
tgtgaggatgtgttatcagctgaagactgtgaaatgttataccagtttgtttataccact
caccgtccgcttgcagtagcagctggggaattcctctataaaaggctgcttagtcatgag
ggaggtaaagaagttcagcccaaaggaggaggaaagtttggggtgagcactgaccaattg
aaaagattaatacacttcttcctggagagtgagctacacaaacatgttgtgtacctagtg
gacagcttgtgggactgggcaggcaaattcctgaaggactgggagtgcatgaccactctt
ctattaaaaaatgctgaagaagctggagaagcactgagcgatgcccaggaaagtactctc
atcgaaatcatgcttgcatcagtcagagaagcagctgaaggtcatcctccagtgggcaga
ggtgcagccaaaaaaattttgtcaataaaagagaagaaaatccaattggaagattgtacc
aaaattactgaacactttattctggtgcttcctcagctcttggcaaagtattcaacagat
gcacaaaaagtggcaaatcttctgcagattcctcagtattacgatttaaatgtttacagt
acaggacgtctagagaagcatttggatgttttgctgagagagataaaagacattgtggcc
aaacactctgacatgtctgtcctcgaggcttcctccaggacttactatatcctctgccat
gaagaaattgccatctatagccaggtggattgtgctcgaactcaaatgatagatgagttg
atcaaacaccttaaccagctactagattgcttctggcaaaaggaaggaggattttgtacg
gacacaggagaaatttcccggatgcactctactttgagaagagtggcggcttttcataat
gctcatgatctcaccaagtggaatctgtatgacaagattttaaggttcctcatgtttgaa
atggaacatggcagtttgcctgttctgattatcctaccagctctccagtgcacatatttt
tctctcctgtggcaactagctgcagtttcagaaaattctcccaagactctttttccacta
agaagggagctgagacgtttcagtcagatttgcacatgcttcctccaccataaggaaaaa
gatgtaagagaaaaggccttcatgatactctgtgactggttgctgattttgagtcacctg
gattcaaataataatgaagatacagttggaattctaggttatcttcctaacacatcactt
caggaaaaactgttttcatttatccaggaccacgttttcatggatgaagaagaggaaaaa
aaagatctgacagaagagggaaaggatgaaacttgcaaacttgatgacttgcacaaaaag
cggagtcttctggcagcatattgcaagttaatagtgtataatgtggtagagatgactgca
gccgctgagatctataagtattatgtgaagacctacagtgattttggagacataattaaa
gaaacgttaagcaagatgaggtacaataacaaaattcagagtgccaagacactgattctc
tgtctgcagcagctgtttcagacacatgcagaaagccaagacagcagtagtggtgtggac
ttctcctctccttcctttgcaaacatcaaagaacttgctcgtcgcttttcactaacattt
ggttgggaccaagtgaaatctagagagtctatagccatgatacacaaggaaggtattgaa
tttgcttttcaaggagctactggagtagatggaaaatgcttgcctcctaacttgagcttt
ctgttaatcatcagtgaattttccaacaagctgctaaagccagacaaaagactagtgtat
agttacttacagaggtacataacagagccactgccctgcagaggagatgaatggcaaccc
ttggtcttgtacagaaactctttattggcaaatgaagatgaggagagccctgtccttggc
agtttgggagagtggccccccatgggctcatctaagacatcttcttttaaaaggaaattg
tctgatgggtctttgcctgaaaccagccagactgaagcagcaagcaaagccccagaacag
cagtgtgcttcccagcttccccctgcagtagggaaaagcagaaagaggctgaagtctcaa
gagatgtgcttgcaggaacatttgccattcctttgtccaggagggctgcgtagaagatac
tgcaaagatgaggttaagacagaagatgtctctgaggagggtccagcagacgacacagtt
gaagatgttgatgttgttggtacagaccaggatggttaa
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