Cinclus cinclus (white-throated dipper): 134058040
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Entry
134058040 CDS
T10813
Symbol
MID1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1 isoform X1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
134058040 (MID1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccic04121
]
134058040 (MID1)
Enzymes [BR:
ccic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134058040 (MID1)
Ubiquitin system [BR:
ccic04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
134058040 (MID1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COS
SPRY
zf-B_box
ANCHR-like_BBOX
fn3
zf-RING_UBOX
PRY
RING_XB3-XBAT31
zf-C3HC4_4
zf-C3HC4
F36G3_coil
zf-C3HC4_2
TRIM_CC
FN3_DSCAM-DSCAML_C
zf-C3HC4_3
Pur_ac_phosph_N
zf-RING_2
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
134058040
NCBI-ProteinID:
XP_062371094
LinkDB
All DBs
Position
2
Genome browser
AA seq
695 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCATNEPVESITAFQCPTCR
YVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDNNSMSSCEKVLCQ
FCDQDPAQEAVKTCVTCEVSYCEECLKATHPNKKPFTGHRLIEPIPDSHIRGLMCLEHED
EKVNMYCVTDDQLICALCKLVGRHRDHQVAALSDRYDKLKELTPPWSPELAENSEAVAVS
LCSAMAGQQNLESNLTNLIKRNTELETLLAKLIQTCQHVEVNASRQETKLMEECDQLIEI
IQQRRQIIGTKIKEGKVVRLRKLAQQIANCKQCIERSTSLISQAEQSLKENDHARFLQTA
KNITERVSMATASSQVLIPEINLNDTFDTFALDFTREKKLLECLDYLTAPNPPTIREELC
TASYDTITVHWTSDDEFSVVSYELQYTIFTGQANVVSLCNSADSWMIVPNIKQNHYTVHG
LQSGTKYIFIVKAINQAGSRSSEPGKLKTNSQPFKLDPKSAHRKLKVSHDNLTVERDETS
SKKSHTPERFTSQGSYGVAGNVFIDSGRHYWEVVISGSTWYAIGISYKSAPKHEWIGKNS
ASWVLCRCNNTWVVRHNSKEIPIEPAPHLRRVGILLDYDNGSLAFYDALNSLHLYTFDIT
FGQPVCPTFTVWNKCLTIITGLPIPDHLDSSEQLA
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggaaacactggagtcagaactgacctgccctatctgtctggagctgtttgaagacccg
ctgctgctgccttgcgctcacagcctctgcttcaactgcgcgcaccgcatcctggtctcc
cactgcgccaccaacgagccagtggagtctatcaccgccttccagtgcccgacctgccgc
tatgtcatcaccctcagccagcgcggtctagacgggctcaagcgcaacgtcaccctgcag
aacatcatcgacaggtttcagaaagcctcggtcagtgggcccaattcccccagcgagacc
cgccgggagcgggcgttcgataacaacagcatgtcgtcctgcgagaaggtgctctgccag
ttctgtgaccaggaccctgcccaggaggcggtgaaaacctgcgttacctgcgaggtgtcc
tactgcgaggaatgcctgaaagccactcaccccaataagaagccgttcaccggccaccgt
ctcatcgagcctatcccggactctcacatcaggggattaatgtgcttggagcatgaggac
gagaaagttaacatgtactgtgtgactgatgaccagttaatctgtgccttgtgtaaactg
gtcgggcgacaccgtgaccatcaggtggcagctttaagtgaccgctatgacaagctaaag
gaactaaccccaccctggagtccagaacttgctgagaattcagaagctgtggcagtatca
ctctgtagtgccatggcaggccagcaaaatttggagagtaacctcaccaaccttattaag
aggaacactgaactggaaactcttctggcaaaactcattcagacctgccaacatgtagaa
gtaaatgcatcccgccaagaaaccaagctgatggaagaatgtgaccaactcattgaaata
atccagcaaagacggcaaataattggaaccaaaatcaaagaaggaaaggtggtgaggttg
agaaaactggctcagcagattgcaaactgcaaacagtgcattgagcgctcaacatccctc
atctctcaggctgagcaatcactgaaggagaatgatcacgctcgcttcctgcaaacagct
aaaaatatcactgaaagggtttccatggcaactgcatcctcacaggtcctaattcctgaa
attaacctcaatgatacttttgatactttcgcacttgattttaccagggagaagaaattg
ttggaatgccttgattaccttacagctcccaacccacccacgattcgagaagagctctgt
acagcctcttatgacaccattactgtgcactggacatcagatgatgagttcagtgtggtc
tcttacgagctgcagtataccatcttcactggacaagccaatgttgttagtttatgcaac
tcagccgacagctggatgattgttcctaatatcaaacaaaaccactacacagtgcatggg
ttacagagtggcacgaagtacatcttcatcgtcaaggccattaatcaggctggcagccgc
agcagcgagcctggcaagctcaagacaaacagtcagccatttaaactggaccccaaatct
gctcatagaaaattgaaagtgtctcatgataacttgacagtggaacgggatgaaacatca
tctaagaagagtcacacaccagagcgattcacgagccaagggagctatggagtagctggc
aacgtgttcatcgacagcgggcggcattactgggaagtggttatcagtgggagtacatgg
tatgctattggtatttcctacaagtcagcaccaaagcacgagtggattggaaagaattct
gcctcctgggtgctttgccgctgcaacaacacatgggtggtgcggcacaacagcaaagaa
atccccatcgagcccgcgcctcacctgcggcgggtcgggattttgctggactatgacaat
ggttcccttgccttttatgatgctttgaactccctacacctttacacttttgacattacg
tttggccagccagtgtgccccacgttcacggtgtggaataaatgtttgaccattataact
ggcttgcctatccctgaccacctagactcctccgagcaactcgcgtga
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