Cinclus cinclus (white-throated dipper): 134058078
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Entry
134058078 CDS
T10813
Symbol
PTCHD1
Name
(RefSeq) patched domain-containing protein 1 isoform X1
KO
K24682
patched domain-containing protein
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
Domain-containing proteins not elsewhere classified [BR:
ccic04990
]
Other domain-containing proteins
Patched domain-containing proteins
134058078 (PTCHD1)
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GFIT
Other DBs
NCBI-GeneID:
134058078
NCBI-ProteinID:
XP_062371139
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Position
2:104263388..104296427
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AA seq
888 aa
AA seq
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MLRQVLHRGLGTSFSRLGHFVASHPVFFASAPVLISILLGASFSRYQVEESVEHLLAPTH
SLAKIERNLVDSLFPVNRSKHRLYSDLQTPGRYGRVIITSFRKANMLDQHHTDLILKLHS
AVTRIQVQRPGFNYTFAHICILNNDKTCIVDDIVHVLEELKAARSSNRTNFAITYPITHL
KDGREVYNGHQLGGVTVHSKDRVKSAEAIQLTYYLQAINSLNDMVAEKWESIFCDTVELF
QKSNRKVKMYPFTSSSLKEDFQKTSRVSERYLITSLVLVVTLAILCCSMQDCVRSKPWLG
LLGLLTVTLATLTAAGIINLTGGKYNSTFLGIPFVMLGHGLYGTFEMLSSWRKTREDQHV
KERTAAVFADSMLSFSLTTAMYLVTFGIGASPFTNIEAARIFCCNSCIAIFFNYLYVLSF
YGSSLVFTGYIENNYQHSIFCRKVPKPEVLQEKPAWYRFLLTARFSEDTDDSEETNTYES
HLLVWFLKRYYCDWITNTYVKPFVVLFYLVYISFALMGYLQVSEGSDLSNIVATATRTIE
YTAAQQKYFSNYSPVIGFYIYESIEYWNTSVQEDVLEYTKGFVRISWFESYLNYLRKLNI
STGLPKKNFTDMLRNSFLKTPQFAHFSEDIIFSKKYNNEVDVVASRMFLVAKTMETKREE
LYDLLETLRKLSLTSKVKFIVFNPSFVYMDRYASSVGAPLQNSCISALFLLFFSAFLVAD
SLINVWLTLTVASVEFGVIGFMTLWKVELDCISVLCLIYGINYTIDNCAPLLSTFVLGKE
FTRTKWVKNALEVHGVAILQSYLCYIVGLIPLAAVPSNLTRTLFRCLFLIALVTFFHCFA
ILPVILTFLPPSKKKRKEKKNPENREEIECVEMVDMDSTRVVDQITTV
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgttgcggcaggtcttgcacagggggctggggacgtccttctcccggctcggccacttc
gtcgccagccacccggtgttcttcgcctcggcgcccgtgctcatctccatcctgctgggc
gccagcttcagccgctaccaggtggaggagagcgtggagcacctcctggcccccacgcac
agcttggccaagatcgagaggaacctggtggacagcctcttcccggtgaaccgctccaag
caccggctctactccgacctgcagacgcctgggaggtacggccgggtgatcatcacctcc
ttccgcaaggccaacatgctggaccagcaccacaccgatctcatcctcaagttgcactct
gcagtgaccaggatccaagttcaaagacctggtttcaattacacgtttgcccatatatgt
atcctgaacaatgacaagacatgcatagtggacgacatagtgcatgtactggaggaatta
aaggctgctcgttcttctaatcgaactaattttgcaatcacttatccgattactcactta
aaggatggcagggaagtgtataatgggcatcagctcggtggggttactgtgcacagcaag
gaccgggtgaagtctgcagaagccattcagctcacctactacttgcaggcaatcaactcc
ttgaatgacatggtggcagagaagtgggaatccattttttgtgacactgttgaacttttc
cagaaatccaacaggaaagtcaaaatgtatcctttcacttcctcttcgctgaaggaggat
ttccagaagacgagcagggtgtcagaacgctacctgatcacaagcttggtccttgtggtc
accttggccattctctgctgctccatgcaggattgtgtccgcagcaaaccctggcttggc
ctgctgggattgctgacagtgactcttgccaccctgactgctgctgggatcatcaatctc
actggtgggaagtacaattccaccttcctgggaattcccttcgtcatgttaggtcatggg
ttgtatgggacttttgaaatgttgtcctcctggagaaaaactagagaagatcaacacgtt
aaagagaggactgcagctgtatttgcagactccatgctctcgttttctctcaccactgcc
atgtacctggtcacttttggaataggtgccagtcccttcactaacattgaagcagccagg
attttctgctgcaattcctgtattgcaattttcttcaactacctctatgtactctccttt
tatggttccagcctggtgtttactggctacatagaaaacaactaccagcatagtatcttc
tgcagaaaggtaccaaagccagaggtattgcaagagaagcctgcatggtataggtttctt
ctgacagccagattcagtgaggacacggatgattcagaggaaacgaacacttacgagagt
catcttttggtgtggttcctgaaacgctattattgtgactggataacaaacacttacgtc
aagccttttgtagttctcttttaccttgtttatatttcctttgccttaatgggctacctg
caggtcagtgaggggtcagacctgagtaacatcgtagcgactgcgactcggaccatcgag
tacacagctgcccagcagaagtatttcagtaactacagcccggtcattgggttctacatc
tacgagtccatcgagtactggaacaccagtgtccaggaggacgtattggagtataccaag
ggctttgtgaggatatcttggttcgaaagctacttaaattaccttaggaaactcaacata
tctactggattgccgaagaagaatttcactgatatgttgaggaactcctttctgaagacc
cctcagtttgcccatttttcagaggatatcatcttttccaagaaatacaacaatgaagtt
gatgttgtggcctccaggatgttcttggtggccaagacaatggaaaccaagagggaagaa
ctttatgacctcctggagactctaaggaagctctctctcacctccaaggtgaagttcata
gttttcaatccgtcatttgtgtacatggatcgttatgcctcttcagtgggagccccctta
caaaactcctgcattagtgctttatttctgctcttcttctctgcattcctggtggcagac
tctctgatcaatgtctggctcactctaactgttgcctcggttgaatttggagttataggt
tttatgaccttgtggaaagtggaactagattgtatttctgtgttgtgcttaatttacgga
attaattatacaattgacaactgtgctccactgttgtcaacctttgtcctgggcaaagag
ttcacaagaactaaatgggtgaaaaatgccctggaagtgcatggggtagctattttgcag
agctacctctgctatattgttggtctgattcctcttgcagctgtgccttcaaatctgacc
cgtacactgttcaggtgcttgtttttaatagcattagtcaccttctttcactgctttgcc
attttacctgtgatactgactttcctgccgccctccaagaagaagaggaaagagaagaag
aaccctgaaaaccgtgaggaaatagagtgtgttgaaatggtggatatggatagcacccga
gtggttgaccaaattacaacagtctaa
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