Cinclus cinclus (white-throated dipper): 134058099
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Entry
134058099 CDS
T10813
Symbol
NYX
Name
(RefSeq) nyctalopin isoform X1
KO
K08129
nyctalopin
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ccic00535
]
134058099 (NYX)
Proteoglycans [BR:
ccic00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
134058099 (NYX)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_14
LRR_9
LRRNT
DUF5886
Herpes_glycoH_C
Motif
Other DBs
NCBI-GeneID:
134058099
NCBI-ProteinID:
XP_062371165
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Position
2:110481683..110486613
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AA seq
473 aa
AA seq
DB search
MFAIILNVILWVPQVQGVWACVRSCPPSCVCTPERSCSVLCDRAGLGQIPSQFPCEASSI
NLDKNSIKFLSERAFGTLPSLRSLSLNHNNISFITPGAFKGLPSLTELKMAHNEYIRYLH
TRTFTALRRLVRLDLADCNLFNIPDRIFIELPALQELFCFQNNFRRIPGAIRGMENLTHV
YLERNRIEAVAYNSLQGLTKLKYLNLQDNKINVIHERAFQGCQRMEYLYLNDNLISELPE
NSFDGLRRLKMLNLGGNFLRNISNTWFRDLGELEFLYLDRNRISYIEEGAFENLTSLVAL
HLNSNNLTTLPFSVFEPVYFLGRLYLFRNPWECDCRLEWLKEWMENYRLVRDIPCASPSS
VAGIDLTDVLFERSPEGYCLDPVELNVTSEGPTQSQEPWSTTESKFNSLISKLLLQMGLP
EEVANATEVYSNSTRPDGQTEGVSSGMGEGRTEADSSSLYFPALFTVAVLLCK
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgtttgccatcattctaaatgtgatcctttgggtcccacaggtgcagggggtgtgggcc
tgcgtacgctcctgccctcccagctgcgtgtgcaccccggagaggagctgctctgtgctc
tgtgaccgggccgggctggggcagatccccagccagttcccctgcgaggcctcttccatc
aacctggataaaaacagcatcaagttcctgtctgagagggccttcgggacgctgccttcc
ctcaggtccctgtcgctcaaccacaacaacatctccttcatcacgccgggggcgttcaag
gggctgcccagcctgacggagctgaagatggcccacaacgagtacattcgctatctccac
acgcgcaccttcaccgcgctccggcgcctcgtcaggctggacctggccgactgcaacctc
ttcaacatcccagacaggatcttcatcgagctgcctgctctgcaggagctgttctgcttc
cagaacaacttccgaaggatcccaggcgccatcaggggcatggagaacttgacccatgtg
tacctggagagaaacaggatcgaagcggtggcttataactccctgcagggcctgaccaag
ctgaaatacctgaatctgcaggacaacaagataaatgtcatccacgagcgagcttttcag
ggctgtcagaggatggagtacctgtacctcaatgacaacttgatcagcgagcttccagaa
aactcctttgatggcctgaggcgcctgaagatgctcaacctgggggggaattttctcagg
aacatttccaacacctggttccgggacttgggggagctggagttcctctacctggaccgc
aaccggatcagctacatcgaggaaggagcttttgagaacctcaccagcctggtggctctg
cacttgaacagcaacaacctgacgacgctgcccttctccgtgttcgagcccgtgtacttc
ctggggcgcctgtacctcttccgcaacccctgggagtgcgactgccgcctcgagtggctc
aaggagtggatggagaactacagactcgtcagggatattccgtgtgcctccccctcctcc
gtggctgggatcgacctgacggacgtgctctttgagagatctcccgaaggttactgtctc
gacccggtggagctgaatgtcacgtccgaggggccgacccagagccaggagccttggtct
accacagagagcaagttcaacagccttatctccaaactcttgctccagatgggccttcct
gaggaggtggcaaacgccactgaagtgtacagtaacagcacgcggccggacggacagacc
gaaggggtttcttccggcatgggggaaggcagaaccgaggctgactcctcttccttgtac
ttcccagcactttttacagtggctgttctgctgtgcaaatag
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