Cinclus cinclus (white-throated dipper): 134058138
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Entry
134058138 CDS
T10813
Symbol
CHAF1B
Name
(RefSeq) chromatin assembly factor 1 subunit B
KO
K10751
chromatin assembly factor 1 subunit B
Organism
ccic Cinclus cinclus (white-throated dipper)
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccic03036
]
134058138 (CHAF1B)
Chromosome and associated proteins [BR:
ccic03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
134058138 (CHAF1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
WD40
CAF-1_p60_C
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
ANAPC4_WD40
EIF3I
WDR55
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
B-prop_COPA_B_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_SPT8
Beta-prop_RIG_2nd
NBCH_WD40
eIF2A
Beta-prop_EML
Beta-prop_ELP1_1st
WDR90_beta-prop_4th
Beta-prop_IP5PC_F
Beta-prop_Nup120_160
Beta-prop_SCAP
Ge1_WD40
Beta-prop_DCAF12
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
134058138
NCBI-ProteinID:
XP_062371221
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Position
2:complement(115721892..115732459)
Genome browser
AA seq
591 aa
AA seq
DB search
MFVLFVPGNMKVITCEIVWHNKEPVYSLDFQHGADGRINRLASAGVDTAVRIWKVEKGPD
GKAIVEFLSNLARHTKAVNVVRFSPSGDILASGGDDAVILLWKLNDSKELEPLVFQDDDE
AQLNKENWAVIKTLRGHLEDVYDICWTSDGNYMASASVDNTAIMWDVNKGQKVSIFNEHK
SYVQGVTWDPLGQYIATLSCDRVLRVYSTQTKRVAFNVTKMPSGSGAEGEARSFRMFHDD
SMKSFFRRLSFTPDGSYLLTPAGCVESGENVTNTTYVFCRNNLKRPVGHLPCPGKGTLAV
RCCPVYFELKGASAKDEISPKSPPALFNLPYRLVFAVASEDSVLFYDTEQSFPFGYVSNI
HYHTLSDISWSSDGSFLAISSTDGYCSFVTFEEDELGVPLKEKPQIHVRTPGAAADKKAK
KSQSHKVISPGSRLAEGTPPSKDPPLQARTPNIAGKELPSTPVGIKTTPVSSPSSPAGIQ
TIPVPPSEERRSSQASTQSSRAPQPRRVTLTTLQSCFKTPRRINLISLKPDTPASAYPDP
APIPPSSEQEHERPLPSDESLQAPPAPKRARIEELSLPAPAGDQTSCEPNK
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttctgtttgttccaggaaacatgaaggtcatcacctgtgaaatagtgtggcac
aataaggagccggtttacagcttggacttccagcatggagcggatgggaggatcaatcgg
ctggcctcggctggggtggacacggccgtgaggatctggaaagtggagaaaggcccggat
ggaaaagccattgtggaattcctgtccaacctggcacgccacaccaaggccgtgaacgtc
gtgcgcttctctcccagcggggacatcctggcctcgggaggggacgatgctgtcattttg
ctgtggaagctgaatgacagcaaagagttggagcccttggtttttcaggatgatgatgaa
gctcagctcaacaaggagaactgggcagtcattaaaactttaagaggccacttggaagat
gtgtatgatatttgttggacctcagatggaaattacatggcatctgcttctgtggataac
acagcaatcatgtgggatgtcaataaaggacagaaagtttcaatatttaatgagcacaag
agttatgtccaaggagtaacctgggatcctctaggccagtatattgcaaccctgagttgt
gacagggtcctgcgagtttacagcacccagaccaagcgagtggccttcaatgtcaccaag
atgccatcgggctcaggagctgagggagaggcgaggagctttcggatgtttcacgacgac
agcatgaagtcgtttttccgcaggctcagcttcactcctgatggctcctacctgctcact
ccagctggctgtgtggaatcaggagagaacgttacaaacaccacctatgttttctgcaga
aacaatcttaaaaggcccgtgggtcacctgccctgtcctggcaagggaactctggctgtt
cgctgctgtcctgtgtacttcgagctgaaaggagcctctgctaaagatgaaatcagtccc
aaatccccccctgccctgtttaacctcccctatcgattggtgtttgctgttgcttctgaa
gattctgtgcttttctatgacactgagcagtccttcccctttggttatgtctccaacatc
cattaccacaccctgagtgacatttcatggtccagtgatggatccttcctggccatttcc
tccacggacggttactgctccttcgtcaccttcgaggaggatgagctgggagtgcccctg
aaggaaaagccccagatccatgtcaggactcctggtgcagcagcagacaagaaagccaag
aagagccaatcccacaaagtgatttccccaggctccaggctggcagaggggacccctccc
agcaaggatcccccactccaagcccgaacccccaacattgctgggaaggagctgccttcc
acccctgttggcatcaaaaccactccagtgtcatccccttcctcccctgctggcatccag
accattccagtgccaccctcagaggagaggagaagcagccaggccagcacccagagcagc
agagccccccagcccaggagggtcaccctcaccactctgcagtcctgtttcaaaacaccc
aggagaataaacttgatttccttgaagccagacaccccagcctctgcatatccagaccca
gctcccatccctccttcctcagaacaggaacatgagaggccactgccatctgatgagagc
ctccaagctcccccagcaccaaaacgtgccaggattgaggaattgtcccttcctgcacct
gctggagaccaaaccagctgtgaacccaacaaataa
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