KEGG   Cinclus cinclus (white-throated dipper): 134058175
Entry
134058175         CDS       T10813                                 
Symbol
SCAF4
Name
(RefSeq) SR-related and CTD-associated factor 4 isoform X1
  KO
K13167  SR-related and CTD-associated factor 4
Organism
ccic  Cinclus cinclus (white-throated dipper)
Brite
Transcription machinery [BR:ccic03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     134058175 (SCAF4)
Spliceosome [BR:ccic03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   SR proteins
    134058175 (SCAF4)
SSDB
Other DBs
NCBI-GeneID: 134058175
NCBI-ProteinID: XP_062371262
LinkDB
Position
2:complement(1097225..1127208)
AA seq 1087 aa
MEAVNAFNQELFSLMEMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV
PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN
GVFKIEIIQPLLDMAAGTSAAAPMAENATNNEGSPPPPAKVPSEPPQVTANSVPSVPQLP
SSDAFAAVAQLFQTTQGQQLQQILQTFQQPQKPQSPVIDNTVMAQVQAITAQLKTTAAQP
PEQKAAFTAPEQKTSFDKKLLDRFDYDDEPEAVEDSKKEDSAPSPSVSQPPLTSLSFSAQ
AGWCSMPGGFPGEGMQQPVFPQLPNMDPFQQRMMGMQQDPMRHQVPLPPNGQMPGFGLLP
TPQFPPMAQPVMPPAAPVQPTFQSPFPVQAEAHLQKPHQQDMEVEQPPVQEGKRHVSDSR
KSRSRSASRSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRHSPKSRSQERRERERDRERRS
KGLPQIKAETVSVCSTTLWVGQLDKRTTQQDVGSLLEEFGPIESINMIPPRGCAYIVMVH
RQDANRALQKLSRGNFKVNQKSIKIAWALNKGIKPDYKQYWDVELGVTYIPWDKVKPEDL
ESFCEGGMLDNETLSPEWKGIPKKSENEVAQNGGAEAAHNEPVSPIPKALPVPIPVPMPA
PITVPPPQVPPHPSGPPVVGALQPPAFTAPLGIPPPGFAPGVPPPPPPPFLRPGFNPLHL
PPGFLPPGPPPPITPPVSVPHTPAVNIPNSTATGGSEDTTKESSVGNPIPTVVSGGRGTA
ESTDTSKIYGTVPPPVAPTNVPAPVTQAVPLLGTQGVAPPPPAPVVGLQTPSTGLLGARP
GLIPLQRPPGMPPPPPLPRFPMMPPRHMPPHMMHRGPPPGPGGFGMPPPHGMKTPFPPPG
HFVRPGGGGQGGGPEENRDGRQFRNDRQFTPGREQERFGRRSFGSRAENDRERYGGRDER
EHERPGGRDRRDWGRRSPERDRHRDSEDRNRRSGGHRDRERDSRDRESRRDKEETRGKEK
PEATDRAEGDKNHEPHGGGGGKTEGAELVCELAAGEAEPVGAKAAPESVPEATSSLEQAD
KDTGSAG
NT seq 3264 nt   +upstreamnt  +downstreamnt
atggaggccgtgaacgccttcaaccaagagctcttctcactgatggagatgaagcctcct
atttcccgagctaagatgattctcatcacaaaagctgccattaaagctattaagctctac
aagcatgttgtccagattgtggagaagtttatcaaaaagtgcaagccggagtacaaagtg
ccgggcttgtacgtcatcgactccatcgttcggcagtcccggcaccagttcggaacggac
aaggacgttttcgggcccaggttctccaagaacattactgccacattccagtatctgtat
ctctgcccgtctgaagacaagagtaaaatagttcgtgtcctgaacctctggcagaaaaat
ggagtatttaaaattgaaatcattcagcctctcttggatatggcagcaggaaccagtgcc
gctgcacccatggcggagaatgctactaacaatgaaggttcgccgccccctccggccaag
gttccctcggagcccccgcaagtgacggcgaactccgtgcccagcgtgccgcagctgccc
agctccgatgccttcgcagccgtggcccagctgttccagacaacacagggacagcagctc
cagcaaatcctgcagaccttccagcagcctcagaagccccagtcaccggtcatagacaac
actgtgatggctcaggttcaagctattactgctcagctgaaaaccacagcagcacagccc
ccagagcagaaagctgctttcacagcacctgagcagaaaacatcatttgacaaaaagctg
ctagatcggtttgactatgatgatgaaccagaagcagtggaagattcaaagaaagaagat
tcagctccttccccttcggtgtctcagccgcctttgacctctctctcattcagtgcacag
gctggatggtgctcaatgccgggtgggtttccaggagaaggcatgcagcagccagtattt
cctcagctcccaaatatggatccttttcagcagcggatgatgggaatgcagcaggatccc
atgaggcaccaggtgccgcttcctccgaacgggcaaatgccaggctttggtctcctgcct
accccccagttcccacccatggctcagccagtgatgcctccagcggctccagtgcagcca
accttccagtctcccttcccagtccaggctgaagcacacctgcagaaaccacaccagcag
gatatggaagtggaacagccgcccgttcaggaggggaaacggcatgtttctgacagtagg
aaatcaagatctcgatccgcatcaaggtcccccaagaggagacgctcccgctcgggctcc
cgctcccggcgctcgcggcaccgccgatcccgctcgcgctcccgggaccggcgccggcac
tcgcccaagtcccgctcccaggagcggcgcgagcgcgagcgggacagggagcgccgctcc
aagggcctgccccagatcaaggcagagaccgtcagtgtttgcagtaccacgctctgggta
ggacagctcgacaaaaggacgactcagcaggatgtgggaagtctcttggaggagtttggc
cccattgagtcgatcaatatgataccgcccagaggatgtgcctacattgtcatggtgcac
agacaagatgccaacagagccctccagaaactgagccgaggcaacttcaaagtcaaccag
aaatccatcaagattgcctgggccctgaataaaggaataaagccagactacaagcagtat
tgggatgtagaattgggtgtgacttacataccatgggacaaagtcaaacctgaagatctt
gaaagtttctgtgaaggaggaatgctggacaacgagacccttagtccagagtggaaggga
attcccaagaagtctgagaacgaagtggctcagaacggaggtgcagaagctgcgcacaat
gaaccagtgtcacctattcccaaagctttacctgtcccaattcccgttcccatgcctgca
ccgataacagtacctcctccacaggtccccccccatccatcagggcctcccgtggttggt
gcactccagccccctgctttcacagcacctttagggatcccccctcctggatttgccccc
ggggtgccgccaccaccaccgcctccattcctccggcccggcttcaaccctctgcatttg
cctccaggattccttcctcctgggccaccgcctcccataactcctccggtctctgtcccg
cacactccggcggtgaacatcccaaactctacagcaactggtgggagcgaggacactacc
aaggagtcgtctgtaggaaatcccatcccaacagtagtttctggaggcagagggactgct
gaaagtactgacacttccaaaatctacggcactgttccacctcctgtagcccctaccaat
gtccctgctcccgtcacccaggctgttccactccttggcacccagggcgtggccccgccg
cctcccgcgcccgtggtggggctgcagactccgtccacggggctgctgggcgcccggccc
gggctgatcccgctgcagcgcccgccgggaatgccgccgccgccgccgctgccgcgcttc
cccatgatgccgccgcgccacatgccgccgcacatgatgcacagggggcccccgccgggc
cccggcggcttcgggatgcctcccccgcacggaatgaaaaccccctttcctccgcccggc
cacttcgtgcggcccggcggcggcggccagggcggcgggcccgaggagaacagggacggg
cggcagttcaggaacgacaggcagttcacgcccggcagggagcaggagcggttcgggagg
agatccttcgggagccgggcggagaacgaccgggagcgctacggcggccgcgacgagcgg
gagcacgagcggcccggcgggcgcgacaggcgagactggggacggcggagccccgagcgc
gaccggcaccgggactcggaggacaggaacaggcgctccggcggccaccgagacagggag
agggattccagggatcgggagtctcgcagagacaaagaagaaacgcgcggcaaggagaag
ccggaggcgacagacagggcggagggcgacaaaaaccacgagccccacggcggcggcggc
ggcaaaacggagggcgcggaactcgtttgcgaactggccgcgggagaagcggagcccgtg
ggtgcgaaagccgcgccggagtcggtgccggaggctacctcatccctggaacaggcggac
aaggacacgggctcggcgggctag

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