Cinclus cinclus (white-throated dipper): 134058197
Help
Entry
134058197 CDS
T10813
Symbol
POU2F1
Name
(RefSeq) POU domain, class 2, transcription factor 1 isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
134058197 (POU2F1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccic03000
]
134058197 (POU2F1)
03021 Transcription machinery [BR:
ccic03021
]
134058197 (POU2F1)
Transcription factors [BR:
ccic03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
134058197 (POU2F1)
Transcription machinery [BR:
ccic03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
134058197 (POU2F1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
134058197
NCBI-ProteinID:
XP_062371298
LinkDB
All DBs
Position
2:complement(4741212..4790988)
Genome browser
AA seq
754 aa
AA seq
DB search
MLDCSDYVLDSRMNNPSETSKPSMESGDGNTGTQTNGLDFQKQPVPVGGAISTAQAQAFL
GHLHQVQLAGTSLQAAAQSLSVQSKSNEESGDSQQPSQPSQQPSVQAAIPQTQLMLAGGQ
ITGLTLTPAQQQLLLQQAQAQLLAAAVQHSASQQHSAAGATISASAATPMTQIPLSQPIQ
IAQDLQHLQQLQQQNLNLQQFVLVHPTTNLQPAQFIISQTPQGQQGLLQAQNLLTQLPQQ
SQANLLQSQPSITLASQPATPTRTIAATPIQPLPQSQSTPKRIDTPSLEEPSDLEELEQF
AKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLN
DAENLSSDSTLSSPSALNSPGQGIEGLNRRRKKRTSIETNIRVALEKSFLENQKPTSDEI
AMIADQLNMEKEVIRVWFCNRRQKEKRINPPSSGGTSSSPIKAIFPCPTSLVATTPSLVT
SSAATTLTVNPVLPLASPAVTSLSVTGTTETTSNNTATVISTAPPASSAVTSPSLSPSPS
ASASTSEASSASETSTTQTTSTPLSSPLGTSQVMVTASGLQTAAAAALQGAAQLPANASL
AAMAAAAGLNPGLMASSQFAAGGALLSLNPGTLGGALSPALMSNSTLATIQALASGGSLP
ITSLDATGNLVFANAGGTPNIVTAPLFLNPQNLSLLTSNPVSLVSAAAASAGASGPVASL
HATSTSAESIQNSLLTVASASGATSTTTTASKAQ
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgctggactgcagcgactacgttctagactcaagaatgaacaatccgtcagaaaccagt
aaaccatcgatggagagtggggacgggaacacaggcacgcaaacaaatggcctggacttt
caaaagcagcctgtgcctgtcggaggagcaatctctacagcccaggcccaggccttcctt
gggcaccttcatcaggtccagctcgctggaacaagtttacaggctgctgctcagtcctta
agtgtacagtctaaatctaatgaagaatctggggactctcagcagccaagccagccttcc
cagcagccttcagtgcaggcggccataccccagacccagctcatgctggccggaggacag
atcactgggctcacgttgacgccagcccagcaacagttattgctccaacaggcgcaggcc
cagttgctggcggctgcagtgcagcactcagccagtcagcagcacagcgctgctggtgcc
accatctcggcctctgctgcgacgccgatgacgcagatccctctatctcagccaatacag
attgcacaggatttgcagcacttgcagcagcttcagcagcagaatctcaacctgcaacag
tttgtgttggtgcatccaacaaccaacttgcagccagcacagttcatcatctcacaaacg
ccgcaggggcagcagggtctcctgcaagcgcagaatctcttaacgcaactacctcagcaa
agccaagccaacctcctgcagtctcagccaagcatcacccttgcctcgcagccagcaacc
ccaacacgcacaatagcagcgacccccattcagccacttccacagagccagtcaacacca
aagcgaattgacactcccagcttggaggagcccagtgaccttgaggagcttgagcagttt
gccaagactttcaaacaaagacggatcaaacttggattcactcagggtgatgttgggctc
gctatgggcaaactctatggaaatgacttcagccaaactaccatctctcgctttgaagcc
ttgaacctcagctttaagaacatgtgcaagttaaagccacttctggaaaagtggctcaat
gatgcagaaaacctctcatctgattcaactctctccagcccaagtgccctgaattctccg
gggcaagggattgaaggcttgaaccgtaggaggaagaaacgcaccagcatagagaccaac
atacgtgtggccttagagaagagtttcctggagaaccaaaagcctacctcggatgagatc
gccatgatagctgaccagctaaacatggagaaggaggtgatccgcgtttggttctgtaac
cggcgccagaaggagaaaaggatcaacccacccagcagtggtggaaccagcagctcgccc
atcaaagcaattttcccctgtccaacctcactggtggcaaccacgccaagccttgtgact
agcagtgcagctacaaccctgactgtcaaccccgtgctccctctggccagtcctgctgtc
accagtctgtcagtcacaggcactacagaaaccacctccaacaacacggcaacagtgatt
tcaacagcacctccggcttcttcagcagtgacatcaccctccctgagtccttccccttct
gcctcagcctccacttcagaggcatccagtgccagtgagaccagcacaacacagacaacc
tccacccccttgtcctcccctctcgggaccagccaggtgatggtaacggcgtcagggttg
caaacagcggcagcggccgcgttacaaggagctgcacagttgcctgcaaatgcaagtctt
gctgccatggctgctgcagcaggactaaacccaggcttgatggcatcctcgcagtttgca
gctggaggtgccttactcagtctcaatccagggacattaggtggtgctctcagcccggcc
ctgatgagcaacagtacactggcaactattcaagctcttgcatctggtggctctcttcca
ataacatcactggatgcaactggaaacttggtgtttgccaatgctggaggtacccctaac
atcgtcactgcccctctgttcctgaaccctcagaacctttctctgctcaccagcaaccca
gttagcttggtctctgcagctgcagcctccgcaggggcctctggaccagtcgccagcctt
cacgccacctccacctcagccgagtccatccagaactctctcctcaccgtggcctctgcc
agcggggccacgtccaccaccactactgcctccaaggcacagtga
DBGET
integrated database retrieval system
