Cinclus cinclus (white-throated dipper): 134058274
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Entry
134058274 CDS
T10813
Symbol
GTF2E1
Name
(RefSeq) general transcription factor IIE subunit 1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
ccic Cinclus cinclus (white-throated dipper)
Pathway
ccic03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ccic00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
134058274 (GTF2E1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccic03021
]
134058274 (GTF2E1)
Transcription machinery [BR:
ccic03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
134058274 (GTF2E1)
Prokaryotic type
Archaeal type
TFE
134058274 (GTF2E1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
Zn_Ribbon_TF
PyrI_C
Motif
Other DBs
NCBI-GeneID:
134058274
NCBI-ProteinID:
XP_062371496
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Position
2:28217578..28266023
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AA seq
442 aa
AA seq
DB search
MTDPDVLTEVPAALKRLAKYVVRGFYGIEHALALDILIRNPCVKEEDMLELLKFDRKQLR
AVLNTLKGDKFIKCRMRVETAPDGKTTRHNYYFINYRLLVNVVKYKLDHMRRRIETDERD
STNRASFKCPICFSTFTDLEANQLFDPRTGTFRCTFCETEVEEDESAMPKKDARTLVARF
NEQIEPIYALLRETEDVNLAYEILEPEPTEIPALKQSKERAAGAGSGAAAGLAGGHHREA
WTAKGPSYEDLYTQNVVISMEDQEDLSRSASEGKPARERPIWLRESTVQGAYDPDEIKDG
GRDLDAFQEREESRATLDDNEEVMRALLIHEKKTPSASTVTVSGAAPLSGGNVSDSESET
SESEEESPPRPAATATTTYGLEEEEEDEEFEVVAEDPTVTVAGRPHSYSQVSQRPELVAQ
MTPEEKEVYIAMGQRMFEDMFD
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgactgacccagatgtcctcactgaggtcccagcagctcttaaacgccttgccaaatat
gtggtgcgtggcttttatggcattgagcatgctttggctctggacatcctcatcaggaac
ccctgcgtgaaggaggaggacatgctggagcttctgaagttcgacaggaagcagctgagg
gctgtcctcaacaccttgaagggtgacaagttcatcaaatgcaggatgagggttgagacg
gcccctgacggcaaaaccacgcgccacaactattacttcatcaactaccgcctgcttgtc
aatgtggtcaagtacaagctggaccacatgcgccgcaggatcgagaccgatgagagagac
tccaccaaccgagcctcttttaaatgccccatctgcttcagcactttcacagatttggag
gccaaccagctgtttgaccccaggacaggaactttccgctgtacgttctgtgagactgaa
gtggaagaagatgagtcggcaatgcccaaaaaggatgcgaggacactcgttgcgcggttt
aacgagcagattgagcccatctacgcactgcttcgtgagacggaagatgttaacttagcc
tatgaaatcctggagccagagcccacagagattcctgccctgaagcagagcaaggagcgt
gcagctggtgctggttcaggggcagcagctggccttgcaggtggacaccatcgggaagca
tggactgcaaaaggaccatcatatgaggacttgtatacccagaatgtcgtcatcagcatg
gaggaccaggaggatctgagccggtctgcaagtgaaggaaagccagctagagagagaccc
atttggctgcgtgagagcacagtgcagggggcttatgatcctgatgaaataaaagatggg
ggccgggatctggatgcgttccaggagcgtgaggagagccgggcaaccctggatgacaat
gaggaggtgatgcgtgccctgctcatccacgagaagaagacaccttctgcttccactgtc
actgtcagcggtgccgctcctctctctggtggcaatgtgagtgactcggagagcgagaca
agcgagtcggaggaggagtctcctccccgccctgctgccacagccaccacaacatatggg
ctggaggaggaagaggaggatgaagagtttgaggtggtggcagaagaccccactgtcaca
gtggctggtcgtccacattcttacagccaagtgagccagcgccccgagctggtggcccag
atgacaccagaggaaaaagaggtttacatagctatggggcagcgcatgtttgaggacatg
tttgattaa
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