Cephus cinctus (wheat stem sawfly): 107263103
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Entry
107263103 CDS
T07523
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4 isoform X1
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
ccin
Cephus cinctus (wheat stem sawfly)
Pathway
ccin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107263103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccin03041
]
107263103
Spliceosome [BR:
ccin03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
107263103
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
PRP4
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_DCAF4
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_SPT8
Ge1_WD40
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_HPS5
WD_LRWD1
Beta-prop_WDR19_1st
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
107263103
NCBI-ProteinID:
XP_015585440
UniProt:
A0AAJ7BHG1
LinkDB
All DBs
Position
Unknown
AA seq
557 aa
AA seq
DB search
MSDDEDLVYVKKQKTVHYGSLEEAERIRLATAAAESSEEDKDSANANDMPTISAMAGNVH
ISNEYMELEDEMSKDRQALLEEFERRKKARQINVSTDDSEVKKNLRQLGEPICLFGEGPA
DRRTRLRELLASLGEDAIKKKHEDEERPSHPTERDTETTWYHEGPESLQIARSWIANYSL
PRAKARLDRARQELELPGATRTARRQELLKKLQALSIYCSQIGDTRPVSFCQFSPNSKVL
ATASWTGLCKLWSVPDCTLLRTLEGHTCNVSCIVFHPKATVSEEVFGESAGQTCVLASCA
SDGKLSQRTVYLIKIHGNMSSFLLHYFVTFLYAGSVKLWGGGNGQKPLAEVEGHEPHRVS
RIAFHPSGRFLGTCCFDASWRLWDLEQQAEVLHQEGHARAVHCISFQCDGSVTATGGHDS
FGRVWDLRTGRCIMFMEGHLKSIFGIDFSPNGFHLATASEDNSCKIWDLRKRSCIYTIPA
HTNLLSDVKYQRLEGQYLVTASYDNTAKIWSNKTWQPLKTLPGHDGKVMSVDVSPDHKFI
ASTSADRTFKLWAPENM
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacgacgaggatttagtttatgtgaagaagcaaaaaacagtccactatggatct
ttggaagaagcagaacgtattcggcttgctacagctgcagctgagtcttctgaggaagat
aaagatagtgcaaatgcaaatgatatgcctaccatttcagctatggctggaaatgtacat
atttcaaatgaatatatggaattggaggatgaaatgtccaaggatagacaagctttattg
gaagaattcgagcgaaggaaaaaggcgagacaaattaatgtgtcgactgatgattctgaa
gtaaaaaagaatttgagacaattaggagaaccgatctgtctcttcggagaaggtcctgca
gacaggcgaaccaggttgagggaattattagcaagtcttggtgaggatgcaataaaaaag
aagcacgaggatgaagagagaccttcacatcccacagaaagggatactgaaacaacctgg
tatcacgaggggccagaatcacttcaaatcgcacggtcctggatagcaaattattcactt
ccaagggctaaagcacggcttgatcgagcaaggcaagaattagaactacctggtgctaca
cgtacagcacgcagacaagaacttttaaagaaacttcaagcactaagcatatactgttct
caaattggagatacgaggcctgtttcattctgtcagtttagtccaaactcaaaggtactt
gctaccgcttcttggactggattgtgcaagttatggtccgtacctgattgtactctcttg
cgaactcttgaaggtcacacttgtaatgtcagttgtatcgtgtttcatccaaaagctaca
gtgagcgaagaggtttttggggaatctgcaggacagacttgtgtattggcgagttgtgca
tccgacggtaagttaagtcaacgcactgtatatttaataaaaatccatggaaacatgtca
tccttccttttacattatttcgtgacgtttctctatgcaggctcagtaaaattatggggt
ggcggaaacggacagaaaccattagctgaggtggaaggtcacgaaccacacagagtttct
cgaattgcatttcatccgtcaggccggttccttggaacgtgttgcttcgatgcatcatgg
cgtctttgggatttagagcaacaggctgaagttctacatcaagaaggacatgctcgagct
gtacattgtatcagttttcagtgcgatggcagcgtaactgcaacaggaggtcatgattcg
tttggaagagtctgggacctgcgtactggtaggtgtataatgtttatggagggacatttg
aaatccatatttggcattgatttttcaccgaatggtttccatctggcaaccgcgagtgag
gataactcctgcaagatttgggatctgcggaagcggtcttgcatatacacgataccagcc
catacaaatctactgtcggacgttaagtatcagaggctggagggtcagtatctagttacg
gcgtcctatgataacactgccaaaatctggtcaaataaaacgtggcaacctctgaagacc
ttaccaggccacgacggtaaagtaatgtctgttgacgtttcaccggatcacaaattcatt
gctagcacttctgccgacagaactttcaaactgtgggctcccgagaatatgtaa
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