Cephus cinctus (wheat stem sawfly): 107263309
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Entry
107263309 CDS
T07523
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
ccin
Cephus cinctus (wheat stem sawfly)
Pathway
ccin03018
RNA degradation
ccin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107263309
09123 Folding, sorting and degradation
03018 RNA degradation
107263309
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccin03019
]
107263309
03041 Spliceosome [BR:
ccin03041
]
107263309
Messenger RNA biogenesis [BR:
ccin03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107263309
mRNA degradation factors
5'-3' decay
Lsm complex
107263309
Spliceosome [BR:
ccin03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
107263309
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
BPL_C
SM-ATX
Motif
Other DBs
NCBI-GeneID:
107263309
NCBI-ProteinID:
XP_015585853
UniProt:
A0AAJ7BH11
LinkDB
All DBs
Position
Unknown
AA seq
92 aa
AA seq
DB search
MMTSSVSTNPSTLLPLELVDKCIGSRIHIIMKNDKEIVGTLQGFDDFVNMLLEDVTESEA
TPEGRRVTKLDLILLNGNNITMLVPGGEMPET
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgagttccgtgagcacgaatccatccacgttattgcctctggaattggtggat
aaatgcattggttcccgaatacatatcattatgaaaaatgacaaggagattgttggcact
ttacaaggctttgatgattttgtaaatatgttattggaggatgtgacagaaagcgaagca
actcctgaaggacgtagagttacaaaactggatttgattttacttaatggaaacaacatt
acaatgttagtaccaggaggagaaatgccagaaacatag
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