Cephus cinctus (wheat stem sawfly): 107263758
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Entry
107263758 CDS
T07523
Name
(RefSeq) protein PAT1 homolog 1 isoform X1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
ccin
Cephus cinctus (wheat stem sawfly)
Pathway
ccin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107263758
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccin03019
]
107263758
Messenger RNA biogenesis [BR:
ccin03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107263758
mRNA degradation factors
5'-3' decay
Decapping complex
107263758
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
107263758
NCBI-ProteinID:
XP_015586788
UniProt:
A0AAJ7BII6
LinkDB
All DBs
Position
Unknown
AA seq
733 aa
AA seq
DB search
MADSFFGFDTTLTQGSGLEDAIDGPPEEEDLGEEEEYDALNDETFGSDAAIGDWEQDHEK
LAQLTESKRHHQNLPLNKNGVDVDIEESLSHLVLDEKDGTTPRPGVWDSPSSLPLSQSQP
PRPLSTALKNARTVEELERGLMANRPPPGLSKLPHHPSQQQSGGPFLFDPLPLNEQLQIN
GIPPPRFPPGLGLPGPHPVVIPPNVRLPHPQFMQNPRLISNQGANMLRFHMPPHLMMQHG
NQRQPHHGSFNFPQPPHPNMGPPPFLRPEHPMMTPFSNNQMNHQQHSGPHSGNQRNQNNR
SFHSNEQQGNPQPFFKNNQYPHQNQRNNQRYHHHQHHLQGMNGIGGSGEYDEYAGLMSSR
EKQWLINIQLLQLNTNQPYIDDYYYTVFCDRQNKQNENQDQKDRKHHNNNGYHRDSRDRE
QPQHVLTKVVYTPTQFENSLGKLQCGSVTAPRKIIDMDVVPNNDPQQVPPPQQKDTKKTR
QLLLEIERLYTLQLKLEDMSNPLALLAEQQQQQQQQPEGETEVKPPKKTKPELISTLLAS
LLQLLRDDKLASMLSIRKGKTLLLRFLPYLSVTESSNQLSELWSTILRGLAVIGRRDAHL
LSNFYPEFRRWIQTITDFSVLQRLARGLTESVNQPTKNNSLAFALTNKFGVSVIASVLEQ
AEALFPVEDSVACEWSTFVVSIVERIGATPPSVAPCHPIAANTLNQHLNRIRSLKMERYA
PLELLLTDANPLR
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggcagactcttttttcggatttgatacaacacttactcagggtagtggcttagaagat
gctatagatggcccacctgaagaagaagatcttggtgaagaagaagaatatgatgcgtta
aatgatgaaacatttggctcagatgcagcaattggagattgggaacaagatcatgaaaaa
ttagctcaattaacggaatctaagcgacatcatcaaaatttacctctaaacaagaatgga
gttgacgtggacattgaagaaagtttgtcacacttggtattggacgagaaagatggtact
acaccaaggcctggtgtatgggacagtccctccagtcttcctttatcccagtcccagcca
ccgcgtcctttgtcaaccgccttaaaaaatgcccgcacggttgaagagctagaacgtgga
cttatggcaaatagacctcctccaggactcagtaaattaccacatcatccatcgcagcaa
caatcgggcgggccatttctatttgatccattaccgctgaatgaacaacttcagatcaat
ggcataccgccaccacggtttccccctggactgggcttacctggaccacatcctgttgtt
atacctcccaatgtgcgactaccgcacccacagttcatgcagaatcccagactgatatcc
aatcaaggtgcaaacatgctgagattccatatgcccccacatttaatgatgcagcatgga
aatcagagacagccacatcatggctcattcaattttccgcaaccgcctcatccgaacatg
gggccaccaccatttttgcgccccgaacatccgatgatgacaccattttctaacaatcaa
atgaatcatcaacaacactctggtcctcactcgggaaaccagcgaaatcaaaacaacaga
tcgtttcattccaacgagcagcaaggaaatcctcaaccgtttttcaaaaataatcaatat
ccacaccaaaatcagcgaaacaatcagcgatatcatcatcatcagcatcatctccaagga
atgaacggcattggtggttctggagaatacgatgaatatgctggtctaatgagtagtcgt
gagaagcagtggttgattaatattcaattattgcagcttaacactaaccaaccatatatt
gatgattactattacaccgtgttttgcgatagacaaaataagcaaaatgaaaatcaagac
cagaaagacaggaagcatcacaataacaatggataccacagagattcaagggacagagaa
cagcctcagcacgttctcactaaagttgtgtatacgccaacgcagtttgaaaattccttg
ggaaaactacaatgcggtagtgtaacagcaccacgcaagataatcgatatggatgttgtt
ccgaacaatgatcctcaacaagtccctcccccacaacaaaaggacacaaaaaagacccgt
caactactactagagatcgaaaggctgtacacgttgcaattgaaactggaggacatgagt
aatcccctggctttattagccgaacagcaacaacagcagcagcaacaaccagaaggtgaa
actgaagtaaagccacccaagaaaacgaaaccagaattaattagtacattgctagcgtct
cttcttcaactgcttcgggatgacaagttggctagcatgctcagcattcgtaaaggaaag
acattactacttcggtttttaccatacctaagtgtgacagaaagctcaaatcagttaagt
gaactgtggagcacaatccttcgcggattggcagtaattggccgtagagatgctcacttg
ctgtccaacttttatccagaatttcgtagatggatacaaaccataacggatttctcagta
ctacaacgtctggcccgaggactcaccgaatctgttaatcaacctacaaaaaacaacagt
ttggcttttgccctcactaacaagtttggtgtatccgtaatcgcttcggttctcgagcaa
gccgaagcactatttcctgtagaagactccgtagcgtgtgaatggtcaacattcgttgtc
tctatcgtggaaagaatcggtgcaacaccgccaagtgttgcaccctgtcatccaatagct
gcaaacacgcttaatcagcatttgaaccggattcgcagtttaaaaatggaaaggtacgcg
ccgctagaactactgttaaccgacgcgaatcccttgcgatag
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