Cephus cinctus (wheat stem sawfly): 107264061
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Entry
107264061 CDS
T07523
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
ccin
Cephus cinctus (wheat stem sawfly)
Brite
KEGG Orthology (KO) [BR:
ccin00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccin01009
]
107264061
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccin03019
]
107264061
04131 Membrane trafficking [BR:
ccin04131
]
107264061
03036 Chromosome and associated proteins [BR:
ccin03036
]
107264061
Enzymes [BR:
ccin01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
107264061
Protein phosphatases and associated proteins [BR:
ccin01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107264061
Messenger RNA biogenesis [BR:
ccin03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
107264061
Membrane trafficking [BR:
ccin04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
107264061
Chromosome and associated proteins [BR:
ccin03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
107264061
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
MgtT
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
107264061
NCBI-ProteinID:
XP_015587407
UniProt:
A0AAJ7BJ73
LinkDB
All DBs
Position
Unknown
AA seq
1222 aa
AA seq
DB search
MSVNESNLEEGAQGLCLYKDTSYLFHRPHVISWSYSGTHGNLLTAAKQLADSEIQLIKAI
EGSRKSQRKLVKGTMSTTTKAVTGKKSARVSNARPSAALIAAKRDAAQRKVLQGKKSNNI
FIQDIYQKAIDAMNMVRKDTGLVFDRRMAEHLCLWDKAYPECPERFTKVLEKCEQYGLVD
RCKFIESRSANEDELLLKHTQEQIDFLKATDRCTDAEKLEKLSSKYDAIYIHPSTYRLSL
LAAGSTINLVESICKGDVQNGMAIIRPPGHHAMKAEYCGYCFFNNVAIATQTLLEKNLAS
KILIVDWDVHHGQATQQMFYNDPRVVYFSIHRYEHGKFWPNLRESNYDYVGDGPGEGYNF
NVPLNKTGMTNADYLAIFQQVLLPMAYEFQPDIVIVSAGYDAALGCPEGEMEVTPACYAH
LLSSLLSLAGGKVAVVLEGGYCLKSLAEGAALTLRALLGDPCPMLRSLDPPCASIRETIL
NIIYIHKPYWNCYQYQETYSINSTTNNEEENNNRHLPTVIYKGDETKPDFYETRNCYPVQ
SPELLQEIDRKLNFLIQFTNLTKAPNRVCVVYDPRMLKHINVPDDSHPEKPERISNIYTK
HEEYGLLKRCHVLQGRVATEEELLLAHSKDHIDIIKKTADTKLRDLVKQASDLNSVYLHP
ETWTSACVSAGSLLQVVDSVLNSESQSGVAIVRPPGHHAEEDAPCGFCIFNNITIAARYA
VQYHNLKRVLIVDWDIHHGNGTQSILEQDPTILYISVHRYDNAGFFPNSKKANYTVVGSG
PGEGFNVNIPWNKKGMGDAEYIAAFQQIVMPIAYQYNPELVLVSAGFDACNGDPLGGCKV
SPEMYGHLTHWLSSLANGRVILSLEGGYNINSISYAMTMCTKALLGDPPAVLDAGQAPCT
SAINTINNVLKTHKQFWPNLAFQMSLPKEKVLPRIKPSQKHSEESLRVEGGAGHKSECKI
AFEEIESEKLDFNLSFDKHNLNTVTDEEILKLQNEVENMKIRSLKTVGRNTEMIGDIPGS
TTGAQEETGTCFSARGFKECINPTEKKDVQNSKDSRAGTSDGAGSSREGQSEESSLASAV
PTTNLFDYLSDNLQALVDGEMFAVVPLRECPHLNTVRDVPPSGIDVRSPCTECNSAAENW
ICLQCYTVHCARSVNQHAVTHSQVAEHPMTLSFSDLSVWCYGCEAYIDNPRLYAARNAAH
RSKFNQDLPWTYSDPALVMDTH
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtcaatgagtcaaatcttgaggaaggggcacaaggcctctgcctatacaaggat
acatcttacctttttcatcgcccacacgttatttcctggtcgtattctgggacgcatgga
aatctcttaactgctgccaagcagttggcagacagtgaaattcagctaataaaggctata
gaaggttctaggaaaagtcaacggaagcttgttaaaggaaccatgtcaactacaacgaag
gctgttactgggaaaaagtcagccagggtctcaaatgcgagaccttctgctgctctaatt
gctgcaaaacgggatgctgctcaacgaaaagttctacaaggaaagaaatcaaataacatc
ttcatccaagatatttatcaaaaagctattgatgctatgaacatggttcgaaaagacact
ggcctggtttttgatcggcgcatggctgaacatctgtgtctatgggataaagcatatcca
gaatgtcctgaaaggtttacaaaggtcttggaaaaatgtgagcaatatggcctagtagat
agatgcaaatttattgaatcaagatctgcaaatgaggatgaattactactgaaacacact
caagaacaaatagattttttgaaagcaacagataggtgtacggacgcagaaaaacttgaa
aaattgtcttccaaatatgacgcaatatacatccatccgtcgacttaccgattgtcttta
ttagctgctggatcaacaataaatttggtagaaagtatctgcaaaggagatgtacaaaat
ggaatggctattatcagacctcctggacatcatgcaatgaaagcagaatattgtggatac
tgtttcttcaataatgttgcaattgcaacgcagacactcttagaaaagaatttagctagc
aaaattttaatcgtagattgggacgtgcatcacggtcaggcgacacaacaaatgttttat
aatgacccgcgagtcgtctacttctcaattcaccgttacgaacatggtaaattctggcca
aatttaagagagtccaattatgattacgtcggagatggtccgggagagggttacaacttt
aacgtgcctttaaataaaaccggcatgaccaacgctgattatcttgcaatatttcaacag
gttttgctaccaatggcttacgagtttcaaccggatattgttatagtctcagctggttat
gatgcagctcttggttgtccagagggagaaatggaagtaacaccagcatgctatgcacat
cttttatcctcactgctaagtttagcaggtggaaaagttgctgtggtattggaaggtgga
tattgcttaaagtctttggccgaaggtgcagcattaacattaagagctttattaggtgat
ccgtgtccaatgttgcgttcgctggatccaccatgtgcgagcatacgtgaaacaatcttg
aatatcatttatattcataaaccatattggaattgttatcagtatcaagaaacttatagc
attaatagtactacaaacaacgaagaagaaaacaacaacagacatttacctacagttatt
tacaaaggtgatgagacaaaacctgatttctacgaaacacgaaactgttacccagtgcag
agtcccgaacttttacaagaaattgatagaaaattaaatttcttgatccaattcactaac
ctgactaaagcaccgaatagagtgtgtgttgtgtacgatccgagaatgctcaagcatatc
aacgttccagacgattctcatccggaaaaaccagagagaatatctaacatttatacaaag
cacgaggagtacggtttactaaaacgatgtcacgttttgcagggaagagttgctaccgaa
gaggaactgcttttggcacattcaaaagatcacatagatataattaagaagactgctgat
acaaagttgagagacttagtaaaacaagcgtctgatcttaattccgtttatttgcatcct
gagacctggaccagtgcctgtgtttctgctggttcattgcttcaagttgttgatagtgta
ttgaatagtgaaagtcaatcaggagtggctattgtcagaccacctggtcatcatgctgaa
gaagacgctccttgtggtttctgcatctttaataatatcacaattgcagctagatatgct
gtgcaatatcataatttgaaaagggtattgatagtagattgggatattcatcatggcaat
gggacgcaaagtattctggagcaagatcccactattctttatatatcagtgcataggtat
gataatgctggattctttccaaattcaaaaaaggcaaattatactgttgtcggctctgga
cctggagaaggattcaatgtaaacattccatggaataagaaaggaatgggtgatgctgag
tatatagcagcatttcaacaaatcgtaatgccaatcgcctatcagtacaatccagaatta
gttctggtttcagcaggatttgatgcctgcaatggtgatccattaggaggttgcaaagtg
tctccggaaatgtatggacatttaacacattggctgtcatcattagcaaatggtcgagtt
atacttagtctagagggtggttacaatattaactccatttcctacgctatgactatgtgt
accaaggctcttcttggagatcctcctgcagtgttggatgctggccaagcaccgtgtaca
agtgcaattaatacgataaacaacgttctcaaaacgcataagcaattctggccgaatttg
gcctttcaaatgtccttgccaaaggagaaagtacttccaaggattaaacccagtcaaaaa
cattccgaagagagcttaagagttgagggtggtgccggacataagtcagaatgcaaaatt
gcttttgaggaaattgaaagcgagaagctagattttaatctttcgtttgacaaacataat
ttaaacactgtgacagacgaagaaatattgaaactgcaaaacgaagtggaaaatatgaaa
attagaagtttaaagaccgtcggacgtaataccgaaatgatcggcgatattccaggcagc
acaaccggtgcccaagaagaaactggaacttgtttttcagctcgtggcttcaaagagtgt
ataaatccaacggagaagaaagatgtacagaactcgaaggacagtcgtgctggtacgagt
gatggtgctggtagtagcagggaaggtcagagtgaagaaagcagcttggcaagtgctgtt
cccactacaaatctttttgactatctctcagacaatctgcaggccctggtagatggagag
atgtttgcagtagtacctttaagagagtgcccacacttgaataccgtgagagatgtacca
cccagtggcatagatgttcgatcaccttgcacagagtgcaacagtgctgctgaaaattgg
atttgtctccagtgctacacagtacactgtgctcgtagtgttaatcagcatgctgtgact
cacagtcaagtggcagaacaccccatgaccctcagcttcagtgacctatcggtttggtgt
tatggatgcgaagcctacattgacaatccacgattatacgcagcacggaatgctgcacac
cgtagcaaattcaatcaagatctcccatggacatacagtgatccagcactagttatggac
acacactga
DBGET
integrated database retrieval system
