Cephus cinctus (wheat stem sawfly): 107264658
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Entry
107264658 CDS
T07523
Name
(RefSeq) collagen alpha-1(IX) chain isoform X1
KO
K06823
collagen type XVIII alpha
Organism
ccin
Cephus cinctus (wheat stem sawfly)
Brite
KEGG Orthology (KO) [BR:
ccin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccin04147
]
107264658
00535 Proteoglycans [BR:
ccin00535
]
107264658
00536 Glycosaminoglycan binding proteins [BR:
ccin00536
]
107264658
Exosome [BR:
ccin04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107264658
Proteoglycans [BR:
ccin00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
107264658
Glycosaminoglycan binding proteins [BR:
ccin00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107264658
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
Laminin_G_3
DUF1554
Motif
Other DBs
NCBI-GeneID:
107264658
NCBI-ProteinID:
XP_015588632
UniProt:
A0AAJ7BKZ4
LinkDB
All DBs
Position
Unknown
AA seq
1165 aa
AA seq
DB search
MRLNFRTLLLISAILNATSSEADFFSEKRESEFDLLNAAGYPENDKYQYMDDGLDGFPAF
VFRPGSDVKQPYRLYLPEKLPAEFTLVATFKSMSSSSSYLFAVLNPFETVVQLGIRLSEG
PGQNQNISLVYTNSDEHTHSEEIAKFTVPPLTKRWSKIVFKVSTTDVTLYLNCHEMSRQR
ITRIPQELVFDTASTLYIAQAGPNIQGKYDGVIQSLKLYSGHPQDLVKCSRDFDFFPGSG
SGDYNSSEGSGDLSDDDQFGRDNYEDEEGNKPPPFITPPPPNPESKGPKGDKGDKGDKGE
SVRGPPGPPGPPGTGYDPNDEDFPMKLPMGPAGPKGEPGSCTCNATEIMASFTLPKMLQG
PKGEPGLPGKEGKQGQMGLTGAAGPPGERGQQGPPGARGDKGDLGTTGPEGPQGQKGEPG
RDGVPGEKGAQGPPGPPGKGEFSGHDPSWKPRSIYRAEGITMRPGLPGQKGDAGTPGSTG
PKGEPGISGSKGVKGEPGLKGSKGDHGQNGPVGLQGFKGEPGAPGAPGVPGAPGENGKPA
EKGAKGDSGPEGKPGPPGPAGPPGTGGLNVGDIGGGEKGDKGETGPRGYKGDLGTKGEKG
DRGDLGAAGIPGMNGIQGPQGDKGEPGRDGVPGVAGSAGSKGERGERGPPGVATVAGSGD
YVTIKGEKGAEGKRGRRGRPGPPGPVGPPGKPGTNGEIGLPGWMNTIKGRPGTPGIPGSQ
GPHGPKGEKGEAGAPSPYGVSVGIKGDKGDKGDKGDDGFPGSPGQPGRDGQRGPAGPPGT
PSQGNYVPVPGPPGPPGPPGPPGLSLTGQKSDSGRNHMFGERDYYGVRPGPRSSLDELKA
LRELKQLKELKEHLGGSATSTKVHHETTTKIVPGAVTFQNTAAMTKMSSVSPVGTLAYII
DEEALLVRVNNGWQYIALGSLLPITTPAPSTTASPPVKPPFEASNLINQIPIKADGTGWY
PRMLRMAALNEPFTGDMHGVRGADYACYRQSKRAGFRGTFRAFLSSRVQNVDSIVRLGDR
DLPIVNIKGDVLFNSWKEMFNGNGAYFSQSPRIYSFNGKNILTDFSWPEKVAWHGSHKLG
DRAMDTYCDAWHSSSSDRYGLASPLTGGRLLEQVRYSCNNKFALLCIEISSEHDKRKRRN
VDDDVDEVELTEEDYKEHLEEIMKN
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcttaatttcagaactctcttgctgatctccgcgatcctcaatgccacgtcgagc
gaggctgactttttttccgaaaaaagagaatccgagtttgatctactgaatgctgctggt
tatccggaaaatgacaaataccaatatatggacgatggtttggatggtttcccggcgttt
gtttttcggcctggctccgacgtcaaacagccgtacagactgtacttgcctgaaaaattg
ccagcggaatttaccctcgttgcaactttcaaatccatgtcctccagtagcagctacctc
tttgcggttcttaaccctttcgagacggtcgtccagcttgggataagattgtcggaggga
ccaggacaaaatcaaaatatttctctggtgtacacaaactcggacgaacacacgcattcc
gaggaaatagcgaaattcacggtgccgccactgacgaagcggtggtccaagattgtcttc
aaagtctcgactacggacgtcactctttatttaaattgtcacgaaatgtctcggcagcgg
atcaccaggatcccacaggaattggttttcgacactgcgagcaccctttacatcgctcaa
gctggaccgaatattcaggggaagtacgacggcgtcattcagtcgctgaaactttattcc
ggccaccctcaggatctcgtcaagtgcagtcgtgattttgacttctttccaggatccggc
tcgggtgattataactcgagcgagggctcgggtgatctttccgatgacgatcagtttggt
agagacaattacgaggatgaagagggtaacaagcctccgccatttattaccccaccacca
cctaatccagaatccaagggaccaaagggtgataagggagacaagggtgataagggggag
agcgtcagaggtccacctggacctccgggtcctcccgggacaggatatgatcccaacgac
gaagatttcccgatgaaactaccgatgggtccagcaggacccaagggtgagcctggaagc
tgcacctgtaacgcgacagaaataatggcctccttcacactaccaaaaatgctacaaggt
ccgaagggtgagccgggattacctggaaaggaaggcaaacaagggcaaatgggtttgacg
ggagccgcggggccaccgggcgaacgaggacagcaaggtcctccgggtgcaagaggcgac
aaaggtgacctaggaacaacgggaccagaaggtccgcaaggtcaaaaaggtgaaccagga
agagatggggtaccaggggaaaagggggcgcagggtccacctggcccaccagggaaagga
gaattttccggtcatgaccctagctggaaaccacgaagcatctatagagcggaaggaatc
acgatgaggcctgggctaccgggtcagaaaggggatgcaggtaccccaggaagcacagga
cccaagggcgagccaggaatatcaggttcgaagggcgtgaaaggcgaaccaggactgaaa
ggatccaaaggagatcatggacagaatggtcccgtgggtttacaaggattcaagggagag
cctggtgctccgggtgcgccaggggtacctggtgcaccaggagagaacggtaaaccagcg
gaaaagggtgcgaagggcgactctggccccgaaggaaagccaggccccccgggacctgct
gggcctcctggaacgggtggactgaatgtaggagacataggtggtggtgaaaaaggcgat
aagggcgagacaggtcctcgcggttacaagggcgatttagggactaagggtgaaaagggt
gataggggagacttgggagctgctgggattccgggaatgaacggaattcaaggtcctcaa
ggtgacaagggtgagcccggtcgggatggagtaccaggagtagctggaagtgccggcagt
aagggtgaaagaggtgaaagaggtcctccaggggtggcaaccgtagctggttccggcgat
tacgtaacgataaaaggcgaaaagggtgctgaggggaagcgcggcagaagaggacgtcca
ggaccaccgggtcccgtaggaccacctgggaaacctggtactaatggagaaataggtctt
ccagggtggatgaacaccataaagggtcgccctggtacgcctggaattccggggagtcaa
ggtcctcacggtcccaaaggagaaaagggtgaggctggagcaccgagtccttatggagtc
tcggttgggatcaagggagacaaaggagacaaaggagacaaaggggatgatggattcccc
gggagtccaggacagcctggacgtgacggccagagaggaccagcaggaccccctggtaca
ccatcgcagggaaattacgtacccgtaccaggacccccaggtccaccgggacctcctggt
ccgccaggattgtcactcacgggacaaaagagcgactcaggtcgaaatcacatgtttggc
gagagggattactatggcgtccggccaggacccagaagtagccttgacgagctgaaagct
ctccgggaactcaaacaactgaaagagttgaaagagcatttgggtggctccgcaacctcg
acaaaagttcaccatgagaccacgacgaaaatagttccaggagcggtgacattccagaac
acggcagccatgactaagatgtcgagcgtcagtcccgtgggtactttggcttatatcata
gacgaggaagcattgttggtcagagtgaacaacggctggcaatatatagcgctgggctct
ctgttaccaataacgacgcccgcgccgtcgacaacagcgtcgcctcccgtgaaaccacct
tttgaagcatctaatttgattaatcaaattccgatcaaggccgacggcactgggtggtat
ccaagaatgttacgcatggcagcccttaacgagcccttcacgggcgacatgcacggtgtc
aggggtgccgattacgcttgttatcgacaatccaagcgagccggatttcgagggacattt
agagcctttttgagttcgagggtgcaaaacgtcgacagtatcgtgagactgggggatcga
gatctgccgatcgtaaatataaagggtgacgttctcttcaattcctggaaagagatgttc
aatggcaacggggcgtacttctcccagagtccaagaatctattcgttcaatggcaagaat
atactaacggacttttcatggcctgaaaaagtagcctggcacggatcccacaagcttggc
gatcgggcgatggacacctactgcgacgcctggcattccagcagttccgatcgttacggt
ttggcgtccccgttgacaggtggtcgtcttctcgagcaggtacgttactcctgcaacaac
aaattcgccctactctgcatcgagatcagcagcgagcacgacaagaggaaacgtcgtaac
gtcgacgacgacgtggatgaggtcgagttgacggaagaggactacaaggaacacctggag
gagattatgaagaactga
DBGET
integrated database retrieval system
