Cephus cinctus (wheat stem sawfly): 107265087
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Entry
107265087 CDS
T07523
Name
(RefSeq) pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
ccin
Cephus cinctus (wheat stem sawfly)
Pathway
ccin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107265087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccin03041
]
107265087
Spliceosome [BR:
ccin03041
]
Complex C
Other components
Step II factors
107265087
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_EIPR1
WD40_RFWD3
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_SCAP
PQQ_2
WD_LRWD1
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
107265087
NCBI-ProteinID:
XP_015589614
UniProt:
A0AAJ7FFQ9
LinkDB
All DBs
Position
Unknown
AA seq
552 aa
AA seq
DB search
MDTTISSSETPTFTSKPITSLSLKICSAPEVIPTGKELCVQHIDSTSKELLHNPKFEELF
APDVGPENPFKTQQQRAAKNMLSGYVEQAHISEFQFENQRRTFQSYGYALDPTVDGSAEE
GKTLIGAKEVAEESGAKTVFESTTLRPADKRKRNRNDDPADIEGFLGPWGGYVDERRVVK
PSDEEAAELEEILAKRNKRGKQTEEKPLEEKTVLHIKDSVDYQGRSFLHAPQDVGVNLRS
ESPPERCFLPKAQIHTWEGHTKGISQIRWFPKTAHLLLSCSMDCRVKLWEVYKDRRCVRT
YYGHRQAVRDISFDNDGKRFLSAGYDRYVKLWDTETGACISRFTSRKIPYCAKFNPDPDK
QHLFVAGTSDKKIICWDIRSGEITQEYDRHLGAVNTITFVDENRRFVTTSDDKSLRVWEW
DIPVDMKYIADPTMHSMPAVTPSPNQKWLACQSMDNKIVIFSALNRFKMNRKKTFTGHMV
AGYACGLDFSPDMSYLVSGDADGKCYVWDWKTTKLYKKWKAHDGVCIATLWHPHEPSRLA
TAGWDGKIKYWD
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggacacaactatttcatcaagtgaaactcctacttttacttctaagcccatcacttct
ttatctctgaaaatatgttctgctcctgaagttatccctacaggaaaagaattatgtgtt
caacatatagactccacttcgaaggaactactgcacaatccaaaatttgaagagcttttt
gcacctgatgtcgggccagaaaatccctttaagacacagcagcaaagagctgccaaaaat
atgctctctggttatgtagaacaggctcatattagtgaatttcaatttgaaaatcaaaga
agaacatttcaaagttatggctatgcattggatcctactgtggacggtagtgctgaagag
ggtaaaactttaattggtgctaaagaagtggccgaggaatctggtgcaaagactgtattt
gaaagtactacattaagacctgctgataaaagaaaaaggaatagaaatgatgatccggca
gatatagagggatttttaggtccatggggtggatatgtggatgaaaggagagtagtgaaa
ccatctgatgaagaagctgcagaacttgaggagattttagctaaaagaaacaagagaggc
aaacagacagaagagaaacctcttgaagaaaaaactgttttgcatatcaaggacagtgtt
gactatcaaggacggtcgttcttacatgcacctcaggatgtgggtgttaatctcaggtca
gagtcaccacctgaacgttgtttcttgccgaaggcacaaatacatacttgggaaggccat
acgaaaggaatatcacaaattcgatggtttccaaaaactgctcatttgttactgtcatgc
agtatggattgcagagtaaagttatgggaagtttataaagatagaaggtgtgttcgtact
tactatggtcatcgtcaagctgttcgcgatataagttttgacaatgacggcaaaaggttc
ttatctgctggttatgatcgttatgtcaaattatgggatactgaaactggagcatgtata
agtcgttttacaagcagaaagattccatattgtgctaaattcaatcctgacccagacaag
cagcatctatttgtagcaggaactagtgacaagaaaatcatttgctgggatatcagatct
ggcgaaataacacaagaatatgatcggcacttgggtgctgtgaatacaatcacattcgtt
gatgaaaatcgcagatttgttactacctcagatgacaaaagtcttcgagtatgggagtgg
gacattccagttgatatgaaatacattgctgatcctacaatgcattcgatgcctgcagtg
acaccatctccaaatcaaaaatggcttgcatgtcaaagcatggataataagattgtcata
ttctcagcgttaaaccgatttaaaatgaatcgcaagaagactttcacaggacacatggta
gctgggtacgcttgtggtcttgacttctctccagatatgagctaccttgtatccggtgat
gctgatggcaaatgttatgtgtgggattggaaaacaactaagctgtataaaaaatggaaa
gctcatgatggtgtatgcattgctacactttggcatcctcatgaaccgtcacgtctagcc
actgctggctgggatggaaaaataaagtattgggattaa
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