Cephus cinctus (wheat stem sawfly): 107265658
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Entry
107265658 CDS
T07523
Name
(RefSeq) ATP-dependent RNA helicase dbp2 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
ccin
Cephus cinctus (wheat stem sawfly)
Pathway
ccin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107265658
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccin03041
]
107265658
03009 Ribosome biogenesis [BR:
ccin03009
]
107265658
Enzymes [BR:
ccin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107265658
Spliceosome [BR:
ccin03041
]
Complex A
U1 snRNP components
U1 related factors
107265658
Complex B
107265658
Ribosome biogenesis [BR:
ccin03009
]
Eukaryotic type
Pre-60S particles
Helicases
107265658
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
107265658
NCBI-ProteinID:
XP_015590833
LinkDB
All DBs
Position
Unknown
AA seq
619 aa
AA seq
DB search
MFNRDRDQSRGRRGGGRGNGRGGSDGSHGNGSGRFSSRGGSSIGGNGGGSGRGGLKGKQP
GGALRKLNWDIRSLEPLRKDFYVEHPAVRNRSPEEVSKFRQDAEITVKGDDVPNPIQYFE
EGNFPSYVMEGIRRQGYAQPTAIQAQGWPIALSGKDLVAIAQTGSGKTLGYILPAIVHII
HQPRITTGDGPIALILAPTRELAQQIQEVANCFGESAAVRNTCIFGGAPKGPQAHDLERG
IEICIATPGRLIDFLERGTTSLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLM
WSATWPKEVRALAEDFLTNYTHLNIGSLTLSANHNIIQIVDVCQEFEKDLKLYRLLQEIG
TEKENKTIIFVETKRKVDDITRNIRRDGWQALSIHGDKNQQERDHVLQEFRSGRAPILVA
TDVAARGLDVDDVKYVINFDYPSSSEDYIHRIGRTGRRRQTGTAYAFFTSHNMKHAGDLI
EVLREAGQNINPRLSEMAEMAKSSSFGGRSGKRFGGPSGGSDRGGGRRGGSGEGRGRGGG
SSSRGRGGSSGTRGGGSYQSSSAGYTTSEYNYSTGKPSNQISSSYGYSTQRDYGQGNMPQ
NYGGGDNYGNSYQYRGSAY
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgttcaatcgtgacagagatcagagcagaggtcgtcgaggaggtggcagaggaaatggt
cgaggtggtagtgatggaagtcacggaaacggaagtggaagattcagtagtaggggcgga
agtagtatcggtggaaatggaggcggcagtggacgtggtggtttaaagggtaaacaacct
ggtggtgctctaagaaaattaaactgggatattcgttccttagaaccattgcgaaaagac
ttttacgtagaacatccggctgttagaaaccgatcaccggaggaggtcagtaaatttcga
caggatgctgaaatcactgttaagggagacgatgtacctaatcctattcaatactttgaa
gaagggaattttccatcttacgtaatggaaggtataagaagacaaggatatgctcagcct
acggctattcaagctcagggatggcctatagcactaagtggaaaagaccttgtcgctatt
gctcagactggttctggaaaaactttaggatacattctaccagccattgtccacatcata
catcaaccacgtataaccactggtgatggtcctattgcccttatcctagccccaactcgt
gagctagctcagcaaattcaagaagtagccaactgttttggtgaatcagcagctgtaagg
aacacctgcatatttggtggtgcaccaaagggtccacaagcacatgatttagagagagga
atagaaatttgcatcgccacaccaggtcgtctcattgatttcctagaacgtggtaccacc
agtctacgcagatgcacatatctcgtgctggacgaagctgacagaatgttagacatggga
ttcgagccacaaataagaaaaataatagaacagattcgacctgatcgtcaagttctaatg
tggtctgcgacatggccaaaggaagtgcgagcattggctgaagattttttaacaaattat
actcacttgaatattggttctttgaccctttccgccaatcacaatatcatccagatcgtg
gatgtttgtcaggaattcgaaaaggatctcaagctgtacaggctgcttcaagagataggc
accgaaaaggagaataagacaatcatatttgtggaaacaaagcgcaaagttgacgacatc
acgagaaacattaggcgtgacggttggcaagcattaagtatccatggcgacaagaatcag
caagagagagatcatgtgttacaagaattccgaagtggacgcgctccaatactggtagct
acggacgtagccgcacgtggtttggatgtggatgacgttaaatatgtgataaatttcgat
tatccctcatcgtccgaggactatatacatcgtattggacgtactggcaggagacgacaa
accggaacagcttatgcttttttcacgagtcacaatatgaaacacgccggcgatctgatt
gaggtcttgcgtgaagcaggacaaaacatcaatccgcgactgagtgaaatggctgagatg
gcaaagtcaagcagttttggaggtagaagtggcaagagatttggaggaccatccggagga
tccgacagaggtggaggaagacgcggtggcagtggagaaggcagaggacgtggtggcgga
agttcctccagaggacgaggaggtagtagtggtactcgtggtggaggatcttaccaatct
tcatcggccggctataccacatctgagtacaattactcgactgggaaaccgtctaatcaa
ataagttcaagctatggctatagcactcaaagggattatggacagggtaatatgccgcag
aattatggcggcggtgataattatgggaatagctatcagtacagaggttccgcgtattaa
DBGET
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