Cephus cinctus (wheat stem sawfly): 107266395
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Entry
107266395 CDS
T07523
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
ccin
Cephus cinctus (wheat stem sawfly)
Pathway
ccin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107266395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccin03041
]
107266395
Enzymes [BR:
ccin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107266395
Spliceosome [BR:
ccin03041
]
Complex C
Other components
Step II factors
107266395
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
GIPC1_GH2
nSTAND3
AAA_30
AAA_16
PhoH
TsaE
Motif
Other DBs
NCBI-GeneID:
107266395
NCBI-ProteinID:
XP_015592320
UniProt:
A0AAJ7BS80
LinkDB
All DBs
Position
Unknown
AA seq
1143 aa
AA seq
DB search
MAEEVEKLEHLSLVSKICTELENHLGMNEKVLAEYIIHLAEKNDTFESFKKVLLENGAEF
SDSFMANLLRIIQHMKPPKGRSAGKSQGPNAPKDDLADKFPGLAIPNEKLAKKENDEDIV
NDAMASLEAFAPSSSKPNESDSRKVKTEKASDIDDGSDNRHRRNRSRDRRRHRSRSPNNR
RDRRHRSRSHSRKRHRSRGRGRSNERRRSQERRRSQERRRSRDHRRSRSHDRSRSRSRDY
KRSRFPKPSVVVGHKNSHNIKDSEEDVGHESNRAIAERKVEEEETRLRNPDRPTSLLELQ
GHLDEDETYSRKRVQRLSSPEKWEIKQMLAASCIDRSELPEFDMETGILPREDDEEEDVE
IELVEEEPPFLHGHGRALADLSPVRIVKNPDGSLAQAAMMQSALAKERREQKILQREQEM
DSAPTGLNKNWIDPLPNAESRTLAANMRGIGLQTQDLPEWKKHVIGGKKSSFGKKTNLTL
LEQRQSLPIYKLREDLVKAVTDNQILIVIGETGSGKTTQITQYLAEAGFTARGKIGCTQP
RRVAAMSVAKRVAEEFGCRLGQEVGYTIRFEDCTGPETSIKYMTDGMLLRECLMDLDLKT
YSVIMLDEAHERTIHTDVLFGLLKQAVGRRPDLKLIVTSATLDAVKFSQYFFEAPIFTIP
GRTFEVEVMYTKEPETDYLDAALITVMQIHLREPPGDILLFLTGQEEIDTACEILYERMK
SLGPDVPELIILPVYSALPSEMQTRIFEPAPPGSRKVVIATNIAETSLTIDGIYYVVDPG
FVKQKVYNSKTGMDSLIVTPISQAAAKQRAGRAGRTGPGKCYRLYTERAYRDEMLPTPVP
EIQRTNLATTVLQLKTMGINDLLHFDFMDAPPVESLIMALESLHSLSALDNEGLLTRLGR
RMAEFPLEPNLSKMLIMSVHLQCSDEILTIVSMLSVQNVFYRPKDKQALADQKKAKFNQA
EGDHLTLLAVYNSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAGK
NTVRIQKAVCSGFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTT
KEYMREVTTIDPKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLYNKYEEPNSWRISRVRR
RRN
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagaagtggaaaaattagagcacctttcgttggtgtcaaaaatatgtacagaa
ctggaaaaccatttgggaatgaacgagaaagttttagccgaatatattatacacttggca
gagaaaaacgacacttttgagagcttcaagaaagtccttcttgaaaatggagctgagttt
tcagattcgtttatggcaaatcttttacgcattattcaacatatgaagccaccaaaaggt
cgatcggcaggaaaatctcaaggtccaaatgcaccaaaggatgacttagcagataaattt
ccaggtttggcaataccaaatgagaagttagcgaagaaagaaaatgacgaagacattgtg
aatgatgcaatggcttcattggaagcttttgcaccatcaagctcaaaacctaatgaatca
gactcacgtaaagttaaaactgagaaagcatcagatattgatgatggttcagacaataga
catcgaagaaatcgctctagggatagacgaagacatcgttctagatcacccaacaatcga
agggatcggcgacatagatctagatcacactcaaggaaacgtcataggtcacgtggtcgg
ggtagatctaacgaacgcagaagatcccaagaacgaagacgatctcaagaaagaagaagg
tcccgggatcatagaagatcacgatcccacgatcgaagtagatcacgttcgcgtgattat
aagagatcacgtttccccaagccatctgtcgttgttggacacaagaattcacacaatata
aaggattcagaggaagatgtagggcatgagtcaaatcgtgcaatagctgaaaggaaagtt
gaagaggaggagacacgtctcaggaatcctgatagaccaacatccttgcttgagcttcaa
ggacacctggatgaagatgagacatactcaagaaaacgtgttcagagattatcctcacca
gaaaagtgggaaatcaagcagatgttggcagcttcctgtatcgataggagcgaactgcct
gaatttgacatggaaacagggatcttgcctcgagaagacgacgaagaggaagatgtcgaa
attgaattagtcgaggaggaaccgccatttctacatggacatggtagagccctagcagat
ctcagtcctgttaggattgtaaagaatccagatggttccctggctcaagcagcaatgatg
caaagtgccctagccaaggagagacgcgaacagaaaatattacaaagggaacaagaaatg
gattctgcacccactggactcaacaagaactggatcgatcctttaccaaatgcggagagt
agaactttggcagcaaatatgaggggtattggtttacaaactcaagatcttcctgaatgg
aagaaacacgtaatcggtgggaaaaaatcctcatttggcaaaaagacaaatttaactctt
cttgagcaacggcaaagtctgccaatttataaacttcgtgaagatttggtaaaagctgta
accgacaatcagatccttatcgttattggtgaaacggggtctggaaagaccacacagata
acacaatatctagcagaagctggtttcactgctcgtggaaagattggttgtacacagcct
agaagagttgcagccatgtcagtggctaaaagagtggcagaagaatttggttgtcgacta
ggacaagaagttggatatactattcgtttcgaagattgtactgggccagaaactagcata
aaatatatgacagacggtatgctgcttcgagagtgtctcatggatcttgatttaaaaact
tattccgttataatgttggatgaagctcatgagagaacaattcatacagacgtactattt
ggccttttaaaacaagctgtaggacggcgacccgacttaaaattaatagttaccagtgca
actttggatgctgtaaaattttcacaatatttctttgaagctccaattttcactattcct
ggtaggaccttcgaagtcgaggttatgtacacaaaggaaccagaaacagattacttggac
gctgcgcttataacagtaatgcaaattcatttgcgagaacctcctggtgatattttactt
ttcttaactggtcaagaggaaattgacacagcatgtgagattctctatgaacgaatgaaa
tctcttggcccggatgttcctgaattaattattcttcctgtgtactcggcattgccttcg
gaaatgcaaacaagaattttcgaaccagcaccacccgggtcacgaaaagtcgttatcgcg
acaaatatcgcagagactagtttaacgatcgatggcatttattacgtcgttgatcctggt
tttgttaaacaaaaagtttacaattccaaaactggaatggacagtcttatagtaacacca
attagtcaagctgctgctaagcaacgtgctggacgtgcaggtagaaccggacctgggaaa
tgttatcgactttatacggagcgagcttacagagatgaaatgttgcctacaccagttcca
gaaatacagagaacaaatttagcaacgacggtcttgcaattgaagactatgggtatcaat
gacttattgcattttgatttcatggatgcaccacctgttgaatctttaataatggctcta
gagtccttgcatagtcttagtgctttggataatgaaggtttactgactcgacttggacgt
agaatggcagaatttccattggaaccaaatctttcaaaaatgttaataatgagtgttcat
ttgcaatgttcggacgagatcctgacgatagtgagcatgctctctgtgcagaatgtcttt
tacagaccaaaggataagcaagcattggctgatcagaagaaggctaaattcaatcaagcc
gaaggagatcatctcacactactagctgtttataattcttggagaaataacaaattcagt
aatgcttggtgctatgagaattttgtacaaattagaactctgaagagagctcaagatgtg
cgcaagcagcttcttggtataatggacaggcacaaattagatgtcgtgtcagccggtaaa
aacacagttcgaattcaaaaagcagtatgctccggattctttcgaaatgcagccaagaag
gatccacaagaaggttatagaactcttgtagacagtcaagttgtctatattcaccctagc
agtgctctgtttaacaggcagcctgaatgggtaatttatcacgaattggtccaaacgaca
aaggagtacatgcgagaggtcaccacgattgatcctaaatggctggtggaatttgcacca
gcattctttaaattcagtgatccaacaaaattgagtaaatttaagaaaaatcaaagactg
gaacctctatacaacaaatacgaagaaccaaactcgtggagaatatcccgggtgcggcga
agacgaaattaa
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integrated database retrieval system
