KEGG   Cephus cinctus (wheat stem sawfly): 107266687
Entry
107266687         CDS       T07523                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 5
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
ccin  Cephus cinctus (wheat stem sawfly)
Pathway
ccin03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ccin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    107266687
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ccin03021]
    107266687
   03036 Chromosome and associated proteins [BR:ccin03036]
    107266687
Transcription machinery [BR:ccin03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     107266687
   Coactivators
    SAGA/TFTC/STAGA complex
     107266687
Chromosome and associated proteins [BR:ccin03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     107266687
    STAGA complex
     107266687
    TFTC complex
     107266687
    SAGA complex
     107266687
    SLIK complex
     107266687
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40_CDC20-Fz TFIID_NTD2 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 EIF3I Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_Aladin NBCH_WD40 Beta-prop_TEP1_C Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_WDR41 Beta-prop_VPS8 WD40_RFWD3 Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_WDR19_1st Beta-prop_HPS5 Tricorn_2nd Beta-prop_SPT8 PEP5_VPS11_N WD40_like DUF5713 DUF7165 Cytochrom_D1 Beta-prop_NWD2_C Beta-prop_NUP159_NUP214
Other DBs
NCBI-GeneID: 107266687
NCBI-ProteinID: XP_015592917
UniProt: A0AAJ7FI42
LinkDB
Position
Unknown
AA seq 652 aa
MDGDKNTLLAVLQLLRKYNLKSTEDLFRKEANLTDITADDNQQTESEVNSVLSAYKSEGD
PALYEKAYSELKKFVEGSLDIYKHELGTILYPVLVHMYLELVYNNHSVEAKQLMEKFCGN
LEEYYQEDLKKLSNVTKREQMAGNELTDTFKSNQFIIRMSRDTLSILKRHLQEKKHSVLL
NIIQEHLYFDMYEGVARNKQQIEATSGAIVGEATRQDNKAKVYYGLLKEPDIQCIPPAEE
EEDDTAGTEGDKPKKKKAKKDPLFSKKTKSDPNAPPVGRMPLPNLKDADKLEKLKALREA
SKRVVLGPDSLPSICFYTLLNAVHGVTAAEIAEDSSLLAVGFSDSAIKVWSLVPQKLRLM
KTGDQLQDINKEAEDVLVRMMDDRTAETVRSLYGHSGPIYSLSFSPDRNLLLSSSEDATV
RLWSLHTWTCVVCYKGHLYPVWSVRFSPHGYYFATASHDKTARLWATDSHQPLRIFAGHY
SDVDVVQFHPNSNYVATGSSDMTVRLWDCVTGSQVRLMTGHKGPIYSLAFSAEGRFLASA
GADHRILVWDLAHGHLVAALSSHSANVHCLSFSRDGNILVSGSLDCTLKLWDFTKLAEEM
TLEDVNVSHNPDVKTCVETYLLRTFATKNSPVLTLHFSRRNLLLGVGMFEAS
NT seq 1959 nt   +upstreamnt  +downstreamnt
atggacggagataagaacactcttcttgctgtattgcagttgttgcggaaatataattta
aagagcacagaggacttgtttaggaaagaagcaaatttaacagatataactgcagatgac
aatcagcaaacagaatcagaagtaaatagtgtactatctgcgtacaagagtgaaggggat
ccagcactttatgagaaagcttatagtgaattaaagaaatttgttgagggttctttggat
atttataagcatgaacttggtacaatattatatcctgtattggtacatatgtatctggaa
cttgtatataacaatcattccgtggaagcaaagcaacttatggagaagttttgtggtaac
ttggaagagtattaccaagaagatttgaaaaaactgtctaatgtaacaaaacgagagcaa
atggcaggaaatgaattgacagacacatttaaatccaatcagtttataatcagaatgtcg
cgggatactctttctatactgaagagacacttacaagaaaagaaacacagtgtactttta
aatatcatacaagaacatctttactttgatatgtatgaaggtgttgcacgtaacaagcaa
caaattgaagccacatcaggtgctattgttggagaagctacaagacaagataataaggca
aaggtttactatggtcttttgaaggagccagacatacaatgtataccaccagcagaagaa
gaagaggacgataccgctgggactgaaggtgacaaaccaaagaaaaagaaagcaaagaaa
gatccacttttttcaaagaaaacaaaatcagatccaaatgcaccaccagtaggaagaatg
cctttgccaaatcttaaagatgctgataaattagagaaattgaaggcattgagagaagca
tcgaaaagagttgtcctgggaccagatagtttgccttctatatgtttttataccttgttg
aacgctgtccacggtgtaacagcagcggaaatcgcagaagattctagtttgttagctgtt
ggattcagcgattcagcaattaaagtctggagtttagttcctcaaaagttaaggctcatg
aagacgggtgatcaactgcaagatatcaataaagaagcagaagacgtgttagtacgaatg
atggatgacaggactgcagaaacagtaagatcattgtatggccatagtggacccatatac
agcttatcttttagtccagatagaaatcttttactctcatcttcagaagatgcaacagtg
agattgtggtcgcttcatacgtggacttgtgttgtttgctacaagggtcatttatatcct
gtatggtcagtacgattttcaccccatggatattactttgctactgcatcccatgacaaa
actgcaagactttgggctacggattcacatcaaccattacgtatatttgctggtcactat
tcggacgtcgatgtagtacagtttcatccaaactcaaactacgtagcaactggttcaagt
gacatgactgtcagattatgggactgtgtgacaggtagccaagtacggcttatgactgga
cacaaaggtccaatttattcattggcattctcagctgaaggaagattcctagcatcagca
ggggctgatcatcgaatccttgtctgggatttagcacatgggcatcttgtagcagcatta
tcaagtcatagtgctaatgtgcattgtttatcatttagcagagatggtaacattttagta
tcaggatcccttgactgtactcttaaactgtgggactttacgaaacttgcggaagaaatg
acactagaagatgtaaacgtatctcataatcctgatgtgaaaacatgtgtagaaacatac
ttgctccgtacctttgctacaaagaattcaccagttctgacccttcatttttcgcgaaga
aaccttcttctaggagtaggaatgttcgaggcttcataa

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