Cephus cinctus (wheat stem sawfly): 107266716
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Entry
107266716 CDS
T07523
Name
(RefSeq) probable ATP-dependent RNA helicase DDX55 homolog
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
ccin
Cephus cinctus (wheat stem sawfly)
Brite
KEGG Orthology (KO) [BR:
ccin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccin03009
]
107266716
Enzymes [BR:
ccin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107266716
Ribosome biogenesis [BR:
ccin03009
]
Eukaryotic type
Pre-60S particles
Helicases
107266716
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
CTT_SPB4
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
107266716
NCBI-ProteinID:
XP_015592965
UniProt:
A0AAJ7FI51
LinkDB
All DBs
Position
Unknown
AA seq
584 aa
AA seq
DB search
MKSKKWEELDIPLSDAVLKTVKQLNFSSMTPIQAACIPILLQGKDVAAEAVTGSGKTLAF
LIPMLELLQKREEKWKKMEIGGIIISPTRELATQINEVLAQFLERISSLKQILLVGGTTV
DEDIAKLREGCNIIVATPGRLEDILSNCKDVNLAASVKSLELLVLDEADRLLDLGFSVTL
NTILSFLPRLRRTGLFSATQTKQLQQLIRAGLRNPVLVTIKEKSSVSTPLNLINNYAITN
AETKLAQMLEFIKIKGINLKYMIFFSTCACVDYFSYVIKAILPYSNVFALHGKMKNKRYK
VFEQFRATESGLLLCTDVMARGIDIPEVDWVLQYDPPSTASSFVHRCGRTARIGNEGNAL
LLLLESEDAYIEFIKRNQKVELSMIQLKEPSLVEKCLKTMRNLQKKDRVLFDKANRAFVS
YIQAYNKHECNLILRLKDLDLGKVAMGFGLLKMPKMPELKGRDVSSFQDPQIDINTLAYK
DKQQELVRQEKLNTYRETGIWPGKHKRKQKQTEAWSEAKQKKVEKKEKRNKRKEKKALAG
PVKKKRKKTSKEDLAELAKDIALIKKFKRKKISQQEFDEAFGVK
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtaaaaagtgggaggaattggatattcctctaagcgatgctgttttaaaaaca
gttaaacaattgaatttttcatccatgacaccaattcaggctgcatgtataccaatttta
ttacaaggaaaagatgtagctgcagaagctgttacaggcagtgggaagacactagcgttc
cttattccaatgttagaattgcttcagaaaagagaggaaaaatggaagaaaatggaaatc
ggtggaatcataatttctcctactcgtgaattagccacacagataaacgaagttttagca
caatttcttgaaagaatttcaagtttaaagcaaatacttcttgtcggtggtactacagtt
gacgaggatattgcaaaacttcgagaaggctgcaatattattgtagccacccctggtaga
ttggaagacatattatctaattgcaaggatgttaacttagctgctagtgtgaagtccttg
gaacttctagtgctggatgaagctgatagacttcttgatctaggattttcagtaacccta
aacacaattttaagtttcctaccaagattgcgcagaaccggattattctcagcaacacaa
actaaacaattgcaacagcttatcagagctggcttaaggaacccagtattagtgacaatc
aaagaaaaatcaagtgtatcaactccattgaatctgatcaataactatgccataacaaat
gctgaaactaaacttgctcaaatgcttgaattcataaagataaaaggaataaatttaaag
tacatgatattcttctccacttgtgcatgcgttgactatttcagttatgtcatcaaagcg
atattaccatactcaaacgtatttgcgttacatggaaaaatgaagaataaacgatacaag
gtatttgaacagttccgtgctacggaaagtggtcttctcttatgcacagatgtaatggct
cgtggtattgatatacctgaagtggattgggtactgcaatacgatcccccttcgacagct
agtagtttcgttcatagatgtggaaggactgccagaattggcaatgaaggcaatgctcta
ttattgctactagaatccgaagacgcatatattgaattcatcaagaggaatcaaaaagta
gaattatcaatgatacaattgaaggaaccttctttagtcgaaaagtgtttaaaaacaatg
aggaatcttcaaaaaaaggatcgagtccttttcgataaagcaaatagggcttttgtatca
tacatacaagcatataataaacacgaatgcaatctaatactgaggctgaaggatctcgat
ttaggaaaagtagcaatgggttttggtttattaaaaatgccaaaaatgccagaactgaaa
ggacgagatgtctcgtcttttcaggatcctcagatagatattaacactctggcctacaag
gacaaacaacaagaattagttagacaagaaaagttaaatacttacagagaaaccggtatt
tggcccggtaagcacaaacgtaaacagaaacagacagaagcttggtctgaggctaagcag
aaaaaagtagaaaaaaaagaaaaacgtaataaaaggaaagaaaaaaaggctttggctggt
cctgtgaagaagaaacgaaaaaagactagcaaggaggatctggcagaattagcaaaagac
atagctttgataaagaaattcaaaaggaaaaagatttctcaacaagagtttgatgaagcc
tttggtgtcaaataa
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