Cephus cinctus (wheat stem sawfly): 107267399
Help
Entry
107267399 CDS
T07523
Name
(RefSeq) probable helicase senataxin isoform X1
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
ccin
Cephus cinctus (wheat stem sawfly)
Brite
KEGG Orthology (KO) [BR:
ccin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccin03021
]
107267399
Enzymes [BR:
ccin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
107267399
5.6.2.5 RNA 5'-3' helicase
107267399
Transcription machinery [BR:
ccin03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
107267399
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
FHA
UvrD-helicase
AAA_19
AAA_30
Yop-YscD_cpl
UvrD_C_2
Viral_helicase1
SLFN-g3_helicase
ResIII
AAA_16
PIF1
AAA_22
AAA_29
Motif
Other DBs
NCBI-GeneID:
107267399
NCBI-ProteinID:
XP_024940516
UniProt:
A0AAJ7RHJ3
LinkDB
All DBs
Position
Unknown
AA seq
1908 aa
AA seq
DB search
MESHETGVEFILERVNGSDTIVLDEHVQTYTCGRGKRNQIVCLSLWVSREHCLFIRNQNT
LNVVDLSSSNGVFVNGERIPAKQMMTLKEDDIIGIGSPTIDPTDITMFVYVLRVSRPKLS
SMENSSDTLTRTVLNTNNSSVLNSDDVASEKKQRRRSFLENSSLYLPRKIAKMNSSELCG
DAIQRVLDESEIDVKIEIRPITPVLLSSTKEENNIDVHLSIHSLTNSIHEPNNDNQKENL
PTPILMECEEKNISMTTELSNGMKDCIDVNTSLENLSNFSAPEIKEIPQTIHSPLTKNNY
PTKYCFNIDKKKLISNKTLCKNETEPTKVKDITNSNLINIQKNSSTINKRSSNGGCISMQ
KSTTASEHNDSFENDIIVLDDTEDEELHTNKSSHNVTTTTNVQAIYNNGPCSSKNSSSTL
GKSIKASNIHSSTIASNNLLRDNQMEILPNEKSTIAEPSASSNGITNIEVTPIKMEIEFQ
RLNNDYHTPVTSPSKNSPEIFVTSPIKVRQLKHEQTTTFSMSDVVNLTDDEEDIFPSSQL
FDTTTDVQLPIKEEVKGEVDELFQTPYDTDSIILLSDSEDEDNPWLQRLSRSQVLLEVDE
PALKPAETKKRLSDLQITEILDSKDQEGQPKKKTHNDENKKNKINKAKHKSHSKKHRKKD
AMEVDAAVPDDIVPPETSENKNLDHKKHRTHEKRLSDKLIRKEVRAGESPQSSNKDKSSG
CKDTHPQDDLCYDNILTIGTKTNLSTTEKLKSTPLKLSSLDKKPPEIIAPPNLPKGEGKG
FSCNVQRSTTSSSVTVAATTSTVAENTLNTTEINTVAKTTSQVKLSTKEKKELLIQKKLE
KANYMKEQKHRRDKYKWADCLPVSNNKKSLSLSKAEKLEIINDRKAKLKKLADEKKADAK
DSKPKRHIINKPKAKISQKTRGDFLIQPQDADRESRGTDITSSCPTNIASESSTSTDKRT
SSTVEETHVEKNLPAKLASEKSLRKDSDNPSRSSVPGDIANVALNLRDSLTLSKCPTTDI
KKAHKQKVSHESSPSATTSTKSISITDRTKNLADTRNRKTKDCSETIQKENCSPNAKSST
VKNKNKKSVHFSTELVQVKYYEIESFNTLNKVVGKDAPIPQKKLAVKTNNNATQPCPKLE
EFLLQIFMWNPVWLEEQKRFKIDPPVTGTKELIPLLTSYKSFDEYYRIIMPLLLLEIWHG
ITKEFEVIDKNPKRPTVICSIVSNSASSYQIPSSKLSLTNMMLEVLATKEDIHKQAHPIY
GDLVFFELGYTDKGKHRFHKVFAYVTNVYQTVLTPQTYYNRDLVNYVKNPYALLTYTVMT
KPLEVNVHANRAQRLRSITYLRSDIRMIQALQYLPSSPLLSAILKPKANDMSHSTVLSKL
KNYPLVTKEKLNHKQLEAVIKVTDAIVQKEAKICLIQGPPGTGKSKVIVNIITQVLYGDN
RYKNNRAPLRILVCAPSNAAIDEIVLRLLTVRAKFKQDRFKMVRVGRIETMHPTVKEISV
PELARRDIKKIASTYSSSAYSMDSVEEEKRSLEAKANALRSKLTSSQNQDENHLKYLKMK
LNGITTKLDMLKCRKPVNEMDRTTLAKLQRDAETTILSGADIITCTLSSCYTNQMESIFG
GNKERISVCIVDEATQSNEPQTLIPLMLGVNTLVLVGDPNQLPATVLSQQAKKFGLDQSL
FSRIQNALEDTANNPVIMLDTQYRMAYPIAYWPNKFFYGGNLKNAIDRPIAFPFQSYRVL
NLDSNQNNDKFSNTREADFVSNMIFVMLTNSKLIKWESPISIGIITPYNSQKFLIQTKVN
ERISEIPESTKKKVNIEINTVDSFQGQERDVIIMSCVRSNGIGFMSDAQRLCVAMTRAKH
SLILCGNFATFQRDQMWCALLSDARSRGVFIHIRANASFDEIMTHVVA
NT seq
5727 nt
NT seq
+upstream
nt +downstream
nt
atggagagtcatgaaacaggtgttgaatttatattggagagagttaatgggtcggataca
attgttcttgatgaacacgtgcaaacttacacgtgtggcagaggcaagcgaaatcaaatt
gtttgcctcagcctttgggtatcccgtgaacattgtctgtttattcgaaatcaaaataca
ttgaatgtagttgatttatcaagctctaatggtgtctttgtcaatggggagagaatacct
gcaaagcagatgatgacgttaaaggaagatgatattattggtattggttctccaactatt
gatccgacagatataacgatgtttgtctatgtactccgtgtatcaagacccaaactctca
tccatggagaacagttcagatactctaacaagaactgtcttgaacaccaataatagtagc
gtactaaattcagatgatgtagcttctgaaaagaaacaaagacgaagatccttcctggaa
aacagcagtttatatttaccacgtaaaatagcaaaaatgaactcttcggaattatgtggt
gacgctattcaacgtgtattggatgaatcagaaattgatgtaaaaattgaaatacgacca
atcactccagtattgctgtcaagtactaaagaagagaacaatattgatgtccatctatca
attcattctcttacgaacagtattcatgaaccgaacaatgataatcaaaaagaaaacctg
ccaactcctatattaatggagtgtgaggagaagaatatttcaatgactactgaactatca
aatggtatgaaggattgtatagatgtaaatacatcgttggaaaatctatctaatttttca
gcaccagaaatcaaggaaatacctcaaacaatccatagtccattgactaaaaataactat
ccaacaaaatattgctttaatattgataaaaaaaaattaataagtaataaaacattatgc
aaaaatgagacagaaccaaccaaggtaaaagatatcactaattcaaatctcataaatata
caaaagaattcctctacgattaataaacgttcatccaatggtggttgtatatcaatgcaa
aaatcgacaactgcatcagaacacaatgacagttttgaaaatgatataattgtgttggac
gacactgaagatgaagaattgcatacaaacaaaagttctcataatgttacaactacgaca
aacgtacaagccatatacaacaatggtccatgttcttctaaaaattcttcatcaacacta
ggaaaatctataaaagccagcaatattcattcatctaccattgcatcaaataatttatta
cgcgataatcaaatggaaatattgcccaacgaaaaatcaacaattgctgaaccatcagct
tcctctaatggtatcacgaatatagaggtcacgcctattaaaatggaaatagaatttcaa
cgattaaataatgactatcacacgccagtcacatccccttcaaaaaatagtccagagatt
ttcgtcacatcacctattaaagtccgacaactaaagcatgaacaaactacaacattctca
atgtctgacgtcgtgaacctgaccgacgacgaagaggacatatttccatcttctcaattg
tttgatacaactactgatgtgcagttaccaattaaagaagaggtcaaaggggaagttgac
gaattattccagacaccttacgatactgattctataatcttattatcagacagcgaagat
gaggataatccttggctccagagactctcaagaagtcaagtacttctcgaagtagatgaa
ccagcccttaaacctgctgaaaccaagaaaagacttagtgatctccaaatcactgagata
ttggacagcaaagatcaagaaggacaaccaaagaagaaaactcataatgatgagaataag
aaaaataaaatcaataaagctaagcataaatcgcattcaaagaaacaccgaaagaaagac
gctatggaagtggatgctgctgtacctgatgatatagttccaccggaaacatccgagaat
aaaaatcttgatcataagaagcacaggacacatgaaaagagattatcagataaattgatt
agaaaggaagtaagggcaggtgaatctccgcagtcttccaacaaggacaaaagttcagga
tgtaaagatactcatcctcaggatgacctttgttatgataatatcctaacaattggaacc
aaaacgaacttaagtaccacggagaaattgaaatcaactccattaaaattaagttcactt
gacaagaagccacccgaaatcattgcaccacctaatttacctaaaggcgaaggaaaaggt
tttagttgcaatgtacagagaagtacaacttcatcaagtgtaacagttgcagcgacaaca
tcaacagttgctgaaaatactttgaatacaacagaaattaatactgtcgctaagacaaca
tcacaagttaaactgtcgaccaaggaaaagaaggaattattgattcagaagaaacttgaa
aaggcaaattatatgaaggaacagaaacatcgtagagataaatacaaatgggctgattgt
cttccagtgagcaataacaaaaaatcgctgtcactttcaaaggctgaaaaattagaaatt
attaatgatagaaaggcaaagctaaagaaattagcggacgagaagaaagctgacgcgaag
gactctaagcctaagcgacatattattaacaaaccaaaagcaaagatatcgcaaaaaacc
cgtggcgactttctgatacaaccacaagatgctgatagggaatccaggggtactgatata
acgagttcttgtcctacaaatattgctagtgaatcatctacgagcactgataagcgcacg
agtagtacagtagaagaaacacatgttgaaaaaaatttaccagctaaattagcctctgaa
aaatcactacgaaaagattcagataatccatcaagatcatctgttcctggtgacatagcc
aatgtagcattaaatcttcgtgactcactgactctttccaagtgtccaactacagatatt
aaaaaagctcataaacaaaaagtctctcatgaatcatctccaagtgcaactacctcaaca
aagtctatatctataacagatagaacgaaaaatctagcagatactagaaatagaaaaact
aaagactgttcggaaaccatacagaaggaaaattgttcaccaaatgcaaaaagttcaact
gtaaagaataagaataagaagagcgtccattttagtacagaactagtgcaagtaaagtat
tatgaaattgagtcatttaatactttgaataaggtggtaggaaaagatgctccgatacct
caaaaaaaattagccgttaaaacgaacaacaatgccactcaaccctgtccaaaactggag
gaatttttactacagattttcatgtggaatccagtgtggcttgaggaacaaaagcgtttc
aagattgatccaccagtaacgggcaccaaagaattaattcctttattaacgtcatacaaa
tcgtttgatgaatattaccgaatcattatgcctctcttattactagaaatatggcatggt
atcacaaaggaatttgaagttatcgataaaaatccaaaacgtccaacagtgatatgttct
atagtaagcaattcagcatcgagttaccaaattccatcatcaaaattatccttaacaaat
atgatgcttgaagtacttgctacgaaagaggatatacataaacaagcgcaccctatttat
ggggatttagtattctttgaattaggttatacagataagggaaagcatagatttcataaa
gtttttgcatacgtaacaaatgtttatcaaactgttttgacaccacagacgtattacaat
cgagatctggtcaactacgtgaagaatccatatgctcttctcacttatacagtaatgaca
aaaccactggaagtgaatgttcatgcaaatcgtgctcaaaggttacgtagcatcacttat
ttaagatctgacataagaatgatacaggcattacagtatcttccttcttcgccattactc
agtgcaatattaaagccaaaggcaaatgacatgagccattcaacagttctatcaaaattg
aagaactatccgttggttactaaagaaaaactcaatcacaagcaactagaagctgtgatt
aaagtaacagatgcaatagtgcaaaaggaagcaaaaatatgtctgatccaaggaccccca
ggtacggggaagtcaaaggtcattgtaaatattataacccaagtgctgtatggtgataat
agatacaagaacaacagagctcctctcaggattttagtctgtgctccatccaatgccgcc
attgatgaaattgttctgcgtctcttgactgttcgagctaaatttaaacaagatcgtttt
aaaatggtgagagttggtcgtatagaaactatgcatccaactgttaaagaaatttctgta
ccggaacttgctaggcgagacataaagaaaatagcttctacttactcatcaagcgcatat
tcaatggatagcgtagaggaagagaaacgaagtctggaagcaaaggcaaatgcattgcgc
agcaagttgacgagttctcagaatcaggatgagaatcacctaaaatacctaaaaatgaag
cttaatggtattacaacaaaattagacatgctcaagtgccgaaagcctgtgaatgaaatg
gaccgtacaactttagcaaagctacaacgggatgctgagacaacgatcttgtctggagcc
gacataataacgtgtaccttgtcctcttgttacacaaatcaaatggaatcgatatttggt
ggtaacaaagaaagaatatctgtatgtattgtggatgaagctacccaatctaatgaacca
caaacgcttataccattgatgttaggagtgaacacgctagtcctcgtgggtgatccaaat
caattaccagcaacggtattatctcagcaagcaaaaaagtttggcttggaccaatctctc
ttctcgcgaatacaaaatgctctggaggatacagctaacaatcccgtaattatgctcgat
acacagtacagaatggcctaccctattgcgtattggccaaacaaattcttttatggagga
aatttgaaaaatgctattgacagaccaatagcctttcctttccaatcgtacagagtatta
aaccttgattctaatcaaaataatgataaattctcgaatacaagagaagctgactttgtt
tcaaacatgatttttgttatgctcacgaattcaaagttaattaaatgggagtcgcctata
tcgataggcattatcacaccttacaacagccagaagtttctgattcaaacaaaagtaaat
gagaggatatctgagataccagagagcacgaagaagaaggttaatatcgaaataaatact
gttgacagttttcaaggccaagaacgtgacgtgataattatgtcttgcgtaagaagcaat
ggtattggatttatgtcagatgctcaaagattgtgcgttgccatgaccagagccaagcac
agccttatactatgtggtaactttgccacgtttcagagggatcaaatgtggtgtgctctg
ctgtcagatgccagatcacgtggtgttttcatacacatacgtgccaatgcgtctttcgat
gaaattatgacgcacgttgtagcgtaa
DBGET
integrated database retrieval system
