Cephus cinctus (wheat stem sawfly): 107267588
Help
Entry
107267588 CDS
T07523
Name
(RefSeq) trithorax group protein osa isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
ccin
Cephus cinctus (wheat stem sawfly)
Pathway
ccin03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ccin00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107267588
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccin03000
]
107267588
03021 Transcription machinery [BR:
ccin03021
]
107267588
03036 Chromosome and associated proteins [BR:
ccin03036
]
107267588
Transcription factors [BR:
ccin03000
]
Eukaryotic type
Helix-turn-helix
ARID
107267588
Transcription machinery [BR:
ccin03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107267588
Chromosome and associated proteins [BR:
ccin03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
107267588
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
107267588
NCBI-ProteinID:
XP_015594991
UniProt:
A0AAJ7BW17
LinkDB
All DBs
Position
Unknown
AA seq
2141 aa
AA seq
DB search
MAATQAESQQNDVKLNEAVKCAQKRPQVGGNSASASGNQQLDLESGEKASRGAAQLLKYV
NRGGDSSFEMSQYREDIGGHPAGEVKSPRELPQTPQETPAKPEPLALDASGHPAHPGHPF
ASSVARDYSEEYVNKPSEFTPKQLSDYPGKQPADYGGKPGEFLGKQLDYSSKQSTNEADR
GHQADMDEHYAVSKIEPRLAHIGPGPGSFPGQPRFLSGQSISQATGPTPTLNQLLQASTP
VHRFHANYPGIGPESYQQPWPIQRPPVVPPVYPQTSQRPPQTGSPRLHPGPGGPSSPTAM
PYPQFTQRFSSPTRPHSPYSHHQLNSYGVQTGHAPSIYPEQRSWNQGGPANPPPPPPTNQ
ANPASQSPQRALSQSPAPPPSASPQPQPSGQPQSFHNIQQRSTTPNTQGIDSGELSGQNS
NDSSNGPAGPGTPNSQGMRPTPSPTGSTGSRSMSPAVGQQNVQMPPRPSSSQSDGSGPAR
MSHSPMTTQGGYQQPLGPSPHMHGYKVNSSGPAVVQPGPGPAGLGGIGPMGSGMGYASTG
GGAGQQGGYPGQGAYPPPRPHMQFPQGYPPPTNSQPPPNNQYQPARPNNMAQYPPYPHKM
GFNNVPSGMPPSPGPPQVYGTGGGPGMVPPGTSGLSAIGNMGPPASSMGPPPPSPNHVSS
QPPATSSAVPHPHPPAATPPLNHEGSPMPPPSTTPNSHPTPAPTPTSHSSAELSTETSND
SGITTTASGTSAINVTSTSSGTVTSVITTGPDGTSLDEGSQQSTLSNASAASGEDPALTP
KARKEMIGTYHSHPATPQSTVPSPGAASINSIHEEYPDMSSPGWPRTPASPVFNSHVPQD
PYRSKKPDSLAKLYEMDDSMERRSWLDKLVAFMEERRTPITSCPTISKNPLDLFRLYLYV
KERGGFMEVCKVTKNKTWKDIAGLLGIGASSSAAYTLRKHYTKHLLAYECHFDRGGVDPQ
PIINQVEASSKKKNSKSTASVPSPGSSNSQDSFPAAGSSSTSMDGYGSYQSNYTSNAPGG
SSAEYTPPPRPPSQSSAPSPHQGMQQGAYQGGGSYQNYPQDYIRPQGNTMTQQGDFNQPY
SPRSHYPQYSPDAERAYAGGNMPPNNTAGQEMYNRYAGGQQPSGYSTATPPSARNNNYIS
GPQGHPPNAQPPSTSQPSSPSQSPATPTYSCPQDYYRQEQAAYGTPGGNQMYSGGATANK
NMPPPPPGPTQPRRHPDFAKDQQYPPYNQQRPTYPGWTSTTNQYSSPTASNRVPYPSQQS
QQQSQQQQQPPQVATAGSPSTGVGGITGGQQWSSQQPPRPSSQPNINAITHAPPPPWDHR
YPNQPSPLYPPPSSHQSQLGMNPMIGQQPTPKREMTFPSDSVEAITPLLYKRRKLTRADV
APVEAWRIMMALRSGLLAESCWALDVLNILLFDDTSVSYFGLAHLPGLLDVLLEHFSRSL
SDMFDFAAVDDERYWCQTSEGPDVDLGAVTRPIDAEDRAKLLSTSNYTFLSRRGRPVKVV
PRDDDLFVLDSRRPWDHQDCEADTEPWQVDSNSTKYIVTSFQSEVSTLPFARHLRDEKPP
LLQKEVESVDTKEESKVDGTSTLHDNLDSTKKSDESSDKLKDCGERKQADKKKKTKTLSD
VLSRIKKEPMEMNDLTRELFEKKNDVPRKECESEAKANNNMGEHFSGISKTDEDSFPNHN
GISDSLSTAELEKREIKREIEESEEAEEVGVRDGTDARDEARDEKEASEGPRLKIRDPAG
TLKRRRINDYEDESYSRDEASLYLVTESQDSLARRCVCLSTILRNLTFIPGNEIEFAKNV
TFLSLLGKLLLLHHEHPVRTQKTRNYDREEDADFADSCSSLQGESEWWWDFLHHIRENVL
VMAANIAGHMDLSQHPEEISRPVLDGLLHWAVCPAAHGQDPFPTVSPNSSLSPQRLALEA
LCKLCVTESNVDLVVATPPYSRLQRLCSVLTRLLCRSEEQVLREFGVNLLHFLSAADSGV
ARTIALQTPCVALLVAFIEQAESSALGVANQHGLAALRDNPESMGTSLDMLRRAAGTLLN
LARHPDNRTLLLQHESRLLALVMSQILDQQVAAIVARVLFQCSRGGVGGAGSNGVNSNNS
SSSNSNNTNNVISNVTTTILTTIITNTTTVTTTTTTTTTTS
NT seq
6426 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgacgcaagccgagagccaacaaaacgatgtgaagctgaacgaggccgtgaaa
tgcgcgcagaaacgtccgcaagtcggtggaaatagtgcgagtgccagtggaaaccaacaa
ttagatttagaatcgggcgagaaagcgtcccggggcgcggcccagctgcttaagtatgtg
aatcgcggcggggactcgagtttcgagatgagtcaataccgtgaagacattggcggacac
cccgccggcgaggtcaagtcaccccgtgagctcccccaaaccccgcaggagacacctgct
aaacctgaacctcttgcccttgatgcctctgggcacccagcccaccctggacatccgttc
gcttcgagcgtagcgcgcgactactctgaggagtacgtcaacaaacctagcgagtttacc
cccaagcagttaagtgactatccgggtaaacagccagcagactacggagggaaacccggc
gagtttctaggaaagcagctcgattattccagtaagcagtcgacaaacgaagcggacagg
ggacatcaggcagacatggatgagcattatgctgtatcaaaaattgaaccacgccttgct
catattgggcctggacctgggtcttttcctggtcaaccaaggtttctatctggccagagt
atatcacaggccactggtccaacacctacccttaatcagctgcttcaggcctccacgcct
gtgcatcgttttcatgccaattaccctggtatcggacctgaatcgtaccaacagccttgg
cctatacaacgtcctccagttgtgccacctgtttatccacaaacaagtcagcgtcctcca
caaactggttcaccaaggttacatcctgggccaggaggtccaagttctccaactgctatg
ccatacccccaatttacccaacgattttcatcacctacaagaccacattcaccatatagt
catcatcagttgaattcatatggggtgcaaactggacatgctccaagcatatatccagag
caaagaagttggaatcaaggaggaccagcaaatccacctccacctcctccaacgaatcag
gcaaatcctgcaagtcaatcaccacaacgtgcactctctcaatctcccgcaccaccgcct
tcagcttcacctcaaccacaaccttctggccaacctcagagtttccacaatatacagcaa
cgatccacaactccaaatactcaggggatcgactctggggaactatcaggccaaaacagc
aacgacagttctaatggaccagctggtcctgggactccaaattcccaggggatgagacca
accccttcacctacaggatcaactggttctcgctccatgtcccctgctgttggtcaacaa
aacgttcaaatgcctccacgcccttcaagtagccagtcagatggtagtggaccagcacgc
atgagtcactcgccaatgacaacacaaggaggatatcaacaacctttaggtccttcacca
cacatgcacggctacaaagtaaacagcagtggtccagctgtagttcagccgggaccgggg
ccggcaggcctcggtggtattggtccaatgggtagcggcatgggctatgcatctaccggg
ggaggtgcaggccaacaaggaggttatccaggacagggtgcttatccaccacctcgtccg
catatgcagtttcctcaaggttatccaccgcctacaaactctcagccgccacctaacaac
caataccagcctgcgagacctaataatatggcgcaatatcctccctatccgcataaaatg
gggttcaataacgtaccttcgggaatgccacctagtccgggaccgcctcaggtatatggt
actggcgggggtccgggtatggtaccaccaggtacctcaggattaagtgctattggtaac
atgggaccaccagcgagttcgatgggtccgcccccgccatcaccaaatcacgtaagcagt
cagcctccggcaacgagttccgccgtgccacatccgcatcctccagcagctacgccaccc
ctcaatcacgagggtagtcctatgccaccgccgagcactacgccgaattcgcatccgacg
cctgcacctactcctaccagccatagttccgcggagcttagtactgaaacttcaaacgac
agcggcatcactaccacagcttcaggtacctcagctatcaatgttacgtcaacatcgagt
ggtactgtaacgtccgtgataacaactggaccggatggcacttctttggacgaaggctca
cagcagtcaactttgtcgaatgcatctgcagcatctggagaagacccagcgttaactcca
aaagccaggaaagagatgattggaacgtatcatagtcatcctgctacaccacagagtacg
gttccgtcacctggtgctgcgagcatcaactcgatacatgaagagtatcctgatatgagt
agtccaggctggcctcgaacacctgctagtcccgtgtttaacagtcatgtgcctcaagac
ccgtacagatctaagaaacctgacagtttggcgaaactctacgaaatggatgactccatg
gaacgaagatcgtggctggacaagcttgttgctttcatggaggaacgaaggactccgatt
acgagttgtcctaccatctccaagaaccccctcgacttgtttcgcctatatctctacgta
aaagagagagggggcttcatggaggtatgcaaggtgaccaaaaacaaaacctggaaggac
atagccggtctacttggtattggtgcaagtagcagtgcagcttacacgttacgcaagcac
tacacgaagcacttgctggcatacgagtgccattttgatcgtggaggcgttgatccacag
cctattataaatcaggttgaagctagttctaagaagaagaattcaaagagtactgcatcc
gtaccgtcaccaggctcctcgaattctcaggactcgtttcctgcggcaggatcgagtagt
acctcgatggatggatatggaagctatcagagtaattatactagtaacgcaccaggtgga
tcttcagcagaatatactcctccaccgagaccgccaagtcagagtagtgcaccttcgccg
catcaaggaatgcagcaaggcgcttatcaaggtggaggttcctaccaaaactatccacaa
gattatattcgtcctcaaggaaacacgatgactcagcaaggagatttcaatcaaccgtac
tcaccgcgttcgcattacccacaatattcgccggatgccgagagagcttatgctggggga
aatatgccgccgaataataccgcaggtcaggaaatgtacaacaggtatgccggcggtcaa
cagccatcaggctactcgaccgctacgccacccagtgcacgcaataacaactatatctct
gggccgcaaggtcatcctccaaacgctcagccaccatcaacgagccaaccatcctctccg
tcacagtcgccggcgactccgacgtactcctgtccgcaagattactatcggcaggaacag
gcggcgtacggaacaccgggagggaatcagatgtactctggaggtgcaacggcgaacaag
aacatgccacctcctccaccaggaccaacgcaaccaagacgccatccagactttgccaaa
gatcagcagtatcctccgtataatcaacaaagaccgacctatccaggctggacaagtacg
acgaaccaatatagcagtcctactgcgagtaatcgagtaccttatccgagtcagcaatcc
cagcagcagtcgcaacaacagcaacaaccgcctcaagttgcaactgcgggttcgccttct
acaggggttggtgggataaccggcggacagcagtggtccagtcaacaaccacctaggcca
tcttcgcaaccaaacataaatgctattacacacgcgccaccaccaccgtgggaccatcgc
tatccgaaccaaccctctccgctctatcctcctcctagctcgcatcagagtcaactagga
atgaatccaatgattggtcaacaacctaccccgaagagagaaatgacattcccttccgac
agcgtggaagcaataacaccgcttctttacaaacggcgtaaattgacacgtgcagatgtg
gcgccggtagaagcttggcgtatcatgatggctttacgctctggtcttcttgctgaaagc
tgttgggcccttgacgttttaaacattctactatttgatgacacttccgtaagttacttt
ggactggcgcatcttcctggtctgttggacgttctgctggaacatttttctcgttccctt
tccgacatgtttgacttcgcggcggtggacgacgaacgttattggtgtcaaacttcagaa
ggtcctgacgttgaccttggcgctgtgacacggcctatagatgccgaagatcgcgctaaa
cttctctctacttcgaattacacgttcctgtcgagacggggtcgtcctgtgaaggtagtg
ccgcgtgacgatgacctcttcgtattggactctcgtagaccctgggatcatcaagactgt
gaagcggatactgaaccgtggcaagtggatagtaactctaccaaatacatagtgacatcc
tttcagtccgaagtgagcacgttaccgttcgcgcgacatctcagagatgagaagcctcct
cttttacaaaaggaagtagagagcgtggacacgaaagaggaatccaaagttgacggtacc
agtacccttcacgataacttggattccacgaagaagtccgatgagtcgagtgacaaattg
aaggattgcggtgaacgcaagcaagctgacaagaagaagaaaacgaaaactctgagtgac
gtgttatccaggatcaagaaggaaccaatggaaatgaatgatcttactagggaattattc
gagaagaagaatgacgtgcccaggaaagaatgcgaaagcgaggctaaggcaaacaataac
atgggtgaacactttagtgggatatcgaaaaccgacgaggattcgttccccaaccataac
gggataagtgactctctgagtacagccgagttggaaaagagggaaatcaagcgagagatt
gaagagagcgaagaggcggaagaagtaggtgtaagggatgggacagacgcgagggatgag
gcgagagatgaaaaggaggcgagtgagggaccaagattgaagattagagatccagctgga
acgctgaaaaggagacggataaacgattacgaggatgaaagttactcgagggatgaggct
agcctttacctcgtcacagagagtcaagacagtttagcacggcgttgcgtttgcctctcg
acgattctcaggaaccttacttttatccctggaaatgaaatagagttcgcgaagaacgta
acgtttctaagtctgttaggaaaattgctccttctacatcatgaacatcccgttaggacg
caaaaaacgcgaaattacgatcgggaggaagatgccgactttgctgattcctgtagtagt
ttacaaggcgagagtgaatggtggtgggactttcttcaccatatcagagaaaatgtgctc
gtgatggcagcgaatatagccggtcacatggatctgagtcaacatccggaagaaatatcg
cggcctgtactggacggtcttctacattgggccgtttgccctgcggcacatggtcaagac
ccgtttccaacggttagcccaaattcttccctttcaccccagagactcgccttggaagcc
ctctgcaagctctgcgtcactgaaagtaatgtcgacctagttgttgccactccgccctac
tctcgactacagaggctgtgctcagtcctaaccaggttgctatgccgtagtgaagagcaa
gtgttgcgcgagtttggcgtgaatctccttcactttctctcagccgccgacagtggtgtc
gcccgcacaattgcccttcaaacaccctgcgttgcccttcttgtggcattcatagagcag
gcggagagcagtgctctcggagtggcgaatcaacatggtctcgcagctcttcgagacaat
ccagaatcgatgggcacaagtctggacatgctacgacgcgcagcaggcactctccttaac
ctggccaggcatcctgacaatagaaccttgttacttcaacacgagtctcgtctactcgcc
ctggtcatgagccaaatcctggatcagcaggttgctgcgatagtggcgcgtgtcctattc
caatgttctcggggaggcgtgggaggtgcgggcagtaatggcgttaacagtaacaacagt
agcagcagcaacagcaacaacactaataatgttattagcaacgtcacgaccactattctc
accaccattatcaccaacaccaccactgtcaccaccacaaccaccaccaccactactacg
tcgtaa
DBGET
integrated database retrieval system
