Cephus cinctus (wheat stem sawfly): 107268144
Help
Entry
107268144 CDS
T07523
Name
(RefSeq) transcriptional regulator ATRX isoform X2
KO
K10779
transcriptional regulator ATRX
Organism
ccin
Cephus cinctus (wheat stem sawfly)
Brite
KEGG Orthology (KO) [BR:
ccin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccin03000
]
107268144
03036 Chromosome and associated proteins [BR:
ccin03036
]
107268144
Transcription factors [BR:
ccin03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
107268144
Chromosome and associated proteins [BR:
ccin03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
107268144
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ADD_ATRX
Motif
Other DBs
NCBI-GeneID:
107268144
NCBI-ProteinID:
XP_015596104
UniProt:
A0AAJ7FKC5
LinkDB
All DBs
Position
Unknown
AA seq
2503 aa
AA seq
DB search
MDNGTRCTLFLHREQPSHRGQHRRESLAAVEVRVAMGLKVSPEESLYRRKHGVKIDNLKN
LWCASCGIQLVLKETAIFSHPLLGTLQCKRCNDLYEGGELVVPKVAEARICYLCKKHKLS
NRILTCSSANCPFTFCKLCIKRNVRNVECKGAKHWQCFLCNCKQLWEVRAICAAVQASLP
KKNRQSKMSWEDSSETESTSNVSGSEIAKREIEHLKKSKQYRKNMLDNGNVRNVGGRFLK
ISVNSRSNKRRTMLERRKRNDGTGDSSSSEVGASIVKPESRDEWEKQTVTRSELMKIMKK
CLVVRLHKETHADLRNRSKSLSNKRCRYAARASSKQERVIPSTSQILSRETTRQNGTSSS
SSSSSSRCTVPARCEDDSNEEIRQNARAIRRTGARPNRSREMSILKSDSEEESEERSQQK
SQMLPVNCRTRDRSRSSAASSSDIEFKKRSISKKKRMHHQPARLLDDINGDYSNRKNDQL
PEHLKRKLEKLVENIPRHQESRLHDIIEEFYKNVMNSCKRSMSLRKTAYTDFRRTQDFTG
LSDVSTTIFHCTNLIDNIKRNFEKDRNTLLRSYDDWSRASGVTNVFNGIDQNASKQQVEV
NRGAEYRDGTNGGRTRDSVSPLLIGKDKKVTSSGAPNRKDNLSVSRHRRTEEEFSECDTE
EIFSENETSKPLEQKAAKDDLNKNFCGKAFEVGRSHHSKGNNTSSETIVAEKMGLLDAAS
ENSDKDSYDVENPTRVADETTKKNPRSDDDVESVIHNNATVSSLSQKVHVSENISGDSSF
VETSEPEDHSYSRILKRKTLVERSIAQERSEVQVSAASSVLAKKVERSTATGRLSESGSS
TGIGMTIGTDRYILNDTEVRDNTDMNSAKSTQPINAVTEKDNVKEMTSGFEEEPEKVGND
TNESGKSPSSTEEKDMRHVGVATEGKKELHEAADCDAEERNKIDDSLNLNLGKNMRKLSG
MKSVMALRKREDRESSDEESTLPDEQGDSEVFARRQLLDSLSENSDEADKLRISEKMFLS
STSSVNRRSGEERSSDVDSTCSTVILADSIKDIGKSKQAVILAKGAATELEGNADSSKDE
ADLDSVERTESTVAAVPLKRKKFENQTDRLSDLHIDDGRAKEILLLSSSGSSDKDTTTVF
SHDSGRTRSTSDTDSSRASVTSQDSLLRSSMLKKRKFKCQNNYWYSNDSRLRQRSFVLIE
RINEKDLEPYTRVLNESRRRLENKEYKRLFDLDSIERRAQDKRSDAEEKDQQEESAVFSK
GLKDGRRRRQLNEEKEDTLLDHLNKVENGQVVSANDHESENYTNKESLGECNVISAKNAE
NRRFGDSDTIARALLLHSSSDSNSEMFELTQNENEHENDVCSSSQNSKTKKSKKKDEEHS
SEDKEERKSKKERSAWRRSKVLRGRLSDSDSKEEDNKWRRSQKILEEKEKQGSEDDSDVA
ERIKLKRKRTKRRLLGSDSDSDSRKFSKSSEDSNDSLQNRNSKKTEDDSEEKTKTEKKRL
RGVSDSASSESIIEKKKRFKRRRIKAMASDSSDSGSMSNSQSSPGKSGRKNIRKLLKDNR
VADNTKQAAKEEEERLKRIAERQKLYNEMYEIRLAGEERVEKLILDFDEETKQELVSVHK
DLVKRLKPHQAQGIKFMWDACFESLARMKLNKGSGCIVAHCMGLGKSFQVVTLAHTLITH
EEIGVKTIMVVCPLSTVLNWVNEFKIWLKDVNEGTDVRIFEMTRLKKNYERMRHLEQWQR
RGGVLIIGYEMFRNLSNGGKRTRKNVKEAILKCMVDPGADLVVCDEGHLLKNEDTALSKA
MRQVKTLRRIVLTGTPLQNNLKEYHCMVQFVKPNLLGTKKEFMNRFVNPITNGQFDDSTA
ADVKLMKKRAHVLHKMLEGSVQRFDYSVLMPFLPPKQEYVIFVKLTDVQIQLYQHYLDNF
ARKHRGAGGSLFADFQALQRIWTHPMVLRWNTEKMEKANEKRLSDSDTEGSLKDFIDDGS
DSESSQSPSDSSDVQVIRDSGDEKREPRGNPIAEPEAKEDANADSSDWWCQFVKPEHFDD
MRVSTKLSLLFGILKESEQIGDKVLVFSQSLFSLTLIEHFLRMIDDETQLGNNLDRLEGH
TGNWSLGSDYFRLDGQTSPENRNNWCRRFNQSSNTRARLFLISTRAGGLGINLTAANRVI
IFDASWNPSHDVQSIFRIYRFGQKKPCYVYRFLAYGTMEEKIYNRQVTKLSLSCRVVDEQ
QIERHYSNNDLAELYKFEPHGDKDKPTLNLPKDRLLADIFLKCKDSVENYHEHDSLLENK
AEEELDEEERKQAWLEYEEEKKGKPPVSLASLNHQSNYYFQHQFNASQMGDYSNPLDQNK
MMMRLDYENLQQLIRKDYPNLTEEQQKTITNRTILDMYNYLEKQAVHQLPANPMNMGYPT
LDTVPRMGNMQGAIQQQMMYQQQMHQQRRQLLQHGNQQMNYAQQGNVGQLPRPEDVPGTS
SSGDVEVIEASSASGLPRAIIAEVPRAVGEPSTSTNSNKSQEE
NT seq
7512 nt
NT seq
+upstream
nt +downstream
nt
atggacaacgggacgagatgcactctttttcttcatcgtgaacagccatcgcacagaggg
cagcaccgaagagaaagcctagccgccgtagaggtacgcgttgcaatgggactaaaggtt
tcacccgaggaatccttatatcgcaggaaacatggtgttaaaattgacaatttaaagaat
ctatggtgtgcttcctgtggtatccagcttgtgttaaaggaaactgctatcttttcacat
cccctattgggcactttacagtgtaaaaggtgcaatgatttatatgaaggaggagaatta
gttgtacctaaagtagccgaggcaagaatttgctacttatgcaaaaagcataaactatcc
aatagaattttgacatgtagcagtgccaattgcccgtttacattctgtaagctatgcatc
aaaagaaatgtgaggaacgtcgaatgcaaaggagctaaacattggcaatgtttcttatgc
aattgcaaacagttgtgggaagtacgtgccatttgtgctgcagtgcaagcatcgctacct
aagaaaaatcggcaatctaaaatgtcttgggaggatagcagcgaaaccgagagcactagt
aatgtgagcggatcggaaattgcaaaaagagagatcgaacacttgaaaaaatcaaaacag
tataggaagaacatgctggataatggaaacgtaaggaatgtcggcggacgatttttaaag
atctcggtaaactcgaggagcaataagcgaagaacaatgctcgagagacgcaaacgaaat
gatggtaccggggattcgagttccagcgaagttggtgcgtcaatcgtaaaacctgaatct
cgtgacgaatgggaaaagcaaactgtaactcgctccgaattgatgaagatcatgaagaaa
tgcctcgtcgtacgattgcataaagagacgcatgccgatttgagaaacaggagtaagagc
ttgagcaacaagcgctgtcgatacgcggctcgtgcaagttcaaagcaggaacgcgtaatt
ccaagtacttcgcaaatattgtccagagaaacgacacggcagaatgggacaagcagcagc
agcagcagcagcagcagcaggtgcacggtacctgcgagatgcgaggatgactcgaacgag
gagataagacagaatgcgagagctattaggaggacaggagcgcgaccaaatcgatccaga
gaaatgtcaattctcaagtccgacagcgaggaagaaagtgaagaaaggtctcaacaaaaa
tcacagatgttgcccgtcaattgtcgtaccagagatcggtcaaggagttccgctgcatcc
agctccgatattgaattcaagaaacgttcaatatctaaaaaaaaacggatgcatcatcag
cccgcacggcttctcgacgatataaacggagactattcgaacagaaaaaacgatcaattg
ccggaacatctaaaacgaaagttggagaagctcgtcgagaatattccgcgacatcaagaa
tcaaggcttcatgatatcatcgaagaattttataagaacgtaatgaattcttgtaagaga
tcgatgtcgctgagaaaaactgcttatacggactttcggcgtactcaagatttcactggg
ctgagcgatgtttcgacaacgatatttcattgtacgaacttgatcgataacattaaacga
aactttgaaaaggatagaaatacattgctgaggtcatatgatgattggtcacgagcatct
ggagtgacaaatgtattcaacggtatcgatcagaatgcaagcaaacaacaggtggaagtt
aataggggagcagaatacagagatggtacaaatgggggaagaacaagagacagtgtctct
ccattgcttattggtaaagataaaaaagtgacgtcctctggagctcccaatagaaaagat
aatctctcggtttcccggcatcgacgcactgaggaagagttttcggaatgtgacaccgaa
gaaatattctcggaaaatgagacgtcgaaaccccttgaacagaaagctgcgaaggacgat
cttaataagaatttttgcgggaaggcattcgaggtaggccgatcacaccattcaaagggg
aataatacaagctctgaaacaattgtagccgagaagatgggcttactggatgctgcaagt
gaaaatagtgataaagactcatacgatgtagagaatccaacgagggtagcagatgagacg
actaagaagaatcctcgttccgatgatgacgttgaatctgtaattcataacaatgctact
gtctcgtccttgtcgcagaaagttcacgtgtccgagaacatttccggggacagcagcttc
gtagaaactagcgaaccggaagatcattcgtattccaggatactcaaacgaaagactttg
gttgaacgttcgattgcacaagagaggtcagaggttcaagtgagtgctgcgagcagtgta
ttagcaaagaaagtggaaaggtcgaccgcaacgggtcgactctcagaatcagggtcaagt
acaggcattggcatgactataggtacggatagatacattttgaacgataccgaggtaaga
gataataccgatatgaattctgcgaaatctacgcaacctattaatgcagtaaccgagaag
gataacgttaaagagatgacaagtggtttcgaagaagaacctgagaaggtgggcaatgat
acgaatgagtcagggaagagtccctcttcgacggaagagaaagacatgcggcatgttggg
gttgcgacggaaggaaagaaggagttgcatgaggctgccgactgtgatgcggaggagagg
aacaaaattgacgattctctgaatcttaatttgggtaaaaatatgagaaaattatcaggg
atgaaaagtgtgatggcgctaaggaagagagaagatagagaatcctcagatgaggaatcg
acacttccggacgagcagggagattccgaggtatttgctagaaggcaacttcttgattcc
ctgtctgagaattcggatgaggcagataaacttcgaatttcggagaaaatgtttctgagc
agcacatcatccgtgaataggcgaagcggcgaggagcgttcttcggatgtcgacagcacg
tgcagcacagtgatactggccgattctataaaggatatcggcaagtcgaagcaagcggta
attctagcaaaaggtgctgcgaccgagctcgaaggaaacgcagactcgtcgaaggacgag
gcggatttggattccgtcgagaggacagaatcgactgttgctgccgttcccttgaaaagg
aagaaatttgagaatcagactgatcgtctatcggaccttcatattgatgatgggcgagcc
aaagagattctccttttgtcgtcctcgggctcttcggataaagatacgaccacggtgttc
tctcacgactcggggaggacaaggagtacttctgacactgattcgagtcgtgcctctgtc
acatcgcaagattcgttattgcgtagcagcatgttgaaaaagcgaaaattcaagtgtcaa
aacaattactggtactctaatgactcaagactaagacaacgcagtttcgttctgattgag
aggattaacgaaaaagatcttgagccatatacacgcgtactaaacgagtcgaggagacgt
ttggagaataaagaatataaaagattatttgacttggatagtatcgaacggagggcgcag
gacaagagaagtgacgcggaagagaaggatcagcaggaggagtcggccgtgttttcgaaa
ggactgaaggacggaagaagaaggagacagttgaacgaggagaaggaagatactctattg
gatcatctgaataaggtcgaaaacggccaagttgtgtctgcgaatgatcatgaatccgaa
aactatacgaataaagaatcgctcggcgaatgtaatgtaatttctgcgaagaacgcggag
aaccgtcgctttggtgactctgacacaattgcaagggctctcctactccatagcagttcc
gatagcaatagcgaaatgttcgaattaactcagaacgaaaatgaacacgagaatgatgtc
tgctcgagcagccaaaatagcaagacaaagaagtctaagaagaaagacgaggaacattct
tccgaagacaaggaggaaaggaaatccaagaaggagagatctgcatggaggcgcagcaaa
gtgttaaggggcagattatcagattccgattccaaggaagaggataataagtggcggaga
tctcagaagatactcgaggaaaaagaaaaacagggttccgaggacgatagcgacgtggcc
gagaggataaaattgaaacggaagaggacgaagcgaagactgctgggctccgattccgat
tctgattcccgtaaattttccaagagcagcgaagactcaaatgattccctacagaatcga
aatagtaaaaaaactgaggatgactcagaggagaagacgaagacggagaagaaacgactc
agaggagtctcagattccgcgagttctgaatcgattatagaaaaaaagaaaaggtttaaa
agacgtcgaataaaggcaatggctagcgacagcagcgacagtggcagtatgtcgaattct
cagagttcaccgggaaagtctggtcgtaagaatattcgaaagttattaaaggacaacaga
gtggcggacaatacgaaacaagcggccaaggaggaagaggaaagattgaagcgcattgct
gagcgtcagaaattatacaatgaaatgtatgagatccgtttggctggcgaagaaagagtt
gaaaagttaatattggatttcgatgaggagacaaaacaggaactcgtgagcgttcacaaa
gacctagttaaacgattgaagccgcaccaggctcaagggattaaattcatgtgggacgcc
tgcttcgagtcacttgcgcgaatgaaattaaataaaggttccggttgcattgttgcacat
tgcatgggtcttgggaaaagctttcaggtggtcacgctcgcacacactctaataacgcac
gaggagattggcgttaaaaccattatggttgtctgtcccttgagtacagtcctcaactgg
gtaaatgaatttaaaatctggttgaaagacgtgaacgagggcaccgacgtcaggatattc
gaaatgacaaggctgaagaagaattacgagagaatgcgtcacctcgagcagtggcagcgc
cgtggaggtgtcctcataattggttatgaaatgtttcgtaatctgagtaacggcggtaag
agaacgcgtaaaaatgtaaaagaggccattcttaaatgtatggtcgatccgggcgcagac
cttgtggtttgtgacgaagggcacttgttgaagaacgaggatactgcattgagcaaagcc
atgaggcaggttaagactcttcgaagaatagttcttaccgggacgcctctacaaaacaac
ttgaaggaatatcattgtatggttcaatttgtcaaaccaaatcttctcggtacgaaaaag
gagtttatgaatagattcgtaaatcccataacgaatggtcaattcgatgactcgacggca
gctgatgtcaagcttatgaagaaacgagcccacgttctgcacaaaatgctcgaggggtcc
gtgcagaggttcgattattcagtgctcatgccctttctgccaccgaaacaagaatacgtg
atatttgtaaaattaactgacgtacagatacagctgtaccagcattacctggacaatttt
gcaagaaaacatcgcggcgccggcggatccttgtttgctgacttccaagcgctgcaaaga
atctggacgcatcccatggtcctgagatggaacacggaaaaaatggaaaaggccaatgag
aagaggctttcggatagcgataccgaaggatcactcaaggatttcatcgatgacggtagc
gattctgagagctctcagagtccgagtgacagcagtgacgtgcaagtgatccgcgactcc
ggggacgaaaaacgtgaaccaagaggaaatcctatcgccgaaccagaagcaaaggaagac
gcgaacgcagactcttccgactggtggtgtcaattcgttaaaccggagcattttgacgac
atgagggtttccacaaagttgagcctactcttcgggatacttaaggagtccgagcaaata
ggtgacaaagttctcgtcttctcgcaatccttattttcactgacgttgatcgagcatttt
cttcgtatgattgacgatgagacacaactgggaaataacttggatcgattggagggacat
actggcaattggagcttgggttcagattactttcgcctggatggacaaacctctcctgag
aatcgtaacaattggtgccgccggttcaatcaatcctcgaacacgagggcacgcttgttc
ctgatatccactagagccggtggtctcggaataaatctgactgctgccaatcgcgtcatc
atcttcgatgccagctggaatccgtcgcacgacgtacagagcatcttcaggatatatcga
ttcggtcagaagaaaccgtgctacgtctatcggttccttgcttacggcacaatggaggaa
aaaatttataatcgtcaagtgacaaaactctcgctttcgtgtcgcgtcgtcgatgagcaa
caaattgaacgtcactatagcaataacgatctagccgagttgtacaagttcgagccgcac
ggggacaaagacaagcctactctaaacttgcccaaggataggctattggccgatatattc
ctcaaatgcaaggattcagttgagaattatcacgagcacgactccctgttggaaaacaag
gccgaagaggaactggacgaggaagaacgtaagcaagcttggctcgagtacgaggaggag
aagaaaggaaaaccaccggtatctctggcctcgttaaaccaccagtccaattattatttt
caacatcaatttaatgcttcccagatgggtgattattctaatcccttggatcagaataaa
atgatgatgcgtcttgattatgaaaatcttcagcagctcatacgaaaagattatccgaac
cttacggaagaacaacaaaaaacaatcaccaatcggacgatactcgacatgtacaattat
ttggagaagcaagctgttcaccaacttcctgcgaatccaatgaacatgggttatcctaca
ttggatacagtaccgcgaatgggtaatatgcaaggcgcgattcaacaacaaatgatgtac
cagcaacagatgcaccagcaacgtaggcaactgttacagcatggaaatcagcagatgaac
tatgcacaacagggaaatgtcggtcagctccctagaccggaagatgttcctggaacgtcc
tcatccggcgatgttgaagtgatcgaggcgtcctccgcatccgggcttcctcgcgcaata
attgccgaggtaccacgagcagtcggagagccatctacttccacgaacagtaacaagagt
caggaggagtga
DBGET
integrated database retrieval system
