Cephus cinctus (wheat stem sawfly): 107268230
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Entry
107268230 CDS
T07523
Name
(RefSeq) trinucleotide repeat-containing gene 6C protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
ccin
Cephus cinctus (wheat stem sawfly)
Brite
KEGG Orthology (KO) [BR:
ccin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccin03019
]
107268230
03036 Chromosome and associated proteins [BR:
ccin03036
]
107268230
Messenger RNA biogenesis [BR:
ccin03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107268230
Chromosome and associated proteins [BR:
ccin03036
]
Eukaryotic type
Gene silencing
piRNA pathway
107268230
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
M_domain
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
107268230
NCBI-ProteinID:
XP_015596280
UniProt:
A0AAJ7FKG5
LinkDB
All DBs
Position
Unknown
AA seq
2131 aa
AA seq
DB search
MFPHNSSSHEISTETNAFVQNSKGDVVVLEGSSLSGVGEGEGPERARYCDIEFINSSMMA
APTSHPEATAANDFLTVLPRQSGELSSAGVGEARQSVAPATTKNPRNHLLTYDNNNKVNH
HNNAEHNHHKYRKQNTQGSPGQLGSSADNSKSTCKPLSDNKDSFSDLSVRVLKVSLNLKV
TRGDACRPAGVPSLVRIPKSDRPQRLPRLAASVDNYSLLGSRLDQGDNNNLKANLSFVSN
NNSKSVILLSSTSYGDYYLLPDGDHVRADAVAAALLVENDTSNRSKSMKLLGDKCSPVTS
FAPTSRRLDKSVILDEDNDKRRGDFLPSLLRMAGYPVKLHFDRAAEAQKFAVDTASSSIT
LIVSEDGITEHTLRSTVYLENLTRVQVPSPTSPLGHAPVTELTQRICVPLTIQCKDYVND
IANNYYYYCINDNNNNNNTTMMTTIMTINENNDDHDDFYDDYYQYGMRNLKTNAKKSEKS
SVRSHGGNMNISNNNPDVIEDIVNVALCYKTSCIMTTNVRMLGSQNDGISRTEATIFTVG
ALSFQDNDKSNKPLNASFKDDKYQVSTKVDLKSNSKVKSVSKSTLSVKSSDKSETSHTAR
LDESDDEEQVRSAVNIPTLTTCEPTMTLTRQSATVTSQTNAVPASRVENHSNDDDDDHQE
YRQHNKNNYHKHYEHQYQHDDDTPREESSGSYLQSDRIPINEYVTPSLRDTQINEPIPDF
IKSRKMTSHQISIGNSTRLAILASTCNESTSTAFAAASRKAELISLVRAIIPALNRKLEE
FDESQCEDERRQLKDALSILFERTTSKRCQDLQEPIMDYKRRWGIPAILGLAGGGESSLN
SGGAANWGTTQATTPNNNNAAQSGWGGTPGNPPGSAGPPSNWGGNNVNRSVTGNPNQNQN
QGPPGTQNNPGNVNKANNPNQPPNSQSGPPTTQSNTAAQGNQNNAQWPQGKSNSGGPGQN
PSAQNNNSSAGQPQQQPPGPNANNNPASNPPQGAVTPGTAPAANNPSTKQQLEQLNTMRE
ALFSQDGWGCQHVNQDTNWDVPTSPEPSMTKDGVPMWKPPVNNGTDLWEANLRNGGQPPP
QQQAKTPWGHTPSTNIGGTWGEDDDAADSSMWTGAPTPSQPNTAQWPGGAGGNQAGSSWG
DPRIDPRDPRDLRPVDPREMRDPRDHRMSLDPRDHMRVMDPMGRDHRMADMRGDSRGISG
RLNGASADAMWGQPPGPPHHQMGHQHPSGPPVKMLNPSSMNQWAAPPPKDMMPGKPSGWE
EPSPPTQRRNVPNYDDGTSLWGNPGANQRAMPGSKVSHWKDLPTPNLGRGGSQPGMQCPP
GMPQNRMPGQPGMKPDVGGPMWGHPGGPAGRNGSWVDGPHDAAGWDDPKTPAGWNEPQLN
PATWGGPTAHKPKPMGPSGSWADSEMDPTPSWGHQTKPALTKEVIWNSREFRYLCDLGYK
KEDVEVALRSREMNRDEAQELLNQLRPVDQWRRHDAHAGYDPTNQVTPAPAYPRFNHVAQ
QMSFPPGAGVPSGAATGGVSGSVASASLLKLQQQQQQQAGVQLQQQQPSANAPQPPFNQA
SRTPQNQPSTQQLRMLVQQIQLAVQEGYLNHQILNQPLAPQTLILLNQLLQQIKVLQQLH
QQHSVQTSLKGNSQTLLQISVQITKTKQQITNLQNQIAVQQATYMKQQQQQQHPAAPSQA
SEYYKTSVHDPMSALQNSFSDLTMNKEPSVSQQQSRLNQWKLPSLDKDGDIATNEFSRAP
GTTSKPPTTPGGLAQSHSSPNMNPLLGQGDGTWSSRLGDSGWPDAGNSDSTDGKDWQPGG
AAFTDLVPEFEPGKPWKGPQMKSIEDDPSITPGSVVRSPLSLAAIKDPDAIFSSSTKTSP
PPQSANVDTSIPSLSNSTWSFNPPATTPSAFTSSKNTWGDSAPPPTSVTSELWGAPMSKA
RGPPPGLGSKGAANASNGWGAGLGSVSRSSSSWGLQSSAGGNTGWVSTWLLLKNLTPQID
GSTLKTLCMQHGPVQDFRLYLNHGIALTKYSSRDEAIKAQGALNNCVLGNTTIFAESPAD
SEVHTLLQQLSHGGQQQTGGSGGSGWGLRPTSKAGPPPDTWGGSSSQLWGAPPSTNSLWS
NTGIDSSDQQRATPSSLNSYLPGDLLGGESM
NT seq
6396 nt
NT seq
+upstream
nt +downstream
nt
atgtttccacacaattctagttcacatgagatttctaccgaaacaaatgccttcgtacaa
aattccaagggggatgtagtagtattagagggtagcagtctgagtggggtgggggagggg
gaaggaccagagcgcgctaggtactgtgatatcgaattcataaacagcagcatgatggca
gcacctaccagccaccccgaagctaccgccgccaatgacttcttaaccgtcctaccacgc
caatctggtgagctcagctcagccggtgtaggcgaggcccgccagtcagtggcgccagca
accacaaaaaatccaagaaatcaccttctaacctacgataataataataaagtaaatcac
cacaacaatgcagaacataatcatcacaagtacagaaagcaaaacacacagggctcgcct
ggtcagctgggcagctccgccgataactctaagtctacttgtaagccgttaagtgataat
aaggatagctttagcgatctaagcgttagggtactaaaagtaagtttaaatctaaaagta
acgaggggcgatgcgtgccgccccgctggggtacctagcctagttaggatacccaagtct
gatcgcccccagcggctgccgcgtctcgccgcctccgtcgacaattactccttactaggg
tcccgccttgaccagggcgacaacaataaccttaaggctaatcttagtttcgtaagtaat
aataactcaaagtctgtgatattgctcagctcaaccagttacggtgactactatctcctc
cccgatggcgaccacgtccgagcagacgccgtcgccgcggctcttctagttgaaaacgat
acttctaacagatcgaaaagcatgaaattactaggtgataagtgctcccccgttaccagt
ttcgctccgacctcccggcggctcgacaaaagcgtaatcttggacgaagacaacgacaaa
cgccgcggcgattttctcccaagcctcctgcggatggcaggataccccgtgaaattgcat
ttcgatagagccgcagaggctcagaaattcgcggtcgacaccgccagttcttccattacg
cttatcgtttccgaagacggaatcaccgagcacaccctgcgatctactgtttatctggaa
aatctcacgcgagtccaagtaccatctcctacttctccactagggcacgctcccgtgacc
gagctgacgcaacgcatatgtgttccattaacgatacaatgtaaggattacgttaacgac
attgctaataactattattattattgtattaatgataataataataataataatacgacg
atgatgacgacgattatgacgatcaatgagaataacgatgaccacgatgacttctacgac
gactactatcaatacggaatgaggaacctcaagaccaacgcgaagaagagcgagaagagt
agcgttaggagtcacggaggaaatatgaatattagcaacaataatccagatgttatcgaa
gacattgttaacgtcgctttgtgctacaagactagttgtataatgactactaatgttagg
atgttagggtctcaaaatgatggtattagccgtaccgaagcaacaatatttactgttggt
gctctttcatttcaggataacgataagtctaacaagcctctaaacgctagctttaaggac
gataagtatcaagtgtctactaaggttgatcttaaatctaactctaaggttaagtctgta
tctaagtctacgctaagcgttaagtctagcgataagtctgaaacgtctcacaccgctcga
cttgacgaatctgacgacgaagagcaagttcggtcggccgtcaacattcctacattgact
acctgcgagcctacgatgacgcttacacgccaatcagccaccgtcacatcccaaactaac
gctgtacctgcctctcgagtcgagaatcactcaaacgacgacgatgacgaccatcaagaa
taccgccaacacaacaagaacaattatcataaacactatgaacatcagtatcagcatgat
gacgacactcctagagaagaatcctctgggagctatctccaaagtgatcgtatacctatt
aacgagtacgttacgccgagtcttagagacactcagatcaatgagccaattcctgatttc
attaaatcacgaaaaatgacgagccaccaaatctcaattggcaattcaacgcgactcgcc
attttggcttccacgtgcaacgaatcaacgagcactgcgttcgccgcggcttcgcgaaaa
gcagaactgataagtctagtacgtgccatcattccggctctcaacagaaaactcgaggaa
ttcgatgagagccaatgcgaggatgagcgccgtcaactcaaggacgccctgagtatcctc
tttgaacgcaccacgtccaagcgctgccaggaccttcaggagccgatcatggattacaaa
cgacgatggggcatcccggcgatccttggtttggcaggcggcggagaaagttccttgaat
agtggtggtgctgccaactggggaactactcaagctactacacccaacaataataatgct
gcccagtcaggatggggtggtacacctggaaatcctccgggaagtgctggacctcctagc
aattggggtggtaacaatgtaaatcgatctgttactggaaatcctaatcaaaatcagaat
cagggtccgcccggaacgcagaataatccaggcaacgtgaacaaagctaataaccctaat
caaccgccgaactctcagtccggcccaccaactactcagtcgaataccgcagcccagggt
aatcagaacaacgcccaatggcctcaaggcaagtccaacagtggtggtcctgggcaaaat
ccttccgcgcagaacaacaacagcagtgccggacaaccgcagcaacagcctccgggtccc
aacgccaacaataatccagcaagtaacccgccccaaggagctgttactcctggcaccgca
cctgccgccaacaacccatcgaccaagcagcagctagaacagctgaataccatgagggag
gccttgttcagtcaagatggttggggctgtcaacacgtaaaccaggataccaactgggac
gtaccaacctcaccagagccaagcatgaccaaagatggcgtaccaatgtggaagcctcca
gtgaacaacggcactgatctatgggaagcgaacttgcgcaacggcggacaaccgccacct
cagcaacaggcgaagacaccctggggtcacactccttctacaaacatcggtggaacctgg
ggcgaggatgacgatgcagcggactcatctatgtggactggagcaccgacaccgagccaa
cctaacactgcccagtggcctggcggtgccggtggtaaccaagctggatcaagctggggc
gatcccaggatagatcccagagatccaagggatctgagacccgtagatccacgtgagatg
cgcgatccacgtgatcatcgtatgtcattggatccgcgagatcacatgcgcgtaatggat
ccaatgggtcgcgaccatcgaatggccgacatgcgtggggactcacgtggaatttctgga
cgtctcaatggcgcaagcgccgacgcaatgtggggtcagcctccgggtccacctcatcat
caaatgggccatcagcatccttcaggaccacccgtgaagatgctgaatccctcaagtatg
aatcaatgggctgctccgccaccgaaagacatgatgccaggaaagccatctggatgggag
gaaccatcgccacccactcaaagaagaaacgtaccgaattacgatgacggtaccagcctc
tggggtaaccctggtgcgaatcaacgagccatgccaggtagtaaagtctctcactggaag
gacctacccactccgaatctgggacgcggaggttcacaaccaggtatgcagtgcccaccg
ggtatgccacaaaatcgaatgccaggacagccaggcatgaagccagacgtcggtggacca
atgtggggacatcctggtggtccagccggtcgcaatggctcctgggttgacggtccacac
gatgcagctggttgggatgatcctaagacaccagccggctggaacgaacctcaattgaat
ccagcgacctggggtggacccacggcacataaaccaaaaccaatgggacccagcggcagt
tgggcagattctgaaatggatcctacacccagttggggccatcaaactaaaccagctcta
actaaggaagtcatatggaacagtcgcgagttcagatatctctgcgatttgggttacaag
aaggaggacgtggaggtcgcgctgcgaagccgcgagatgaacagagacgaagcacaggaa
cttttgaatcaacttcgtccggttgaccagtggcgccgccacgatgctcacgccggatat
gatcctactaatcaagtaacaccggcaccagcctatcccagattcaatcacgttgcgcaa
cagatgtctttcccgccgggggccggtgtgcccagcggggctgccactggcggtgtaagt
ggctccgtggccagcgccagccttctcaagctccagcaacagcaacaacaacaggcaggt
gttcagctacagcaacaacagcccagcgccaacgcgccgcagcctcctttcaaccaggca
tcgcgaacgccgcaaaatcagccgagcacgcagcagctgcgcatgttggtacagcagatc
cagctggcagtgcaagaaggatacctgaatcatcagatcctgaatcagccactggcaccc
cagacgttgatcctcctgaatcagttgctgcagcagatcaaagtgctgcaacagttgcac
cagcaacactctgtgcagacgtccttgaaggggaacagtcagacgctcctgcagataagc
gtgcagatcacaaagactaagcagcaaataacaaaccttcagaatcaaattgccgtgcaa
caagcgacttacatgaagcaacagcaacagcagcagcatcccgcagcgccatctcaggca
tccgaatactacaagacttcggtccacgatcccatgtctgccctacagaatagcttcagc
gacctaactatgaacaaggagccttcggtgagtcaacaacagtccaggttgaaccaatgg
aagttgccatcactcgacaaggacggcgatatcgccacaaatgaattctcacgtgctcct
ggcacgacgagcaaacctcctaccacacccggtggattagctcagtcacacagcagccct
aatatgaacccgttgcttggacagggtgatggcacctggtcatccagattgggagacagc
ggatggcccgacgctggcaacagtgactccactgatggaaaggactggcaaccgggtggt
gcggcattcaccgacctagtgcccgaatttgaacctggcaagccatggaagggtccccag
atgaaaagcattgaggatgatcctagtattacacccggctcagtagtgcgttcaccactg
tcgctggcagcaattaaagatcctgacgcgatcttctcctcgagcaccaagacttcaccg
ccaccacaaagtgccaacgttgacacttctattcccagcctcagcaactcaacctggagc
ttcaatccgcccgccactactcccagtgctttcaccagctcgaagaacacttggggagac
tcggcgcctccacctacgtcagtgacgtctgaactctggggcgcgcccatgagcaaagcc
cgaggaccacctcctggcttaggcagcaagggtgccgcaaacgccagcaacggctgggga
gctggccttggcagtgtcagcagatcctctagctcctggggcctccagtcgagcgctggc
ggcaacactggttgggtgtcgacctggttacttctaaaaaatttgacaccccaaatcgat
ggatcgaccctgaagactctgtgcatgcagcacggacctgtccaagattttcgtctgtac
ctgaaccacggaattgcccttactaaatactcgtccagggacgaagctattaaggctcaa
ggcgcattgaacaattgcgtcctcggtaacacgacgatattcgcagagtcacccgcggac
agcgaggtgcacacgcttctacagcagctcagtcacggcggtcagcaacagactggtggc
tccggtggtagcggttggggcctaagacccaccagcaaagcgggaccacctccagacaca
tggggtggcagttccagtcagctctggggcgcaccgccttcgaccaactccttatggagc
aacaccggcatcgacagcagcgatcagcaacgagcaactccaagctctctcaactcgtac
ttgcccggagaccttctgggaggtgagtcgatgtag
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integrated database retrieval system
