KEGG   Cephus cinctus (wheat stem sawfly): 107268373
Entry
107268373         CDS       T07523                                 
Name
(RefSeq) THO complex subunit 6 homolog
  KO
K13175  THO complex subunit 6
Organism
ccin  Cephus cinctus (wheat stem sawfly)
Pathway
ccin03013  Nucleocytoplasmic transport
ccin03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107268373
  09122 Translation
   03013 Nucleocytoplasmic transport
    107268373
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccin03019]
    107268373
   03041 Spliceosome [BR:ccin03041]
    107268373
Messenger RNA biogenesis [BR:ccin03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     107268373
Spliceosome [BR:ccin03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    107268373
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40_WDHD1_1st Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_THOC3 WD40_CDC20-Fz WDR55 Beta-prop_EML_2 Beta-prop_TEP1_2nd NBCH_WD40 Beta-prop_WDR3_2nd ANAPC4_WD40 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd Beta-prop_EML EIF3I Beta-prop_ACSF4 Beta-prop_WDR41 WD40_Gbeta Beta-prop_IFT122_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_IFT140_2nd Beta-prop_NUP159_NUP214 Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_DCAF12 Beta-prop_WDR19_1st Beta-prop_RIG_2nd Beta-prop_IP5PC_F WD40_like Beta-prop_WDR90_POC16_2nd Beta-prop_Vps41 Beta-prop_LRRK2 Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 107268373
NCBI-ProteinID: XP_015596575
UniProt: A0AAJ7BYB3
LinkDB
Position
Unknown
AA seq 331 aa
MPGHANQKLFYNTVLCQTFSPNGSHLLAGNIYGDVSVFDLSKVLGPYQGEENNLRGPNYH
FTAYPDQHVESIIATDNFLVTGTSGEISGWDWKIVTSNKAPKMKASWTVQIPSNKDSYEK
PDVNYMVYSKENHMLYAGCGDNNIYVINLDNGKILQTLDGHKDYIHCLALMGNQLASGAE
DGTVRLWDLRKKENTNVLQPHAIEKIARPRLGKWIGALDFTEDWLLCGGGPKLSLWHMRT
MEAATVFDLPDQGIHVADIYEERIITGGSMSHVHHLTYQGDTLAEVPTSSNTIYNIIYQE
KPQKILSIAGTSNKIDICTNFNYREMTLKFA
NT seq 996 nt   +upstreamnt  +downstreamnt
atgccgggacatgcaaaccagaaattgttttacaataccgtactttgccaaactttttca
ccaaatggcagccacttacttgctggaaatatttatggcgatgtatctgtattcgattta
tccaaagtattgggaccttatcaaggtgaagaaaataatttgcgaggaccaaattatcat
ttcactgcttaccccgaccaacatgttgagagtataattgcaactgacaactttcttgtt
acgggaacgtctggagaaatttctggatgggattggaagattgtaacatcaaataaagct
ccaaaaatgaaagcttcttggactgtgcaaattcccagcaataaagatagttatgaaaag
ccagatgtgaactacatggtgtattctaaagaaaatcatatgctgtatgctggatgtggt
gacaacaatatttatgttattaatttggacaatggaaagatattgcagacattagatggt
cacaaggattacatacactgtcttgctctaatgggcaatcaattggcatctggtgcagaa
gatggtactgtcagattatgggatttacgaaaaaaagaaaatacaaatgtactacagcct
catgctatagaaaagatagcacgaccaaggctaggcaaatggattggtgctttggatttc
actgaagattggctactttgtggtggtggtccaaaactgtctttgtggcacatgcgcact
atggaagcagctactgtatttgatttaccagatcaaggaattcacgttgcagatatttac
gaagaacgcataataacaggtggtagcatgtcccatgtacatcaccttacatatcaggga
gacacattagcagaagtaccaacatctagtaatacaatttataatatcatttaccaagaa
aagccccaaaagatattgagcatagcaggtacaagtaacaaaattgatatatgtactaat
ttcaattatcgagagatgacattgaagtttgcataa

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