Cephus cinctus (wheat stem sawfly): 107268373
Help
Entry
107268373 CDS
T07523
Name
(RefSeq) THO complex subunit 6 homolog
KO
K13175
THO complex subunit 6
Organism
ccin
Cephus cinctus (wheat stem sawfly)
Pathway
ccin03013
Nucleocytoplasmic transport
ccin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107268373
09122 Translation
03013 Nucleocytoplasmic transport
107268373
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccin03019
]
107268373
03041 Spliceosome [BR:
ccin03041
]
107268373
Messenger RNA biogenesis [BR:
ccin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
107268373
Spliceosome [BR:
ccin03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
107268373
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_WDHD1_1st
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_THOC3
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
NBCH_WD40
Beta-prop_WDR3_2nd
ANAPC4_WD40
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
EIF3I
Beta-prop_ACSF4
Beta-prop_WDR41
WD40_Gbeta
Beta-prop_IFT122_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_IFT140_2nd
Beta-prop_NUP159_NUP214
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_DCAF12
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_IP5PC_F
WD40_like
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
Beta-prop_LRRK2
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
107268373
NCBI-ProteinID:
XP_015596575
UniProt:
A0AAJ7BYB3
LinkDB
All DBs
Position
Unknown
AA seq
331 aa
AA seq
DB search
MPGHANQKLFYNTVLCQTFSPNGSHLLAGNIYGDVSVFDLSKVLGPYQGEENNLRGPNYH
FTAYPDQHVESIIATDNFLVTGTSGEISGWDWKIVTSNKAPKMKASWTVQIPSNKDSYEK
PDVNYMVYSKENHMLYAGCGDNNIYVINLDNGKILQTLDGHKDYIHCLALMGNQLASGAE
DGTVRLWDLRKKENTNVLQPHAIEKIARPRLGKWIGALDFTEDWLLCGGGPKLSLWHMRT
MEAATVFDLPDQGIHVADIYEERIITGGSMSHVHHLTYQGDTLAEVPTSSNTIYNIIYQE
KPQKILSIAGTSNKIDICTNFNYREMTLKFA
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgccgggacatgcaaaccagaaattgttttacaataccgtactttgccaaactttttca
ccaaatggcagccacttacttgctggaaatatttatggcgatgtatctgtattcgattta
tccaaagtattgggaccttatcaaggtgaagaaaataatttgcgaggaccaaattatcat
ttcactgcttaccccgaccaacatgttgagagtataattgcaactgacaactttcttgtt
acgggaacgtctggagaaatttctggatgggattggaagattgtaacatcaaataaagct
ccaaaaatgaaagcttcttggactgtgcaaattcccagcaataaagatagttatgaaaag
ccagatgtgaactacatggtgtattctaaagaaaatcatatgctgtatgctggatgtggt
gacaacaatatttatgttattaatttggacaatggaaagatattgcagacattagatggt
cacaaggattacatacactgtcttgctctaatgggcaatcaattggcatctggtgcagaa
gatggtactgtcagattatgggatttacgaaaaaaagaaaatacaaatgtactacagcct
catgctatagaaaagatagcacgaccaaggctaggcaaatggattggtgctttggatttc
actgaagattggctactttgtggtggtggtccaaaactgtctttgtggcacatgcgcact
atggaagcagctactgtatttgatttaccagatcaaggaattcacgttgcagatatttac
gaagaacgcataataacaggtggtagcatgtcccatgtacatcaccttacatatcaggga
gacacattagcagaagtaccaacatctagtaatacaatttataatatcatttaccaagaa
aagccccaaaagatattgagcatagcaggtacaagtaacaaaattgatatatgtactaat
ttcaattatcgagagatgacattgaagtttgcataa
DBGET
integrated database retrieval system