Cephus cinctus (wheat stem sawfly): 107268478
Help
Entry
107268478 CDS
T07523
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
ccin
Cephus cinctus (wheat stem sawfly)
Pathway
ccin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107268478
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccin03019
]
107268478
Messenger RNA biogenesis [BR:
ccin03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
107268478
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
107268478
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
ECR1_N_2
RRP40_S1
EXOSC1
Motif
Other DBs
NCBI-GeneID:
107268478
NCBI-ProteinID:
XP_015596772
UniProt:
A0AAJ7BXD5
LinkDB
All DBs
Position
Unknown
AA seq
294 aa
AA seq
DB search
MDECPPITVRLAVDRTDMNLTAGENIGFYTPGQEVSSQTGFMRGHGTYVDEEETLRASVA
GVLEKVNKLISVRPLKTRYQGEIGDVVVGRITELQQKRWKVDTNSKMDSVLLLSSVNLPG
GELRRRSAEDEQTMRRYLQEGDLICAEVQSTFADGSLSLHTRVLKYGKLSQGIMLKVSPA
LIKRKKTHFHNLANGAILILGNNGYVWIGANTQEKDQSEGGFTQDLSRVALQDREICARL
RNCILILAECNILLTDTSVTYAYEESMKYTPSELLQSEAIIDVALLTQQRLSQF
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggatgaatgcccgccaattactgtgcgtttagctgttgatcgaacagatatgaattta
acggctggtgaaaatataggattttataccccaggtcaagaggtttcaagtcagactgga
tttatgagaggtcatggaacatatgttgatgaagaagaaacactgcgagcatcagtagct
ggagttttagaaaaggtcaataaattgatatcggtgagacccttaaagactcgatatcag
ggtgaaattggcgatgtggttgtcggccgaatcaccgagttacaacaaaaacgctggaaa
gtagatacaaactcaaaaatggactcagtacttttactttcaagtgttaatttgcctggc
ggagaattgaggagaagatcagcagaggatgaacaaacaatgagacgttacttacaagaa
ggagatttgatctgtgccgaagtacagagtacctttgcagatggatcactatctcttcat
acacgtgtgttgaagtatggtaaattatcgcaaggaatcatgttaaaagtttcccctgct
ttgataaaacgcaagaagacccactttcataacttagctaatggagctatcttaattttg
ggaaataatggatatgtgtggattggtgcaaacactcaagaaaaagatcaatcggagggt
ggcttcacgcaagatttatctcgagtagcattacaagatagagagatctgtgctcgtctg
agaaattgtatattaattttggctgaatgcaacattctcttaacagatacctcggttaca
tatgcttatgaagaatccatgaaatatacccccagtgaattactccaatccgaagcaata
attgatgtagcattactaactcaacaaagattgagtcaattttaa
DBGET
integrated database retrieval system