KEGG   Cephus cinctus (wheat stem sawfly): 107268478
Entry
107268478         CDS       T07523                                 
Name
(RefSeq) exosome complex component RRP4
  KO
K03679  exosome complex component RRP4
Organism
ccin  Cephus cinctus (wheat stem sawfly)
Pathway
ccin03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ccin00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    107268478
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ccin03019]
    107268478
Messenger RNA biogenesis [BR:ccin03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     107268478
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     107268478
SSDB
Motif
Pfam: RRP4_S1 KH_6 ECR1_N ECR1_N_2 RRP40_S1 EXOSC1
Other DBs
NCBI-GeneID: 107268478
NCBI-ProteinID: XP_015596772
UniProt: A0AAJ7BXD5
LinkDB
Position
Unknown
AA seq 294 aa
MDECPPITVRLAVDRTDMNLTAGENIGFYTPGQEVSSQTGFMRGHGTYVDEEETLRASVA
GVLEKVNKLISVRPLKTRYQGEIGDVVVGRITELQQKRWKVDTNSKMDSVLLLSSVNLPG
GELRRRSAEDEQTMRRYLQEGDLICAEVQSTFADGSLSLHTRVLKYGKLSQGIMLKVSPA
LIKRKKTHFHNLANGAILILGNNGYVWIGANTQEKDQSEGGFTQDLSRVALQDREICARL
RNCILILAECNILLTDTSVTYAYEESMKYTPSELLQSEAIIDVALLTQQRLSQF
NT seq 885 nt   +upstreamnt  +downstreamnt
atggatgaatgcccgccaattactgtgcgtttagctgttgatcgaacagatatgaattta
acggctggtgaaaatataggattttataccccaggtcaagaggtttcaagtcagactgga
tttatgagaggtcatggaacatatgttgatgaagaagaaacactgcgagcatcagtagct
ggagttttagaaaaggtcaataaattgatatcggtgagacccttaaagactcgatatcag
ggtgaaattggcgatgtggttgtcggccgaatcaccgagttacaacaaaaacgctggaaa
gtagatacaaactcaaaaatggactcagtacttttactttcaagtgttaatttgcctggc
ggagaattgaggagaagatcagcagaggatgaacaaacaatgagacgttacttacaagaa
ggagatttgatctgtgccgaagtacagagtacctttgcagatggatcactatctcttcat
acacgtgtgttgaagtatggtaaattatcgcaaggaatcatgttaaaagtttcccctgct
ttgataaaacgcaagaagacccactttcataacttagctaatggagctatcttaattttg
ggaaataatggatatgtgtggattggtgcaaacactcaagaaaaagatcaatcggagggt
ggcttcacgcaagatttatctcgagtagcattacaagatagagagatctgtgctcgtctg
agaaattgtatattaattttggctgaatgcaacattctcttaacagatacctcggttaca
tatgcttatgaagaatccatgaaatatacccccagtgaattactccaatccgaagcaata
attgatgtagcattactaactcaacaaagattgagtcaattttaa

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