Cephus cinctus (wheat stem sawfly): 107268522
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Entry
107268522 CDS
T07523
Name
(RefSeq) probable histone-binding protein Caf1 isoform X2
KO
K10752
histone-binding protein RBBP4
Organism
ccin
Cephus cinctus (wheat stem sawfly)
Pathway
ccin03082
ATP-dependent chromatin remodeling
ccin03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ccin00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107268522
03083 Polycomb repressive complex
107268522
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccin03036
]
107268522
Chromosome and associated proteins [BR:
ccin03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
107268522
Histone modification proteins
HAT complexes
HATB complex
107268522
HDAC complexes
Sin3A-HDAC complex
107268522
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
107268522
PRC2.2
107268522
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
107268522
Heterochromatin formation proteins
Other heterochromatin formation proteins
107268522
Chromatin remodeling factors
NuRD complex
107268522
NuRF complex
107268522
NuRF complex (fruit fly)
107268522
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
EIF3I
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
WD40_RFWD3
Beta-prop_WDR19_1st
ANAPC4_WD40
eIF2A
Beta-prop_RIG_1st
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_IFT140_1st
NBCH_WD40
MIOS_WD40
Beta-prop_IFT122_1st
PEP5_VPS11_N
Beta-prop_DCAF4
YqbF
Motif
Other DBs
NCBI-GeneID:
107268522
NCBI-ProteinID:
XP_015596853
UniProt:
A0AAJ7BY80
LinkDB
All DBs
Position
Unknown
AA seq
427 aa
AA seq
DB search
MGDKDGETFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGK
DYSVHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASHYDNEKGEFGGFGSVSGKIEIEI
KINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECHPDLRLRGHQKE
GYGLSWNPNLNGYLLSASDDHTICLWDINATPKENRVIDAKTIFTGHTAVVEDVAWHLLH
ESLFGSVADDQKLMIWDTRCNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVA
LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSSEDA
EDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPDTPAS
ELEAGAS
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacaaggacggagagacctttgatgatgcggtcgaagagcgcgtcatcaatgag
gagtacaagatatggaagaaaaatactccattcttgtatgaccttgtgatgactcatgct
ttggagtggccttcgctgactgctcaatggttaccagatgtaacaagaccagagggtaaa
gattactctgtgcatcgtctcattctgggaactcatacttctgacgaacagaatcatcta
cttatcgcaagtgttcagctgcctaatgaggatgctcaatttgatgcctctcattatgac
aatgagaagggagagtttggtggttttggttctgttagtgggaagatagaaatagaaata
aaaatcaatcatgagggtgaagttaacagagcacgatatatgccacagaatccgtgtgtc
attgcaacaaaaacaccatctagcgatgtacttgtatttgattacacaaaacatcctagc
aaaccagatcccaatggcgagtgtcatcctgatcttaggttacgaggtcatcaaaaagaa
ggatatggtctctcctggaatccaaatttgaacggctacctattgagtgcatctgatgac
cacacaatctgtctatgggatatcaatgctactccaaaagagaatcgtgtaatcgatgca
aagaccatcttcacaggtcatacagcagtggtcgaggatgttgcgtggcatctactacat
gaatctctctttggatcagtggctgatgatcagaaattaatgatttgggataccagatgt
aacaacactagcaaaccaagtcataccgttgatgcccacactgcggaggtcaactgtctc
agtttcaatccttattcagaattcattctggccactggtagcgcagataagaccgtcgct
ctttgggatctgagaaacttgaagctgaaactgcattcctttgaatcccacaaggacgag
atcttccaagtacaatggtctccacacaatgagaccatcctggccagcagtggtactgac
aggcggctccacgtctgggatctcagtaagatcggcgaagaacaatccagtgaggacgct
gaggatggacctcctgaattactgttcattcacggtggtcatactgctaaaatcagcgac
ttctcatggaatccaaacgaaccctgggtcatctgttccgtgtcagaggacaatataatg
caagtttggcaaatggcggaaaatatttacaacgacgaggaaccggatacacctgccagt
gaactggaagctggagcttcataa
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integrated database retrieval system
