Cephus cinctus (wheat stem sawfly): 107268528
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Entry
107268528 CDS
T07523
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7 isoform X4
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
ccin
Cephus cinctus (wheat stem sawfly)
Pathway
ccin03020
RNA polymerase
ccin03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccin00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
107268528
09124 Replication and repair
03420 Nucleotide excision repair
107268528
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccin03021
]
107268528
03019 Messenger RNA biogenesis [BR:
ccin03019
]
107268528
03400 DNA repair and recombination proteins [BR:
ccin03400
]
107268528
Transcription machinery [BR:
ccin03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
107268528
Messenger RNA biogenesis [BR:
ccin03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107268528
DNA repair and recombination proteins [BR:
ccin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
107268528
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
Motif
Other DBs
NCBI-GeneID:
107268528
NCBI-ProteinID:
XP_015596874
UniProt:
A0AAJ7BXJ3
LinkDB
All DBs
Position
Unknown
AA seq
173 aa
AA seq
DB search
MFYHISLEHEILLHPRYFGPQLLDTVKQKLYTEVEGTCTGKYGFVVAVTTIDNIGAGIIQ
PGQGFVVYPVKYKAIVFRPFKGEVLDAIVTQVNKVGMFAEIGPLSCFISHHSIPSDMQFC
PNVNPPCYKSKEEDVVIQADDEIRLKIVGTRVDATGIFAIGTLMDDYLGLVCN
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atgttttatcatatatcattagaacatgaaattttattacaccctaggtactttggacca
cagttgctcgacactgtaaaacaaaaattatatacagaagtcgagggtacttgtactgga
aagtatggttttgttgtagctgtaacaactatagacaatataggagctggtattattcag
cctggacaaggatttgtggtttatcctgttaaatataaagctattgttttccgacctttt
aaaggtgaagtactcgatgctattgttacacaagtgaacaaagttgggatgtttgcagaa
ataggacccttgtcatgcttcatatctcatcattctattccatcagatatgcaattctgt
ccaaatgtaaatccaccctgttacaaatcaaaggaagaggacgtggtgatacaagcagat
gatgaaattcgattaaaaattgttggaaccagagtagatgctactggaatttttgctatt
ggtacgctgatggatgattaccttggactcgtgtgcaactga
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