Cephus cinctus (wheat stem sawfly): 107268703 Help Entry 107268703         CDS       T07523                                  Name (RefSeq) huntingtin isoform X1   KO K04533   huntingtin Organism ccin  Cephus cinctus (wheat stem sawfly) Brite KEGG Orthology (KO) [BR:ccin00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ccin03019]     107268703    04131 Membrane trafficking [BR:ccin04131]     107268703    03029 Mitochondrial biogenesis [BR:ccin03029]     107268703 Messenger RNA biogenesis [BR:ccin03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Common to processing body (P body) and stress granule      107268703 Membrane trafficking [BR:ccin04131]  Endocytosis   Rab GTPases and associated proteins    Rab associated proteins     107268703 Mitochondrial biogenesis [BR:ccin03029]  Mitochondrial quality control factors   Regulator of mitochondrial biogenesis    Other regulator of mitochondrial biogenesis     107268703 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Htt_N-HEAT Htt_C-HEAT Htt_bridge Htt_N-HEAT_1 Vac14_Fab1_bd HEAT HEAT_EF3_N Motif Other DBs NCBI-GeneID:  107268703 NCBI-ProteinID:  XP_024941676 UniProt:  A0AAJ7W271 LinkDB All DBs Position Unknown AA seq 2918 aa AA seqDB search MAAVNNVFKAVENLRLLRESNSLSEDYIARKKEKIANCVMIADGVCSSTVKVASKFPDIF NKSIEILLALCDDSESDVRTVAEECLNKIIRTMADGNIIKVQVKLYYEIKRNGSARSLRA ALWRFAQLSEVIRPVKGKAYVSNLIPCIVAIAQRKEESVIETLANTLPLILKTLGAFTTD NDIKTLLKAFFHNISSPEPVFRRTAASMILTTCLNSRKPEAFLCYVLNFLIDRVVPVADD KENLTTVMGVFGCLRIVLPHMNEMTTGIEVDNSQKVDSLIQIYELCLHYAKWHADHNVIN AALETLAQLLQSPSKEFASILLSKDGITRSRIWLNESAARLSLGQMSFSTTTVSGENSDS ALNLFESEIPEIEPKIEKWIAESESALPVIQRPQIRQAVPSEIIEMRGKTLENYSNLTIG SIDSDGVEEGSDVGSEIEKSETVPESVSLMTQPSKDEDSSDERGLSIASPHKSLLNIPFA EIDIGNFTNADIPLKYCCRYLASSFLLTGSVGQLIPDRMFRVSVKSLALTCIGHILRLYP RLLLSTVAKEQKYDESPQFMSDILLFADHPDPQIRGHVMMLIGCFLKAVFVQFGGRYSDV ISGDLTVSDKKEYCRTLPLDNLVKLILKGIEDESATTCRQTLMALGICLVDLLESVDNKC GIPILTILPRLVKNPYFLVKVKLAEVLAILPYSTIEHITGGSQFQENVIKVLIKLLSDQD QRVRHVTSNSIVKIIPMLYYRNPNEDAITRKASQYTEEYLSSSVLNPLETSNYEIGDNRL LVNSLVEPFNFLYTQNNIQFNERIDNALSQIVSVLTETVIMDFSKYLTYGCCEALTRLSE SYFTTIYPKAWDCLVPKPPAKKTYRRSNSRGDVNDNSLLNDIVLPICNGLMPFTISLLSS SQISLDLSTHRHLILLAGNLASGMAFCNLKPSEPIHKNDTDTVKLWGLFKDKQMYQYLEL LLIHVARVLNVFVHVIDEIQLTQPSTKSSLPSLPTPQSLSPKRKTAAEAKPKEKEERKTT LKFGKEQMGAFSNIPHYMKLYDILKAANANYKVTLDSEASEMYISLLNATLEVLSQILEI ASIHETGRIAEEILHYLQTTVVLCPTSTVRCVQQLLKCLFGANLSAQWSEFDIQRNLDRT SVSRDDAKGFYNQCFQRPARQMAEAIKAIGNNCRGGNEPDTGWIGLLRRKGERKMSTVSK SLTRSMDQKVSVASFIRLFEPMVIKSLKQYTVTSSVSLQCQVLMLVSQLVQLHVNYCLLD SDMIFKDFIIKQFEFIEEGQIPHTEDLLPKIFNFLVHLSYNKYHTKIIIGVPEIIQLCDR LMASGQPPLTHCIPALTPVVEDIFLARNARSSSSEQKELETTREVLVSMLLKLVEHHQVI ELLAVCLTESRFSGDGNGEEKWRRWSRLTTDTVLPMLADGKIRIETKDAHAALVKLFAAV SPTVFRPVDPLLKVLFSVPPNADEPIIKLQRWLGMINVVLLTLISYAKEEVMLARLSDCS TYMTDMARLLMLPDSVYQSTEIMVDPLNVLNAQSFNVPPERILARFIFRVIELIGARVYK LLGLINNKVENSLANSTESLTCDDYLIHQFALFLQLCIHMFESGSHCKVANATMQMIQGR NIPDDEILPLMDLNTFMLEIANKCPLLTCQWAYLMTLLGYNEMIFWSKVLGIHSSSYVVR YSPSTMKPNPSDDNSSINIDIVRKGGTILFCDYVCENLSDAEPLTWLLVNHIEETINLAT ESPVRELVAAAVHRNPAASGLLVQAIAAKCLDLSKPSFVKKLLLCVEGAHNSQSGPLILA LVPRLLASKHLALSRMAAKIASRKAETLLTLSMDEANEQLPKEDLIKTMDILQSTKLAKK HSSLVILLNKLGAKHYDLSPLELEQCRPFNPSTIRSIKLDKNWFFTQTKYRCCHPSINYG SYESAQLLSNLDFDDIIDIITCREFSVKILKECIKLGVRKTLETCQDLELGQDVKEESFE FKENPLYTAAKQCLLQHVQYIVEMMPKPHHAYNPLNRDSSGKEGKHAKNSYMSRFTELLT DSEYWDFLFMIVPSVITYMRTLSKLSKFNLCEIDVKYEEHLAKFALLCFDVSHWIIHNHE NDNKKMKPHELHLTMNCAEEILRQPCLTKVFGSSTHYSWVCSAAATLTRIVEHLLTIINP LPVINTSGLQAALDSDETRPYAEACKQMATLVAWLEECQMENSPENIPPFLFNCIKNLII SISRQPLVNSFVLTPPLAWKQGWRPSTSSATKCRVPLLSSESNFLQEIDILEQFIYRVTL LGWTSRLQFEEMWMAFLSVLNVAPNKNMPQEEIANLSRATSLAVQAITRLLMQTLLLPHP GNPGTSTPIHHSRDPQLSLYKISSRKLFIIQDTLLWKYECMNDSRNVHGLKLEHIFSRGN IERVGNSHAFTYSQLSVPYLWASCYLHEDKLSSSVLTLKNRRNDALMSMSLDLNSCLRFL IELYSSWILPQSNTPLRLLNEVIKSILSISELFVERGQYQWMLDTCLEISRTHPVENEIL HQYIVIAACKAAAVLTPLDVETLEKVKRLVDINLKSDFLPAGVSALHGTLYLLQSAVLAD CEETMNMIHPLAIEYIQKHIDTQDSNGVLSQSEEHQGIMWALVFFLLEHADDTPPDSEAP AVLELVLSLVTTKNISIALHQTLLHGLERLVTTKSVVGKVTEQIVKVAIDRLRQANPMLA LPALQLLLTCMYTEAADRLNQPDVEEPLPDAEPEALIRSIERTSGIFDRIKRGYPMEVEI LCAVLSGVLGDFFPPSEILTRVIGEFLSPQQPHPRLLSAVVFQVCQRACNGPQLGLLQDW VLFSLPNFIQSLPVAMSTWCLSCFFISASTNQWLRALFPHVQSRIGKYEYEDKKILCIAA ADFYHQLSNESQRKAFVETFETAAKRPDTPFSYILASF NT seq 8757 nt NT seq  +upstreamnt  +downstreamnt atggcagctgttaacaatgtatttaaagctgtagaaaatctacgactacttcgtgaatcg aattcactatcggaggattatatagccagaaaaaaggaaaagattgccaattgtgtaatg atcgctgatggagtttgttcatcaactgtcaaagtagcatcaaaatttccagatattttt aataagtctatagaaattttattggctctttgcgatgattctgagtctgatgtaagaact gtagctgaagaatgcctgaacaaaattatacggacaatggcagatgggaatatcataaaa gttcaagtgaaattatattatgaaatcaaaagaaatgggtcagctcgttcattgcgagct gcattatggcgttttgcccaactgagtgaagtgataaggccagttaaaggcaaggcgtat gtatctaacttaattccctgtattgttgcaattgctcaacgcaaagaagaatctgtaatt gagacattagccaatactttacctttaattctaaaaacattgggtgctttcacaacagat aatgatataaagactttactgaaagcattcttccataatatatcatcacctgagccagtg ttccgaaggactgcagcaagcatgatcttaacgacttgtttaaactctcggaaacctgag gcttttctgtgttatgtattgaattttctcatagatagggttgttcctgtggctgacgac aaagaaaatttgactaccgttatgggagtattcggatgcttgcgtatagttttacctcat atgaatgagatgacaacagggatagaagttgacaattcacagaaagttgacagtttaata cagatttacgagttgtgcttacattatgcaaaatggcacgctgatcataatgtaataaat gcggccctggagacattggcgcagcttttgcaatctccctcgaaggaattcgcatccata ctactatcaaaggatgggatcactcgtagtagaatctggttgaatgaaagcgcagcacgc ttgtcgttaggacaaatgagtttctccacgacaactgtatctggagagaattcggattca gcgctaaatttgttcgagtctgaaatccctgaaattgaacctaagatcgaaaaatggatt gcggaatcagagagcgcattgcctgtaattcaaagaccacaaatacggcaagcagttcca agtgaaattatagagatgagagggaagacgctagagaattacagtaatttgaccataggc tctatcgacagtgacggggttgaggaaggaagtgacgtcggtagtgaaattgaaaaatcg gaaaccgttccggaatcagttagtctaatgacgcaaccatccaaagatgaagactcctca gatgagagaggtttgtcgattgcgtcgcctcacaaatccttgttaaatattccatttgcg gaaattgatattggcaattttacaaatgctgatataccgttaaaatattgttgccgctat ttagcatcgtcgtttttgttaacgggaagtgtcggtcaattaattcctgaccgaatgttt cgtgtcagtgtgaagtcgctagctttaacatgtattggtcacattttaaggctttaccca cgtttattattatctacggtcgccaaagaacaaaaatatgatgaaagcccacaattcatg tcggatattttactttttgcggatcatcctgatccccagatacgaggacatgtgatgatg cttattggctgttttttgaaagcagttttcgttcaatttggcgggagatactctgatgta atatcgggggatcttaccgtttctgataaaaaggagtactgtaggactttacccttggat aatcttgtcaaattaattttaaagggcatagaagacgagtctgctacaacatgccggcaa actttaatggcgctcggcatatgtcttgtcgatctactggaatctgttgacaataagtgc ggaattccaatattaacgatattaccccgtcttgttaagaatccatacttccttgtaaaa gtcaaattagccgaagtattggccatattaccatattctactatagaacacataactggc ggatcacaatttcaagagaacgttattaaagtactaatcaagttgctgagtgatcaggat cagagagtgcggcacgtaacgagtaactctattgttaagatcattcctatgttgtattat cgaaatccaaacgaagacgcgataactagaaaagcttctcaatatacagaagaatattta tcttccagtgtattgaatcctctggagacttctaattatgaaattggtgataacaggtta ctagttaacagtttggttgaaccatttaactttttgtatactcaaaataacatacaattc aacgaaagaatagataatgccctgtcacaaatcgtcagcgtattaacagaaactgtcatc atggacttctctaagtatttaacttacggctgttgcgaagctctaactagattaagtgag agctatttcacgacgatatatcctaaagcatgggactgtctagttccaaagcctccagcc aagaaaacatatagaagatcaaacagtcgaggggacgttaacgataacagtttgttaaat gatatagtattaccgatctgcaatggtctaatgccttttactatatcattattatcttca tcgcaaataagtctggatctatcaacacacaggcatttaatccttctggctggaaatctc gcatcgggaatggcattttgcaatttgaagcctagtgaacccattcacaaaaatgacacg gataccgtgaaattgtgggggttattcaaggataagcaaatgtatcaatacttggagctc ttactcatccatgtggcaagagtgttgaatgtttttgttcacgttattgatgagatacag ttgacgcagcccagtacgaaatcatcattgccttccttgccaacaccgcagagtttatcc ccaaaaagaaaaactgcagcagaggcgaaaccgaaggaaaaagaggagcgaaagacaact ttaaaattcggaaaggaacagatgggagcgttttcgaatattccacattatatgaaacta tatgatatattgaaagcagccaatgcaaattataaagtgacacttgactcagaagctagc gagatgtatatttctttattgaatgcgacgctagaagtgctttcgcaaatacttgaaata gcgagtattcatgaaactggtaggatagctgaggaaattttgcattatctgcagactacc gttgtgttatgcccgacttcaactgttcgatgtgttcagcagttattgaaatgtttattt ggtgcaaatttaagtgcccaatggagtgaatttgatatacagagaaacttggatcgaacc agtgtttccagagatgatgctaaaggcttttacaatcagtgctttcaaagaccagctaga caaatggctgaagcgataaaagctataggaaataattgcagaggtggaaatgaacccgac acaggatggatcggtttactacgaagaaaaggagaaaggaaaatgtcaacagtttctaaa agtttaacgcgatcgatggatcagaaagtttcggtagcttcgtttatacgtctctttgaa ccgatggttataaaatccttaaagcagtacactgtgacaagttcggtttctcttcaatgc caagttctaatgctagtgagtcagttggtacagttacacgtaaactactgtcttctggat tcggatatgatttttaaagattttataatcaagcaatttgaattcatcgaagagggtcag atacctcatacagaagatctcttgccaaagatattcaatttcctggtacatctgtcctac aataaatatcacacaaaaataataattggagtaccagaaatcattcagttatgtgataga ttaatggctagtggtcaaccacctcttacgcattgtataccggctcttacacccgttgtt gaagatatatttttggcaagaaatgcaagatccagttcatcggagcaaaaggaacttgaa acaacccgggaagtcctggtgtcaatgctcctcaaattggttgaacatcatcaagtgatt gaacttctagctgtttgtctcacggagtcacgattcagtggtgatggcaatggtgaagaa aaatggcgccgatggtctagattaacgacagacactgtactgcctatgttagccgatgga aaaattagaattgaaactaaggatgctcatgctgctttagtgaaactgttcgcagctgtt tctccgactgttttcagaccagttgatccactgcttaaagtactgttttccgtaccaccc aatgccgacgagccaattattaagctacaacgttggttaggcatgatcaatgttgtatta ttaaccttaatatcctacgcaaaggaggaagtcatgttggctaggctttcagattgcagt acatacatgacggacatggcacgattattgatgttgccagattctgtttatcaatcgaca gaaatcatggtggatccattgaatgtactaaatgcacaaagctttaatgtaccacccgaa aggattttagccagatttatattccgagtgattgaattgattggtgccagagtatacaag cttcttggactgattaataataaagtcgagaattctctggcaaattcaactgagagtttg acttgtgatgattatttgatacaccagttcgcattatttttacaattatgcattcacatg tttgagtctggcagtcattgcaaggtagcaaacgcaactatgcaaatgatacaaggtcgt aatatccctgatgatgaaatattgccactgatggatctaaatacgtttatgttagaaatt gctaacaaatgtcctcttcttacatgtcagtgggcatatttgatgacacttctgggttac aatgaaatgatcttctggtctaaagtcctgggtatacattcgtcgagttacgttgtccgg tatagtccaagtacaatgaagccaaacccgagtgatgataacagcagtataaacattgat attgtcaggaaaggtggtaccatattattctgtgattacgtgtgcgagaatctcagtgat gcagaacctcttacgtggttgctggtcaatcacatcgaggaaaccataaatttggctact gagtcacccgttagagaattagtagcagctgctgtacatagaaatccagcagctagtggc ctcctggtgcaggctattgcagcaaaatgcttagatctgtcgaaaccaagtttcgtaaaa aagttgttactttgcgtcgaaggcgcacataattctcaaagtggaccattaatattggca ctggtaccaagactgttggcttccaaacatttagcgttatctagaatggctgctaaaata gcaagtcgtaaggcggaaacattgttgacactcagcatggatgaggctaatgaacaatta ccgaaagaagatcttatcaaaactatggacattttacagtctactaaattagcgaaaaaa catagcagtcttgttatcttattgaataagcttggtgccaagcattatgatctgtcacct ttagaattggaacaatgtcgaccattcaatccatcgaccatcagaagtatcaaattagat aaaaattggtttttcacgcaaaccaaatatcgttgctgtcatccaagcattaattatggt tcatatgaatcagctcagttattaagtaacctagattttgatgatattattgacattatt acgtgcagggagttcagtgtcaagatcttgaaagaatgcattaaattaggtgtaaggaaa acgctcgagacatgtcaggatttggaacttggtcaagatgtgaaggaagaaagttttgaa ttcaaagaaaatcctctgtacactgctgccaagcaatgtctactacagcacgtgcaatat attgtggagatgatgccaaaacctcatcatgcttacaatccacttaatcgtgattcaagt ggaaaggaagggaagcacgcaaaaaattcatatatgtctagatttacagaattgctaaca gattctgaatactgggattttttattcatgatagtaccatcagtgataacgtatatgcgt acactgtctaagttgtcaaaattcaacctatgcgaaatcgacgttaagtatgaagaacac ctagctaagtttgccctactctgtttcgacgtatctcattggataattcataatcatgag aatgataacaaaaagatgaagcctcatgagctgcatttgacgatgaactgcgctgaagaa atcttgaggcaaccttgcttgactaaagtattcggttccagtacacattactcgtgggtt tgttcagcagctgctaccctgacaagaatcgttgagcatctattaacaattatcaatcct ttaccggtgataaatacttctggattacaggctgcgttagatagcgacgaaaccagacca tatgctgaagcgtgtaaacaaatggctacattagttgcgtggctagaagagtgccaaatg gaaaactcccctgaaaacattccaccatttttattcaattgtatcaaaaatttaatcata agcattagcaggcaacctctggtcaattcttttgtactgacgcctccattggcctggaag caaggatggcgacctagtacttccagtgctactaagtgtcgcgtaccattgttgtcctct gagtcgaatttcttacaagagattgatattctggaacaatttatataccgggtgacctta ttgggttggacatcgcgattgcagtttgaagaaatgtggatggcgtttctgagtgtactg aatgttgcaccgaacaaaaatatgccccaggaggaaattgctaatttgagtcgtgctact agtctagctgtacaggctattacgagactcctaatgcagactctacttctgccacatcct ggaaatcctggcaccagcacccctattcatcattcacgagatccgcaactctcattgtat aaaattagctcccggaaactctttattatacaggataccctactgtggaaatatgagtgt atgaatgactcaagaaacgttcatggattgaaattagagcatattttctcgcgaggaaat atcgaacgtgttggcaattcccatgcgtttacatatagtcagttatctgttccttacttg tgggcttcgtgttatctacatgaagataaattgagttctagtgtattgacattgaaaaac agaagaaacgacgccctgatgtctatgtctctggacttgaattcctgtcttcgattttta atagaattatattcttcgtggatattaccacaatccaacacacctctacgactgctgaat gaggtcatcaaatcaattttatccatttccgagttatttgttgaaagagggcagtaccaa tggatgctggatacttgtttagagatttcaaggacacacccagtggaaaatgaaatatta catcagtacattgttatcgcagcttgtaaagctgcagctgttttaacaccactggatgtt gaaaccttagagaaagtaaagcgattggtcgacattaatttaaagtcggactttttacca gccggagtatctgcgctacatggaactctctatttactacaaagtgcagtgctggccgat tgtgaggaaactatgaatatgatacacccactagctatagaatatattcaaaagcatatc gatacacaagactcaaatggagtgttaagtcaaagtgaagaacaccaaggaatcatgtgg gctttggtatttttcttgttggaacatgctgatgatactccaccagattcggaagctcct gcagtgttagaacttgttctttccttagtaacaacgaagaatatatcgattgctctccat caaacacttctacatggattggaaaggctcgttaccacgaaaagcgttgtagggaaggtc acagagcaaatagtcaaagtagcaattgatcgtttgagacaagcaaatcccatgctggct ctgcctgccttgcaactgttgttaacgtgtatgtatactgaggcagccgatcgattgaat caaccggatgtggaggaacctctacctgatgctgaaccagaagcacttatacgatctatt gagaggacttcgggaatctttgatcgaataaagagaggatatccaatggaggttgaaata ttgtgtgcagttttgtctggggttctgggtgatttctttccaccgtccgaaattttgact agggttattggagaatttctttcaccacaacaaccgcatcctaggttgttatctgctgtt gtttttcaggtttgccagagggcatgtaatggtcctcaattgggtttgcttcaagactgg gtactttttagtttacccaattttattcaaagcttaccagttgctatgtcgacttggtgt ttatcgtgtttctttataagcgcttcgaccaatcagtggttaagagccttatttcctcac gttcaatccagaattggcaaatatgaatatgaagataagaagatattatgcattgctgca gcggacttctatcaccagctttccaacgagagtcaaaggaaagcctttgtggaaactttc gagacggctgccaagagacctgatacaccgttcagttacattttagcatctttctaa

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