Cephus cinctus (wheat stem sawfly): 107268708
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Entry
107268708 CDS
T07523
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
ccin
Cephus cinctus (wheat stem sawfly)
Pathway
ccin03020
RNA polymerase
ccin03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccin00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
107268708
09124 Replication and repair
03420 Nucleotide excision repair
107268708
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccin03021
]
107268708
03400 DNA repair and recombination proteins [BR:
ccin03400
]
107268708
Enzymes [BR:
ccin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
107268708
Transcription machinery [BR:
ccin03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
107268708
DNA repair and recombination proteins [BR:
ccin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
107268708
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
107268708
NCBI-ProteinID:
XP_015597233
UniProt:
A0AAJ7BY22
LinkDB
All DBs
Position
Unknown
AA seq
1175 aa
AA seq
DB search
MYALEDDQYDDEDAEEISSKLWQEACWIVINAYFDEKGLVRQQLDSFDEFIEMSVQRIVE
DSPQIDLQAEAQHTSGEIENPVRHLLKFEQIYLSKPTHWEKDGAPSPMMPNEARLRNLTY
SAPLYVDITKTILKDAEDPIETQHQKTFIGKIPIMLRSKYCLLAGLSDRDLTELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFSMKDGKYAYKAEIRSCLEHSSRPTSTLWINMM
AKSGASIKKSAIGQRIIAILPYIKQEIPIMIVFRALGFVADRDILEHIIYDFDDPEMMEM
VKPSLDEAFVIQEQNVALNFIGTRGARPGVTKEKRIKYAREILQKEMLPHVGISDFCETK
KAYFLGYMVHRLLSASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRMYAQ
KFIDRGKDFNLELAIKTKIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMLCPAETPEGAAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEIAPSAIADATKIFVNGCWVGIHRDPDQLMATLRKLRRQMDIIVSE
VSMIRDIRDREIRIYTDAGRISRPLLIVENQKLLLKKRHIDMLKERDYNNDGWQELVGSG
VVEYIDTLEEETVMIAMSPEDLRQEKEYAYCTTYTHCEIHPAMILGVCASIIPFPDHNQS
PRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPHKPLVTTRSMEYLRFRELPAGINSI
VAILCYTGYNQEDSVILNASAVERGFFRSVFYRSYKDSESKKIGDQEEQFEKPTRQTCQG
MRNAIYDKLDDDGIIAPGIRVSGDDVVIGKTITLPETDDELDSTTKRFTKRDASTFLRNS
ETGIVDQVMLTLNSEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFSCE
GLTPDIIINPHAIPSRMTIGHLIECIQGKVSANKGEIGDATPFNDAVNVQKISTLLQEYG
YQLRGNEVMYNGHTGRKINAQVFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGRA
RDGGLRFGEMERDCQISHGAAQFLRERLFEVSDPYRIHICNFCGLIAIANLRNNTFECKG
CKNKTQISQIRLPYAAKLLFQELMAMNIAPRLMVT
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgtatgctctcgaagatgatcaatatgatgatgaagatgcagaggaaatttcatcaaaa
ttgtggcaagaggcttgttggatcgtcattaatgcctattttgatgagaaaggtcttgta
cgacaacagcttgacagttttgatgaatttattgaaatgtcagttcaaaggattgtggaa
gattcaccacaaattgatttacaagcagaagctcagcatacatctggagagatagaaaat
cctgtgagacatttgttaaaattcgagcagatctatttatctaagcccacacattgggaa
aaagatggtgcaccttcacctatgatgcccaatgaggccagacttaggaatttaacatat
tctgcacctttgtatgtagatatcacaaaaactatattaaaagatgcagaagatcctatt
gaaacgcagcatcaaaaaacatttattgggaaaattccaattatgttacgatcaaaatat
tgtttacttgctggtttatctgatcgtgatttgactgaattgaatgaatgtcctcttgat
cctggtggctattttattattaatggctcagaaaaggttcttattgcacaagaaaaaatg
gcgacaaatacagtttatgtattcagcatgaaggatggaaaatatgcatacaaagctgaa
atccgttcatgtttagaacacagttcaagaccaacatccacgctgtggattaatatgatg
gcaaagagtggtgccagtataaagaagtcagcaatcggtcaacgtattattgccattctt
ccatacatcaaacaagagatcccaatcatgattgtgtttcgagctctgggatttgtagct
gatcgcgatatcctcgagcatattatctacgatttcgatgatcctgaaatgatggaaatg
gttaagccgtctttagacgaagcgttcgttattcaagagcaaaacgttgccctaaatttc
attggtactcgaggtgctcgacctggagtaacaaaggagaaacgtataaagtacgcgagg
gaaattttgcagaaagaaatgttaccgcatgtcggaataagtgatttctgcgaaacaaag
aaggcgtatttcctcggttatatggtgcacaggctgctttcagcctccttgggcagaaga
gaattggatgatcgtgatcattacggaaacaaacgtttagatctcgctggtcccttatta
gcattcttattcaggggattatttaagaatttaatgaaggaggttcgaatgtatgcacag
aaatttattgatcgtgggaaagatttcaatttggagttggccatcaagaccaagattatc
actgatggcttaagatactctttagctactggtaactggggtgatcagaaaaaagctcat
caagctagagctggtgtatctcaggtattaaacaggttaactttcgcctccacgttatct
cacttacgtcgtgtcaattcaccaattggtcgtgatggaaaattggccaagcctcgtcag
ctgcacaacactttatggggaatgttatgtcctgccgaaacacctgaaggggctgctgta
ggtcttgtgaaaaatcttgcccttatggcgtacatcagtgtcggttcacagccttcacct
atattggaattcttagaagaatggtccatggagaatttagaagaaatagcaccaagcgcg
attgctgacgcaacaaagatattcgtgaatggctgctgggttggcatccatagagatcct
gatcaattaatggctacgcttaggaaactacgaaggcagatggacatcatcgtttctgaa
gtgtcgatgattagagacatccgtgacagggaaatcaggatatacactgatgctggaaga
atcagtaggcccttattaattgtagagaatcagaagttacttctcaagaaacgacacata
gacatgctcaaggaaagagactacaataatgatggctggcaagagttggtaggcagtggg
gtggtcgaatatattgatactttagaagaagagactgtcatgatcgctatgtctcccgaa
gatctaagacaagagaaagaatatgcttactgtactacatacacccactgtgagattcat
cctgctatgattttgggagtctgcgcttctatcattccattccctgatcacaatcagagt
cctaggaatacataccagagtgctatgggtaaacaagctatgggcgtttacattacgaac
tttcacgtacggatggacactttagctcacgttttatattatcctcacaaaccactggtt
accaccagatcaatggagtatcttaggttccgagaattaccagctggtataaacagtatt
gtggccattttatgttataccggatataatcaggaggacagtgtcattctaaatgccagt
gccgttgagagaggtttcttcagatctgtattttaccgttcttacaaagattctgagtca
aagaaaattggagatcaggaagagcaattcgagaagccaacaagacaaacatgtcaggga
atgcgtaatgccatttacgataaattggatgacgatggaataatcgctcctggaattcgt
gtatctggagatgacgtagtgattggaaagactattactcttccggaaactgatgacgaa
ttggacagtacaacgaaacgattcaccaaacgagatgcctccacgtttttgcgtaacagc
gaaactggcattgtcgatcaagttatgttaacgttgaatagcgaaggatacaagttttgc
aaaattcgcgtgcgcagtgttcgcataccacaaattggcgacaaatttgcttcgcgacat
ggacaaaagggtacttgtggtatacaatacagacaagaagacatgccattttcttgtgaa
ggtcttacacccgatattattattaatcctcatgctattccatctcgtatgacaatcggt
cacttgatcgaatgcattcaaggaaaagtttcagccaacaaaggggaaattggtgatgcg
actcccttcaatgatgctgtcaacgtgcaaaagatttcaacacttttacaagagtatggc
tatcagttaagaggaaacgaggttatgtacaatggtcatactggacgtaagattaatgct
caagttttcttgggaccaacttattatcaacgtttgaagcatatggtggacgataaaatt
cacagtagagctcgtggacctgtgcaaattttagtaagacaacctatggagggtagggca
agagatggaggtttacgttttggcgagatggaacgcgactgtcaaatctcgcacggagct
gctcaattccttagggaaagactgttcgaggtttctgatccttatagaattcacatttgt
aatttttgcgggcttatagctattgcaaatttaagaaataacacatttgaatgtaaaggt
tgtaagaacaaaacacaaatctcgcaaattaggttaccgtatgcagcaaaactgctgttc
caagaattaatggcaatgaatattgcaccgcgactcatggtaacataa
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integrated database retrieval system
