Cephus cinctus (wheat stem sawfly): 107268873
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Entry
107268873 CDS
T07523
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
ccin
Cephus cinctus (wheat stem sawfly)
Pathway
ccin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107268873
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccin03041
]
107268873
Spliceosome [BR:
ccin03041
]
Complex A
U1 snRNP components
U1 related factors
107268873
Complex B
107268873
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
RhoGAP-FF1
HVO_2833_C
Motif
Other DBs
NCBI-GeneID:
107268873
NCBI-ProteinID:
XP_015597567
UniProt:
A0AAJ7BYQ2
LinkDB
All DBs
Position
Unknown
AA seq
853 aa
AA seq
DB search
MASSDSVAPPGAGPGAVPGAVPSAVPGTVPGFPPAAPNMASSFVPPMMPGTPFIPPPGLP
PGPPGMMPPQFSIPPPGFGFPMGAAPPPEAGVIAAPPQITAPSIPPPAPTPSETGSITPT
SSTEKKTDWSEHKAPDGRTYYYNSSTKQSLWEKPDDLKTPSELLLSQCPWKEYKSENGKV
YYHNVTTKESRWTIPPELEELKSRIAAEEAAAAAAAAVASATNTGITPGTMQHMSPNVVT
IFQVSTPEPGGKSAIEQAMAATLAAINIPTPPSKPDDDSNSAKGSANGSRTSTPEPKMQF
KDKKEAIEAFKELLKERDVPSNATWEQAVKMIQNDPRYPQMKKLNERKQAFNAYKTQKLK
EEREQERLRLKKAKEDLEQFLLENERMTSTTKYYKCEEMYGTLELWRAVGDSDRRDIYED
VIFNLAKREKEEAKLLKKRNTKRLAQVLDTMTDVTYRTTWQEAQALLLQHSSFAEDADLL
EMDKEDALLVFENHIRQLEKDEEEEKEREKKRRKRQERKNRDGFISLLDELHEQGKLTSM
SLWVELYPMLSADLRFSAMLGQAGSTPLDLFKFYVEDLKSRFHDEKKIIREILKDKNFEV
QVNTTFEEFATVVCEDRKSATLDAGNVKLTYNLLLEKAEAREKERVKEETRKFKKLETGF
KNLLKTLDVDYQMNWEDARAKIEEEPDFKAITLESERVRIFKEYQHELEESCSHHHIRSK
KKKTKKTKRRSRSRSHSQESEGSDKGVKKKRHKSRSASPGPSKSDSSESDCRKSKRKKSK
KKRGRSHSRSHSRLPSSEDSPERKRKEEKHRRPSAHSEGSVTEAVEHHELSEDELEKQRA
QLLRELQMQQEEN
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaagtgatagtgttgcaccaccaggcgcaggacctggtgcagtacctggtgca
gtccctagtgcagtgcctggtacagtaccaggatttccaccagcagcacctaatatggca
tcaagttttgtgccaccgatgatgcctggaacaccttttattccaccaccaggattgcca
ccaggtcctccaggaatgatgccaccacaattctctattcctccaccagggtttggattt
cctatgggtgcagcaccacctccggaagctggtgttatagcagcaccacctcaaatcaca
gctcctagtataccaccacctgccccaactccatcagaaacagggtcaatcacaccaaca
tcatcaaccgaaaaaaagacggactggtctgagcacaaggctccagatggtcgaacttat
tattacaacagtagtacaaaacagtctctctgggagaagcctgatgatttaaagactcct
agtgaactgcttctatcacaatgcccatggaaggagtataaatctgagaatggcaaagta
tactatcataatgtgactactaaggaatcacgatggacaattccaccagaattagaggaa
ttaaaatcgaggattgcagcagaggaagctgcagcagctgctgcagctgcagttgctagt
gcaacgaatacaggcataacgccaggaacaatgcagcatatgtcgccaaacgtagtaaca
atctttcaggtaagtacaccagaacctggagggaaatctgcgatagaacaagctatggct
gctacattagctgcaataaacattcccacgcctccttcaaaacccgatgatgatagtaat
tcggcaaaaggttcagcaaacggtagcaggacaagcacacccgagcctaaaatgcagttt
aaagataaaaaagaagcaatagaagctttcaaagaactgctcaaggaacgcgatgtaccc
tcaaatgcaacctgggagcaggctgtcaaaatgatacagaacgaccctcgttatccacaa
atgaaaaaattgaatgaacgcaagcaagcattcaatgcatacaagactcaaaagttaaaa
gaagaacgtgagcaagagagactccggttgaagaaggcgaaagaggacctagagcagttt
ctcctagaaaatgagagaatgaccagtacgacgaaatattataagtgcgaggagatgtac
ggcaccctggaactctggcgtgctgtgggtgattccgatagacgtgatatttacgaggac
gtaatatttaacctagccaaacgagaaaaggaggaagccaaacttctgaaaaagagaaat
acgaaacgtctagcccaagttcttgatactatgacagatgtcacttacagaacaacatgg
caagaggctcaggctttactcttgcaacactcatcctttgcagaagatgctgatctatta
gagatggacaaagaagacgcgttgctcgtcttcgaaaatcatattaggcaattggaaaag
gatgaagaagaagaaaaagaacgggaaaagaaacgcaggaaacgacaagagagaaagaat
cgtgatggtttcataagtcttctcgatgaactacatgaacagggcaaactgacatcaatg
tccttatgggtagaactttacccaatgctatcagctgatcttaggttctcagcaatgctt
ggtcaagctggctcaactccattggatctttttaagttttatgtggaagacctgaagtct
cgcttccacgacgagaaaaagataattcgtgagattctgaaagataagaacttcgaggtt
caagtcaatacaacatttgaagagtttgccacagtggtatgtgaggacaggaagtctgct
accctggatgctggaaatgtcaagctcacctacaatctactcctggaaaaagctgaggcg
cgcgagaaggagcgtgtcaaagaagagaccagaaagtttaagaagcttgaaactggcttt
aaaaatctcctgaagaccttggatgtggattatcagatgaactgggaagatgcccgcgcg
aagatcgaagaggaaccagacttcaaggctatcacgttggagagtgaacgggtcagaatc
ttcaaggagtatcagcatgagctggaagagagctgcagtcatcatcatataagaagtaag
aagaagaagacaaagaagaccaaaagaagatcgcgttcaagatctcacagtcaagaatcc
gagggaagtgacaagggtgtcaaaaagaaacgtcataagtccaggtcagctagtcctgga
ccaagtaaatcggacagttcggaatcagattgtagaaaatcaaagagaaagaagagcaag
aagaaacgtggtcgcagccattctcgctcacactccagactaccatcatcagaagactct
ccagagcgaaaaagaaaagaggaaaaacacagaagaccctcagctcacagcgaaggttca
gtcacagaagcagtggagcatcatgagctgtcagaggacgaattggaaaagcaaagggca
cagcttcttcgagagctgcaaatgcaacaagaagaaaattga
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