Cephus cinctus (wheat stem sawfly): 107268930
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Entry
107268930 CDS
T07523
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
ccin
Cephus cinctus (wheat stem sawfly)
Brite
KEGG Orthology (KO) [BR:
ccin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccin03009
]
107268930
Enzymes [BR:
ccin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107268930
Ribosome biogenesis [BR:
ccin03009
]
Eukaryotic type
Pre-60S particles
Helicases
107268930
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
107268930
NCBI-ProteinID:
XP_015597691
UniProt:
A0AAJ7BYN9
LinkDB
All DBs
Position
Unknown
AA seq
550 aa
AA seq
DB search
MQSDEEEVEEKPINFHELELDDRILKAIAKMGWLEPTLIQEKTIPLLLEGKDVLIRARTG
SGKTAAFAIPVIQKILTGKQTQSKQEVKGLILAPSKELCKQIHEVLISLTIKCSREVKSL
DISPQVDLSVQKPLLAEKPDIIVATPGRALQHMKAGNIKLKRSLETLVIDEADLIFSFGY
EEEIKNVLPFLPIVYQAALASATLSEEVLTLKKLVLHNPAILKLEEPPLAPPSQLAHYTL
TAEENDKAAILYALLKLHLIRGKSIIFVNTVDRCYKLKLFLEQFGIPTCVLNSELPAVSR
CRAVTQFNSGTYDIIIASDEKALEEPHVVKQKKSKRRKDKESGVARGIDFQFVSNVINFD
FPLDVNSYVHRAGRTARGKNQGTALSFIAMRERVLMDEVENELKQSYGRETLFRTYQFKL
EEVEGFRYRAKDAWKAVTRIAVREARLKEIKQEVLNCEKLKGYFEDNPRDFQSLRQDKAL
HTVRQQPHLKDVPEYIVPASLKRLAGIGKRKRKFNREAASAGTSGAKLKQQARMSNPLIS
LSIPKKNKIK
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcggacgaggaggaagttgaagaaaaaccaataaattttcatgaattggaattg
gatgatcgaatcctgaaggctattgccaaaatgggctggttggaacccactcttattcaa
gagaagacaataccattacttctcgaaggaaaggatgttcttataagagcaagaactgga
tcaggcaagactgcagcttttgctattccagttatacagaaaattctgactggaaaacaa
acacagtctaaacaggaagtaaagggcttaattttggcaccaagcaaagaactttgtaaa
caaattcatgaggttctgattagcttaacaatcaaatgttcacgagaagtgaaaagtttg
gacataagtccacaggttgatctcagcgtgcaaaaacctcttcttgctgaaaagcctgat
ataattgttgctacaccaggtagagcgttgcagcatatgaaagcgggaaatattaaatta
aaaagatctctggaaacacttgttatagatgaagctgatttgattttctcctttggatat
gaagaagaaataaaaaatgttcttccatttctaccaattgtttatcaagcagcgcttgct
tcagcaactctttccgaagaagttttaaccttgaaaaaactagttctacacaatccagct
atcttaaaactggaagagcctccattagctcccccttcacagcttgcccattatacacta
actgctgaagagaacgacaaagctgctatcttatatgcacttctaaagttacatttaatc
aggggaaagagcataatatttgttaatactgtagacaggtgttataagctcaaattattc
ctggagcaattcggcattcctacttgtgttcttaattctgaattacctgctgtctcaaga
tgtagagccgtaacacagtttaacagcggaacttacgacataattatagcatctgatgag
aaagctttggaggagccccatgtggtcaagcaaaaaaagtcaaagcgcaggaaagataaa
gaatcaggcgtagcacgtggaatagatttccaatttgtatccaacgttataaattttgac
tttcctcttgatgtgaattcgtacgttcatcgcgctggcagaacagcacgtggaaaaaat
caaggaacagctttgagtttcatagcaatgagagaaagggtattgatggacgaggtggag
aatgaattaaaacaaagttatggaagggagacattgttcagaacttatcaatttaaattg
gaagaagttgaaggattccggtatcgagcaaaagatgcttggaaagctgtgactaggata
gctgtacgagaagctagactgaaggaaattaaacaggaggttcttaattgtgaaaaattg
aagggttacttcgaagacaatccaagggattttcaatcccttcgacaagacaaggctctc
catactgtgagacagcagcctcatcttaaagatgtaccggaatacattgtaccagcttca
ttgaagagattagcaggtattggaaagcggaaacggaaatttaacagagaagctgcatca
gcaggaacaagtggagcgaaattaaaacagcaggctagaatgtccaatcctttgataagt
ctcagtataccaaaaaaaaataaaataaaataa
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