Cephus cinctus (wheat stem sawfly): 107269347
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Entry
107269347 CDS
T07523
Name
(RefSeq) protein CASC3 isoform X1
KO
K14323
protein CASC3
Organism
ccin
Cephus cinctus (wheat stem sawfly)
Pathway
ccin03013
Nucleocytoplasmic transport
ccin03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccin00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107269347
03015 mRNA surveillance pathway
107269347
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccin03019
]
107269347
Messenger RNA biogenesis [BR:
ccin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
107269347
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
107269347
NCBI-ProteinID:
XP_015598570
UniProt:
A0AAJ7C034
LinkDB
All DBs
Position
Unknown
AA seq
807 aa
AA seq
DB search
MSDTRRRRKSHHSGASDDLSDSYDELNATKETQSSEQTEAQHDSEYDTAGSDTDTESQDG
ALRESGDGQEEDKPQRKLDDDEDRRNPQYIPKRGTFYEHDDRTADEVTDTAVEPPSERET
KEKKVWKDKEDRWNHDRYNDEEQAPKSHEELIAVYGYDIRNEEGPPRARRRRRYGRGPNK
YTRNWEDEDAYGKTAGTVTPAKGGGRKSRGGEEFPALGANNSKDSSQNSPVGTEEPVITS
AWYSNKNKSQSKVQDFPPLQSQSDNHKTKPSGTANLQHTNENRAPNEPTNPAWKKEPKNS
TQNQSPNRNSGGGDADKSLHSKASPRDVNKRHVQESVSLVASRVRGRGFKANANNNAVTN
RTMETKPKGRGAGPISAENRRNNTGGQHDDDQQLVNNMKHMNVNDGAGFHQGGRQNKNYY
SNSSGQQRPSTVPPRMQQQSHQQQQQSHQQQQDASGNRPKRYSSLRQRPAIPEGPGQPGY
QPQHGQHGYYPPQGGNTRAVLESSGYPQGPFEQTPPVPAPAAPMAAQPVIPLPPGGQAAN
YAPPAFLVPSPQFMPPQSAPPSIINYVSGPNGPTFQPNYQGYQGYNPTVQPPGPPPPQEL
FQPQGCTYYSPAQQQQQQQQAAPIRRPKAAIPILPPPDNQQHQINRGRGRIIQQQQQYHS
NLEPGNVQHTEAEGKVEILEGDQAVVPGQFDNAQGDQLEFNQQYEKIETPELVTSDAVNE
ESACAIPDEVEKIDVPCNDDDAVQDENKKVRLPTISTTNDDPPSDVTDNNETISTKSVES
EMAKPEAELCITENKLLESSVIEEAAA
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatacgcgtcgccgtcgaaaatcgcatcattccggtgcatcggacgatctctcg
gactcctatgacgagttaaatgccacgaaggagacgcagagcagtgaacaaactgaggct
caacacgattccgaatatgacacagctggcagtgatacagatacagaatcacaggatggt
gccctacgtgaaagcggagatggtcaggaggaagataagcctcagcgtaaactggatgat
gatgaggatagacgtaatccgcagtatataccaaaacgcggtaccttctatgaacatgat
gatagaacagcagatgaggtgacggacacagctgttgaaccacctagtgaacgagaaaca
aaagagaagaaagtgtggaaggacaaagaggatagatggaatcacgatagatataatgat
gaggaacaggcaccaaagagccatgaagaacttatagcagtgtatggatatgatattcga
aatgaagaaggtccacctagagcacgtaggagaagaagatatggacgagggccaaacaag
tatacacgtaattgggaagatgaagatgcttatgggaagacagcaggtaccgtcactcct
gctaaaggaggaggcagaaagtcgagaggtggtgaagaattccctgcactgggtgccaat
aatagtaaagattcttctcagaattctccagtaggaacggaggagccagtgataacctcc
gcctggtatagcaataagaacaaatctcagagcaaagttcaggatttcccgccgttgcaa
tctcaatccgataatcacaaaacgaagccaagtggaacggctaatctccagcatacgaac
gagaatcgagctccaaacgagccaacaaatcctgcctggaaaaaagagccaaaaaactcg
actcagaatcaaagtcctaaccgaaattccggtggtggcgacgccgataaatctttgcat
tctaaggcatcgcctcgtgacgtcaataaacgacacgtccaggagtcagtaagtctagtc
gcgagcagagttcgcggtcgaggctttaaggctaacgctaacaacaatgcagtcactaat
agaacaatggaaacgaagccgaaaggacgtggtgctggtcctatctctgcagagaataga
aggaataatactggtggtcagcatgatgatgatcagcagctcgtcaataatatgaaacat
atgaacgtcaatgatggagctggtttccaccagggcggaaggcaaaacaaaaattattat
tcaaattcttccggacagcagaggcccagtacagttcctccacgtatgcaacagcaatcg
caccaacaacagcagcaatctcatcagcagcaacaagatgcttccgggaacaggccaaaa
cggtattccagcttgcgtcagagacctgctataccagaaggacctggacaacctggatat
caacctcagcatggtcaacatggatactaccctccgcaaggcggaaatacgagagctgtc
ctagaatcatcaggttatcctcaaggtccatttgaacaaactccacctgtaccagcaccg
gctgcaccgatggctgcccaacctgtaattccattgcctccaggaggtcaagcagcaaac
tatgcacccccagctttcctggtgccatcgcctcagttcatgccacctcagtcagcgcca
cctagcataatcaattatgtatcgggtcctaacggtccgacattccaacctaattaccaa
ggatatcaaggctataacccaacggtccaaccaccaggaccaccaccacctcaggaactg
ttccaaccccaaggttgtacctactacagtcctgctcagcaacagcaacaacaacagcag
gcagcaccaattagacggcccaaggcggcaatacctattctaccaccccccgataatcaa
caacaccaaatcaacagaggacgaggtcgtatcattcaacagcagcaacaatatcacagt
aatctagaaccgggtaatgttcaacacactgaggctgaaggtaaggtcgaaattttggaa
ggtgatcaggcggttgtacccgggcaattcgataacgcacagggagatcaattggagttt
aatcagcaatacgagaagattgaaacgccagaattagtgacgtccgatgcggtgaacgaa
gaaagtgcatgcgcgatccctgatgaagttgaaaagattgatgtaccatgcaacgacgac
gatgcggttcaagacgaaaataagaaggttagattacctacaatatccactacgaatgat
gatccgcccagtgacgtcactgataataatgagactatttcaaccaagtcagtggagtca
gagatggctaaacccgaggctgagttatgcataactgaaaacaagctactcgagagctcc
gtgatcgaggaagcagctgcctaa
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