Cephus cinctus (wheat stem sawfly): 107270019
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Entry
107270019 CDS
T07523
Name
(RefSeq) probable ATP-dependent RNA helicase kurz
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
ccin
Cephus cinctus (wheat stem sawfly)
Brite
KEGG Orthology (KO) [BR:
ccin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccin03009
]
107270019
Enzymes [BR:
ccin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107270019
Ribosome biogenesis [BR:
ccin03009
]
Eukaryotic type
90S particles
Helicases
107270019
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHX37_C
OB_NTP_bind
HA2_C
Helicase_C
DEAD
AAA_19
AAA_22
nSTAND3
ATPase
WHD_HA2
nSTAND_NTPase5
ResIII
SIP
T2SSE
AAA_16
Flavi_DEAD
AAA_23
AAA_29
Motif
Other DBs
NCBI-GeneID:
107270019
NCBI-ProteinID:
XP_015600106
UniProt:
A0AAJ7RLP6
LinkDB
All DBs
Position
Unknown
AA seq
1199 aa
AA seq
DB search
MGKKGYNWKARRVPEVEIDDSSTKKISLDIEHRNESYDNCNALVLPNEKRKTKNKDKKVT
VTRLLSKKRRKQLEKVVERKEKKLQRATLLEELAKVQVPADELKQYVSLTAVQTKGLKRH
FRETEAYKTNLDIVKDDDGEIVVNAIKGSKKQRLALLYSDKKKDASVDPNIVGLNESSES
DDSESSEDIEDIDSKSNDSSNKDANINEDGVNKTDKEKSPEIVQIGKTNNNKNDNGQSCE
IIREPPKVTKAPEKSVILIQDRKPAVFVPLNRKSEIQEARLKLPVLAEEQGIVEAINDNP
VVLITGETGSGKTTQVPQFLYEAGYAKNKMIGITEPRRVAAMSMSCRVREEMNLTAKEVS
YLIRFEGNVTPDTKVKFMTDGVLLKEIQSDFLLSKYSVIILDEAHERSVYTDILIGLLSR
IVPLRTKRKDPLKLIIMSATLRVEDFVENPKLFKIKPPVINVESRQFPVTIHFNRRTSQD
YVNEALRKAVKIHTQLPEGGILIFLTGQREVNSVVRRLRKAFPYRNRKWINGNKSDKIKE
EKQEKTEEEEEAVEKDTEKDSDEEMEAKEALRYLKQKRKKEPILLPKVNLDNYSVVPTDD
THEDLIDAGDDDEDDENLNDEDEDDEDILKLSSLTTSQPLWVLPLYSLLPSKKQARVFEP
PPEGCRLCVVSTNVAETSLTIPNVKYVVDSGRCKSRLYDKVTGVTTFRVCYTSKAAANQR
AGRAGRTGPGHCYKLYSSAVFNDQFEQFGVPEIQRKPVDDLLLQMKVMNIDKVVNFPFPS
SPDILQLKSAERRLCILGALEQPVPSKEDAYCAKVTSLGHSIAAFPVAPRYGKMLALSQQ
HDLLRYTVCLVAALSVQEVLVEAVSTEGSTKTKWLQTRRRWAGMGNSLLLGDLMVLIRAV
GAAEFAGSRGKLLNFCEEHGLRHKAITEVRKLRQQLTNEIILNLPDLQLIVDPEMPPPTE
IEAKLLRQIVLAGMGDQVAHKLSPDEVEDGEDKTKYKHAYKTLEMEDPVFMHSSSVLRKT
SPEWVVYQEVYETNKIYMRGVTAIEPEWLPKFAASLCKLSEPLTDPPPRYDNEMGKVMCR
MTGTFGKAGWELPAMELEYPASLDGIRWFARFLLEGAVCPKLRRFVLSLLSTPSSVNKSW
AKLLPRTETITKVLASKGVMSKDKLYEVWEEDSKFLLSAYQKWLPESAHSEVALLWPPL
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaaagggttacaattggaaagcacggcgagtgccagaagttgagattgacgat
tcttctacaaagaagatatcacttgatattgagcaccgcaatgagagttatgataattgt
aatgctttggttttacccaatgaaaaaaggaagactaaaaacaaggataaaaaagttact
gtaactcgtttactatctaagaaacgtaggaaacaattagagaaagttgttgagcgaaag
gaaaagaagcttcagagggcaacgcttttggaagaacttgcaaaggttcaagttcctgcc
gatgaattaaagcagtatgtgtcattgacggctgtacagacaaaaggtttaaagcgtcac
tttcgtgaaactgaggcctataagacaaacttggatattgtgaaagacgatgatggtgaa
attgtcgtaaatgctattaaaggaagtaagaaacagcgattggctctgctgtattcagat
aagaaaaaggatgccagtgtagatccgaatatagtagggttaaatgagtcaagtgaaagc
gatgattcagagagcagtgaggatattgaggacatcgacagtaaaagcaatgatagtagc
aataaggatgccaacatcaatgaagatggagttaataaaactgacaaagaaaaaagtcct
gaaattgtgcagattgggaaaacaaataataacaaaaatgataatgggcaatcttgtgaa
attatcagggaacctccgaaagtcactaaagctccagaaaaatctgtgattttaatccaa
gatcgaaaacctgcggtgtttgtaccactgaatcgtaagtctgagattcaagaagcaaga
ttgaagcttcctgtcttagccgaagagcaaggaattgtcgaagccattaacgataatcca
gtagtactaattactggggaaacaggaagcggtaaaacaacccaagtaccacaattcctc
tatgaagctggttatgccaagaataagatgattggtataacagagcccagaagagtagca
gccatgtccatgagttgccgcgtacgcgaagaaatgaatttaacagccaaagaagtatct
tatcttattcgttttgaaggaaatgtcacaccagatacaaaagtcaagtttatgaccgat
ggtgttcttttgaaggaaatacagagtgatttcttactatcaaagtattctgtaattata
ttggatgaagcgcacgaacgcagcgtctatacggatatattaattgggctgctgtcgcgt
atcgtaccattgcgtacaaagaggaaggatcctttaaaactcataataatgtcagctaca
ctacgtgtagaagattttgtggaaaatccaaaactctttaaaattaaacctccagttata
aatgtggaatcacgccagttccccgtaacaattcatttcaataggaggaccagtcaggat
tatgtaaacgaggctttacgtaaagctgttaagatacacactcaactaccggaaggtggc
attctcatattccttacaggtcaacgtgaagtgaactcggtagttcgcagattgcgaaaa
gcatttccttacaggaatagaaaatggattaatggaaataaatctgataaaattaaggaa
gagaaacaggagaagactgaagaagaagaagaagcagtagagaaggacaccgaaaaagat
tcggatgaagagatggaggctaaagaagcactgcgttacctaaaacaaaaaagaaaaaaa
gaacctatcctattgccaaaagtgaatttagacaactattccgtagtcccaaccgatgat
acgcatgaggatttaatagatgctggtgacgatgatgaagatgatgagaacttgaatgac
gaggacgaggacgacgaagacattttaaaattaagtagcttaactacttcacagccactt
tgggtgttaccactttattctttgttacctagtaaaaagcaagcacgggtatttgaacct
ccaccggaaggctgtcgcttgtgtgtagtatcaactaatgtggctgaaacatccttaaca
attcccaatgttaagtatgtggtagatagtggtcgttgtaaaagtcgactatacgacaaa
gtcactggagtaacaaccttccgggtttgttatactagcaaggcagcagctaatcaaaga
gccggaagagcaggaagaactggccctggtcattgctacaagttgtactcctcagcagta
ttcaacgatcagtttgaacaatttggtgtaccggaaatacaacgaaaaccagtagatgat
ttactgctacaaatgaaagtcatgaatattgacaaagttgttaattttccgtttccatcg
tcaccggatatattgcaattaaaatcagcagaaaggcgactgtgcattcttggtgctttg
gaacaacctgtaccttccaaggaagatgcctactgtgcaaaagtcacgagtcttggtcac
agtatagctgcgtttcccgtagcaccacgttatggaaagatgctggctctttctcagcaa
catgatctcttgagatatactgtgtgtctagtagcggcattgtcggtccaagaagtcttg
gtggaagctgtaagtacggaaggatcaaccaagacaaaatggttgcagactcgtcgtcgt
tgggccggaatgggcaacagtttactcctgggtgatcttatggtcctgatacgggctgtg
ggtgctgcagaatttgcaggatcgagagggaagcttttgaacttttgcgaggagcatggt
ttaagacacaaagccataactgaagtaagaaagttgaggcaacaacttactaatgaaata
atcttaaaccttccggatttacaactaatagttgatcctgaaatgcctccaccaaccgaa
atagaggctaaacttctacggcaaatagtattggccggaatgggagatcaggtagcacat
aaattatcaccagatgaagtggaagatggtgaagataagacaaaatacaagcacgcatat
aagacattggaaatggaagatcctgtatttatgcattcctcgagtgttctccgaaaaacc
agtcctgaatgggttgtgtatcaagaagtgtacgaaacaaataaaatttatatgcgtggt
gtcaccgctattgagccagaatggctaccaaaattcgcagcctctttgtgcaaacttagt
gaacctctgacagatccaccgccgaggtatgataatgaaatgggaaaagttatgtgtcgt
atgactggaacttttggcaaagcagggtgggaacttcctgctatggaattggagtatcct
gctagtcttgacggtatcagatggtttgctaggtttcttttggaaggtgcagtttgtcct
aaactacgacgtttcgtactatcgttattgtcaacgccaagcagcgtcaacaaatcatgg
gctaagttgttgccacgtacagaaactattactaaggttcttgcatcgaaaggagttatg
tcgaaggacaaattgtatgaagtctgggaagaggacagtaaatttcttctctctgcatat
cagaaatggttgccagaatctgcacacagtgaagtcgctcttctttggccaccattgtaa
DBGET
integrated database retrieval system
