Cephus cinctus (wheat stem sawfly): 107270054
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Entry
107270054 CDS
T07523
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10 isoform X1
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
ccin
Cephus cinctus (wheat stem sawfly)
Brite
KEGG Orthology (KO) [BR:
ccin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ccin03009
]
107270054
Enzymes [BR:
ccin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107270054
Ribosome biogenesis [BR:
ccin03009
]
Eukaryotic type
90S particles
Helicases
107270054
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Motif
Other DBs
NCBI-GeneID:
107270054
NCBI-ProteinID:
XP_015600172
UniProt:
A0AAJ7C262
LinkDB
All DBs
Position
Unknown
AA seq
811 aa
AA seq
DB search
MADKKDKKVKVYKKKKRVPEEKIIKDLQAQYDSIDEAKIKTFFNLPLSSKTQKGLKENEF
VEPTDIQKQSIGLALRGNDILGAAKTGSGKTLAFLIPVLEILYAKQWTRLDGVGALIITP
TRELAYQIYETLRKIGRYHDISAGLIIGGKDLQFEKKRMDQCNIVICTPGRLLQHMDENP
LFDCVNMQVLVLDEADRCLDMGFEQTMNAIIENLPPKRQTLLFSATQTKSVRDLARLSLK
DPIYVSVHEHSAHTTPEGLQQSYVVCNLEDKMAMLWSFIRNHLKQKVIIFFSSCKQVKYT
YEAFCRMRPGVSLLALYGSLHQLKRMSIYETFCKKQHAVLFATDIAARGLDFPAVNWVVQ
MDCPEDANAYIHRAGRTARFQRGGESLLVLLPRELEMIERLQERKIPINLIKINPNKLHS
PHRKLEALLARDVALKETAQRAFVAYVKSVFLMKDKKIFDVHSLNTDDYARSLGLAIPPR
IRFLQRMQKVTTKNEATKADKFVKMKQNDDDIKEQENSANSDGQSEEEQENFDRNEDKST
FHFGNRSSYYAACYSSNENYIKKSTFVFVDDSDDDNDILTVKRKNIQIEDAIDDASSVHS
EEMNLQSKQKKAVTKAAIAKKLLKKKIVPNKKITFDEDGQERIDPTKSKVSELARQYENE
EDSGINIEKAKEILREEDRFDKQRFKDKIKEKHREQKRKLKETKKKVESEEESEDEDAGV
ILGNGSGDESEAESNEPDLSWLPDPDKIYGKQENSNSDKSSNDSEELESIHSAPKRKLVT
QEEHKKSTKKKPKLTSDLQNDEELALQLLQS
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atggcagataaaaaagacaagaaagtaaaagtttataagaagaagaaacgtgtaccagaa
gagaaaatcattaaagatcttcaggcgcaatacgacagcatcgacgaggcaaagataaaa
acattctttaatctaccattgtcctcgaaaacgcaaaaaggtctgaaagaaaatgaattc
gtggaaccgaccgatatccagaaacagagtattggtttggcgctacgtggaaatgatatt
ctgggtgctgccaagacaggaagtggaaaaactttagcatttctgataccggttttggag
atcctatatgcgaagcaatggacaagattagatggcgtaggagctctcataattactcca
acaagggaactcgcatatcaaatatatgagacattgcggaaaataggtcgctatcatgat
atatcagcaggtcttatcattggtgggaaagacttgcaatttgaaaagaaaagaatggac
cagtgcaacatagttatttgtacaccaggtcgtctgttgcagcatatggatgaaaatcca
ttattcgactgtgtaaacatgcaggtattagttttagatgaagctgatcgatgcttggac
atgggatttgagcagaccatgaacgccatcattgagaatttaccacccaaacgacaaact
cttttattctctgctacacagacaaaatcagttagagatctggctcgattaagtctcaag
gatccaatatacgtctctgtccatgaacattcagctcatacaacaccagaaggtcttcaa
cagagttacgtcgtatgtaatttagaggataaaatggcaatgttatggtcttttattcga
aatcacctcaaacagaaagtcatcatattcttctctagctgcaagcaggtaaaatacaca
tacgaagccttttgcagaatgcgtccaggtgtaagtttattagctctttacggtagcctt
catcagctcaagcgaatgagcatctatgagacattttgcaaaaagcaacacgctgtactt
tttgcaactgatatcgctgctcgtggattagactttcctgctgtcaactgggtagtgcag
atggattgtcctgaggatgctaatgcatatattcatcgagcaggaagaacagcacgattt
caaagaggaggagaatccttgctcgtacttttacctagggaattggaaatgatcgaacgt
ctacaggaacgaaaaattcctattaatttgatcaaaatcaatccaaacaaattacattct
cctcaccggaaactggaggctctactggctcgcgatgttgcactgaaagaaacagcgcaa
cgtgcattcgtggcttatgtcaaatcagtcttcttaatgaaagacaaaaagatcttcgat
gtacactcactaaacacagacgattatgccagatcactggggttagctatcccgccaagg
atacgtttcttacaaagaatgcaaaaggttaccactaagaatgaggctacaaaggccgat
aaattcgtgaaaatgaaacaaaatgatgacgatattaaagagcaggagaattccgctaac
tcggatggacaaagtgaagaggaacaagaaaatttcgatcgcaatgaagataagtctacg
tttcatttcggtaatagaagctcctattatgctgcatgttatagctctaatgagaattat
attaaaaaatctacttttgtctttgtagatgacagtgacgatgataatgatattttgact
gtgaagagaaaaaatattcaaatcgaagatgcaattgatgacgctagtagtgtacacagt
gaagagatgaatttgcaatcaaaacagaaaaaagctgttaccaaggctgcaattgctaag
aaacttttgaagaagaaaatagtcccaaataaaaaaatcacctttgacgaagatggccag
gaacgcatagatccaacaaaatcgaaagtatccgaattagcaagacaatacgagaatgaa
gaagattctggaatcaatattgaaaaagcaaaagaaattctacgcgaggaagaccgcttt
gataaacaacgtttcaaagataagataaaagagaagcacagagaacaaaagcgtaagctc
aaagaaaccaagaagaaggtggaaagcgaggaagagagtgaagacgaagatgcaggtgtc
atacttggaaacggaagtggagatgaaagcgaagctgaatcaaatgagccagatttatcg
tggcttccggaccctgataaaatttatggaaagcaggagaattcaaacagcgacaaatca
tctaacgattctgaagaactcgaatcgatacacagtgcaccaaaacgcaaactggtgacg
caagaagaacacaagaaatcgacaaagaaaaaaccaaaattgacatccgatctacaaaac
gacgaggaacttgcactgcagctgttgcagagttga
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