Cephus cinctus (wheat stem sawfly): 107270896
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Entry
107270896 CDS
T07523
Name
(RefSeq) nuclear pore complex protein Nup54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
ccin
Cephus cinctus (wheat stem sawfly)
Pathway
ccin03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ccin00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107270896
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccin03019
]
107270896
Messenger RNA biogenesis [BR:
ccin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107270896
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
DUF4653
Motif
Other DBs
NCBI-GeneID:
107270896
NCBI-ProteinID:
XP_015601810
UniProt:
A0AAJ7FPF3
LinkDB
All DBs
Position
Unknown
AA seq
610 aa
AA seq
DB search
MSSKIRCNFCFSFFSSCFVIICINRLCFVSKIFSSNCHCWIGSFGTSFGFGTPVTSTAAL
SAFGTPATQSTSFGIGTPFATPAATGFGTGTTSTSTFGTTGTTGFGGGSTFGNTSISSTG
FGGLGALGTTSTTNVTGFGGFGGFGNTATTSTPSLFSGFGTASSGNTGFNASTGFGGFGA
KPATTGASTGFGGFGSGFAGFGSTLAQPQTQQQQQQQVANSITEALYNAVFNCQLFNDER
DNTIARWNLIQALWGTGKAYYSATAAPIELTQENPLCRFKAIGYSRMPDADNNDGLVVLC
FNKKEQELKDGKQQIIASLNGILGNKPNLTLTIDSVKAMGDGKGQVTIFVLEKGVTGSSR
KIPANELVAYLSQTMQKMQLTQMGVENIFAHVKLDPSQLKEYLDNPPCSIDPRLWKQAQL
DNPNPELYIPVPMIGFQQVKNRLKCQEEETARHRAFLDLAAERIQGLQRQHTATQARLKE
HRRTLLELQHRVLQVLVRQEISRKAGLSLQPEEEALTKRFEAMHSQISAPTQFKGRISEM
LSQLRMRRHIDSQNYERYTMDPIAQDDIKTYLNMEQQGMMQLISTINTDLENLKIIKDGM
EELLEGHSIS
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtaaaatcagatgcaatttctgtttcagtttcttcagtagttgttttgtaatc
atctgtattaatcgtttgtgtttcgtcagtaaaatcttcagtagtaattgccattgttgg
ataggtagtttcggaacatcttttgggtttggtacaccagtaacatctacagcagctctt
agtgcctttggtacacctgcaactcagtccacaagttttggaattggaacaccatttgca
acaccggcagcaactggatttggaacaggcactactagtaccagtactttcggcaccaca
ggaaccacaggctttggcggtggcagcacatttggcaacacatcaatttcgtcaactgga
tttggtggattaggtgcacttggaacgacctcgacaacaaatgtaacaggattcggtgga
ttcggtggttttggtaacactgcaacaacgtcgacgcccagtctcttcagcggatttggt
accgcaagttcaggcaatacaggatttaatgcttctactggttttggaggatttggtgct
aaaccggctactaccggtgcatctactggatttggtggttttggtagcggatttgccggc
tttggcagcaccctagctcaaccacaaactcaacagcaacaacaacaacaagtagccaat
tccattacagaggctttgtataatgcggtattcaactgtcaattatttaatgacgaacgt
gataacactatagcgcggtggaatctaattcaggccttatggggaactggaaaggcttat
tattcagcgacagcagcgccaatagaattgacacaggagaatcctctttgtagattcaaa
gctattggctatagtcgtatgccagatgctgacaacaatgacggtcttgttgttctttgc
tttaataaaaaagaacaagaactcaaggatggcaagcaacagataatagcgtcgctaaat
ggtatattgggaaataaaccaaatctcaccctgacaattgacagcgtgaaggcaatgggt
gatggcaaaggtcaagtgacaatttttgttttggaaaagggagtgacagggtcatccaga
aagataccagcaaacgaactagtggcttatttgagtcagacaatgcaaaaaatgcagctg
acacagatgggcgtggaaaatatatttgcccatgtaaaactagatccatctcaactcaag
gaatatttggacaacccaccctgctcgatagatcccagattgtggaagcaggcacaatta
gacaatcctaatcctgaactttatatccctgtaccaatgattggctttcaacaagtaaaa
aacagacttaaatgtcaagaggaagagactgccagacacagggcattcctggatttagca
gctgaaagaattcagggtcttcaaagacaacataccgctacacaagccagactcaaggaa
cacaggaggacattattagagttacagcatagagttcttcaagttctagttcgtcaagag
atcagcagaaaggctggactttcattgcaacctgaagaggaagccttgacgaaaagattc
gaagcgatgcactcacaaattagcgcaccgactcaatttaaagggagaattagcgaaatg
ctatcacagttaagaatgcgcaggcacatagactcacagaattacgagcgatacactatg
gatcctatagctcaggatgacatcaaaacttatcttaacatggagcaacaaggaatgatg
caactcatatcaacgataaatacagatttagagaatttgaaaataatcaaagacgggatg
gaggaactcttggagggacacagtatatcctga
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