Cephus cinctus (wheat stem sawfly): 107270950
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Entry
107270950 CDS
T07523
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
ccin
Cephus cinctus (wheat stem sawfly)
Pathway
ccin03013
Nucleocytoplasmic transport
ccin03015
mRNA surveillance pathway
ccin03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccin00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107270950
09122 Translation
03013 Nucleocytoplasmic transport
107270950
03015 mRNA surveillance pathway
107270950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccin03019
]
107270950
03041 Spliceosome [BR:
ccin03041
]
107270950
Messenger RNA biogenesis [BR:
ccin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
107270950
Spliceosome [BR:
ccin03041
]
Complex C
Other components
EJC/TREX
107270950
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSB_motif
RRM_1
Motif
Other DBs
NCBI-GeneID:
107270950
NCBI-ProteinID:
XP_015601914
UniProt:
A0AAJ7C5Q8
LinkDB
All DBs
Position
Unknown
AA seq
849 aa
AA seq
DB search
MSMRRKSERNKGKSSPEKKAEKPTRKSARRRAKRSPSSSPERDTVEDKPLNSPCTKEKAN
EKESTIQTRLQSKEIGDNTMDETKIASTGESSAAAEKTPEEEDGKSVWKVARADASPGEI
QKLKLCRQRNTSETSENSVTRKRSNKWQESGVGEEEEVDSSNERPGPRERSSSGNRKVEE
PSSSHPGQDSNEEVSARKEILSETTSANLSDAKPNIDRQGDTNEAGTAELSIDREQSPNA
NNETIDPNSIGGTPKEPMPQVEKTSDVEPSIVEENQSKTEQEDNLRKQSSSDDEKVEENR
ADSSPNSGAESESKTTTARSSPRTPSRAGRRKHRNKYHDSSNSDTPDSEDETSSERKRKE
SETREDKQDVEDTYKDRTSSSPEHRLDASITNNNADMETEPFDNNKEKSDMQVDKQEDMV
RPEIQAPLKPVKVNLKRSFSARISVDAELKKEDNDSNVDNDSATQNKENNAVSDQSDGKC
IPRKRRWGTSISTDVAPAFSVSTESLKALVPGAKPLPINEVRLSKDDNEDRERRKDRDKR
HMSVDSVGDYKIREDGTQQKSEATKKSDSKMENHIAARRKISIVKDAPLTKSPSPPACIP
TSILLIKNLVRPFTLNQIKELLSRTGTIIENGFWMDRIKSKCFVEYANEDQAFETRQALH
GISWPVSNPKRLHVEYANKEDMEAARESSKDQPLSRKTEPLQSADTWQQDWNRDEKTNAN
TKVMVVREWDLGKEDGQQHLKEKEREKKEAEKKRRQRSRSPTLEAHLPAPARKFKKKEDD
PPPAKLLDDLFRKTKATPCIYWLPLTNEQIVVKEEMRRQHMAEHARRLEEMRRVERNRDG
GRRRRSPRK
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgaggcgtaaaagtgagagaaacaagggaaaatcttcaccagagaagaaagca
gagaaaccgacacgtaagtctgctagaagacgagccaaaagatcaccctcatcatcacca
gaacgagacacagttgaggataaaccattgaacagtccttgcaccaaagagaaggctaat
gaaaaggaatctacaatacagactcgattacagtcaaaagaaataggagataatacaatg
gatgagacaaagattgcaagtaccggagagtcatctgcagctgctgagaaaaccccagag
gaagaagatggcaaatcagtctggaaagtggctagagcggatgcctcgccaggggagata
cagaagcttaagctatgtagacagcgcaatacatcggagacatcagagaactctgtaacc
aggaaaagatcgaacaagtggcaagaaagtggtgtaggtgaggaggaggaggttgactct
tccaatgagcgaccgggtcctcgtgagaggtcatccagtggcaatagaaaggtcgaggag
ccctcctcttcacacccaggtcaggattccaacgaagaggtaagtgctaggaaggagatc
ctgtccgagaccacttcagccaacttgtctgatgctaaaccaaacatagatcggcaaggc
gatacgaatgaggcaggtaccgccgagctaagcattgatcgcgaacagtcgccaaatgcg
aacaacgagaccatagacccaaattcgattggaggtactcctaaggagccgatgccacaa
gtggagaaaacatcagatgtggaacccagcatagttgaagagaatcagagcaagacagaa
caagaggacaatttgcgcaaacagtcaagtagtgacgatgagaaggtcgaggaaaatcgc
gctgattcgtcgccgaattccggcgcagaatcagaaagcaaaacgactacagcgagatca
tctccaagaacaccctcgcgcgctggtcgtagaaagcatcgcaataagtatcacgactcc
tctaattccgacacaccggactcagaagatgagacctcaagtgagcggaaacgaaaagag
tctgagactcgcgaggataaacaggatgttgaggatacatataaggacagaacttcttca
tcgcctgaacacagactcgatgcatccattactaataacaatgccgacatggaaacagaa
ccatttgataataataaagagaagtcagacatgcaagttgataaacaagaggacatggtt
cgtccagaaatccaggcgccgctaaagcctgtaaaagtcaacttgaagagatcattttct
gcaagaatatcagtggatgctgaattaaagaaggaagacaacgatagtaacgtcgacaat
gattcagcaactcaaaacaaggagaacaatgctgtaagtgatcaatccgatggaaagtgt
attcctcgtaagcgtcgttggggtacgtcaatttctactgatgtggctccagcattttca
gtttccacagaatccttgaaggcactagtaccaggtgcgaaaccactacctataaacgag
gtacgtttgtctaaggatgacaatgaagacagagaacgtcgcaaggatcgtgacaaacgt
catatgtctgtagacagcgttggcgactataaaattcgtgaagatggcactcagcagaag
agtgaagccacgaagaagagtgattcgaagatggaaaatcatatagcagccagacgaaaa
atatctatcgtaaaagatgcaccactaacaaagtcgccgagtcctccagcatgtatacca
actagtatactcctgataaagaacctcgtacgaccattcaccttaaatcagatcaaggaa
cttctttcacgtactggaacaatcatcgagaatggtttctggatggacagaattaaatcc
aagtgttttgtagagtatgctaatgaggatcaggccttcgaaaccaggcaagctcttcac
ggtatatcctggccagtttccaatcctaagagactacacgtcgaatatgcaaacaaggag
gacatggaagcggcgcgcgaatcgtccaaagatcagccactatctcgcaaaactgagcca
ttacaatcagcagatacttggcagcaggattggaatcgtgatgaaaagacaaatgccaat
actaaggtgatggttgtacgtgaatgggatttagggaaagaagacggtcagcagcatctc
aaagagaaggaacgtgaaaagaaggaagccgaaaagaagagaagacagagaagtcgaagc
cccacgctggaggctcatctcccagcacctgcacgtaaatttaagaagaaagaggatgat
cctcctccggcgaagcttctagatgatctctttaggaaaactaaggctactccgtgcata
tactggttgcctctgaccaacgagcagatcgtcgtcaaagaagaaatgagaaggcaacac
atggctgaacacgctcgcagacttgaggagatgaggcgcgttgagagaaatagggatggt
ggtcgtcgtcgtcgtagccctcgaaaataa
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