Cephus cinctus (wheat stem sawfly): 107271087
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Entry
107271087 CDS
T07523
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X2
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
ccin
Cephus cinctus (wheat stem sawfly)
Pathway
ccin03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ccin00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107271087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccin03019
]
107271087
03036 Chromosome and associated proteins [BR:
ccin03036
]
107271087
Messenger RNA biogenesis [BR:
ccin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107271087
Chromosome and associated proteins [BR:
ccin03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
107271087
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
107271087
NCBI-ProteinID:
XP_015602178
UniProt:
A0AAJ7FPR1
LinkDB
All DBs
Position
Unknown
AA seq
1885 aa
AA seq
DB search
MFGQTGNPPFGGFSATTPSSPFAASAFGKPNATTSFGTGSVPVFGSGNATVFGSKPAVST
TSPFFNTATTTPAFGQPATTHSSFGGFNTTNTNTNLFNTQQNANTNLFGTRNTAPAFGQS
STPSFGFPSSTSTSLFGQTQQPAQQVTPFGQSNPAGNTSLFGSTTGFGSNTAMGGMTGTV
IKFTAVTSTDTMVKNGVTQNISTRHHCITCMKEYENKSLEELRLEDYTAGRKGTAQAGQT
TGLFGATPQASPFANTAAGASSSTGAGFGSMTSGFGANAQTGSTSLFGKPMTGFGTPATT
TSAFAFNPTTTSNLFGANPQAKPFGTVAPTSLFSSTNTGQTTGAGFGAISGAQTSGFGAF
GSTPANQGLGLFNQNKPAFNAAVSTVSNGFGAFGQAAPTNTNTGFFGTKPSSATGFGTTS
TFGSTTAPTFGTAAGFGTTPNTGTSLFNTSFKSTGQTPGFSFGSTPISSSNLGGNTGLTL
GGGSSLFGAPKPGGLFGNSNTGASFNSSGTFGASTGFGTNTNATPGLGGGIIGGGLGTNQ
TQQNSGSVLMHQQILALVSSPFGDSPLLKDLQPASGKAEELLKPTNTSSRTLNNSQYKVA
TNNNSPKIKARAVTSTHLSKKSLFEGLEEEDPTLLEAFQPRTNTKRLVLRPKPIVSPQTQ
TTEDANLHNNDEGGRDEKVKSPSQLYNNDSADKENHEQDHRSNDDRRSSISWLKSSLTRK
NKTPDEDFEGHRSPFRNMGGLDEALENTVSELRPHSAAQIPSSLNNTATPNQSSSSINIS
RTGMDSTGHSSDSSHELEDTSNLVFQSDYKPNAAHVTLRRVGYYTIPALDRLEEYVKGET
CIVPNFTVARKGYGNVYFPDSFDVYGLNLDEIVHFRHKEVIIYPDDEKKPPVGQGLNRRA
QVTLDKVWPHDKTLHEPITNPERLTAMNYEAKLRRVCAKHDTRFLEYRPETGSWVFKVDH
FSKYGLSDSDDEDNDVPEDPRMKKFKNSNTKIQKPPGTLKQHMKPIHEFFSNGHSDTNGI
NNALNKVKDMADKSLSLQPDAIEEMELQSTENSICKDNMNNESQPILSPTAVYARIDCTD
SHKLLLMKANFFAMNNEEVETVGDSFTRGSFNKSQFDEINEFMQEDKTMSVEYISTLRSN
TNLQERYTSLLPSKQQLKGEKISTIELLTKSSTNILKVLPVPVVTPVTVVLKFPSEIIPL
HKTIASKLQFHCIADCGIQMGRMFKPRWGPGLQLITLNTQKECDRAERHAPLKQLESYVS
GRSVDDMTSSIVQRLKILGGCENDNDYVQMFKESIEGHLRIELDHCIIEQEDDCLTVSTG
ESLDALHAHCALAQELANRSKPDRLALYTRDVWDLCVALWGDLPDLKPQEDKADYHNSMV
RREALSEWFKNVIDSSVQDAIANTTNNDRILLLLLSANELEEACKLAQKAGDYCLALIIA
QLGGSSGPKELIKQQIALWQDSEVDAHIGIDRLKLFMLAAGIPLIFSKQGVINICEDFDW
KSVLALHLWYLSPPISSIMDALELYETAFDTSSPELCAYAPEPRPEYKLEHEDDYETEVT
SGKKVYDLRYHLLKLYCTGNHSLEELLNPATHSVDPLDYRLSWLVQQVLLSLGYSHISAH
ANALTHINFAAQLESYDLWHWAIFVVLHLKDTTKRRLAIIDLLSRHVQLDDDPEYVKREE
FLREELGIPSIWINKAKSIKSCIVKRYGEAAWYLIQAEQWNEAHEVIIQHLAADAIINEN
YEYLKSLLTPLAQTECTNTISGWAHQGQLLWDYMLITEEMETLVRSSDRYGIGYKLELLR
PQLTSLCDKINQFPCYSSKHRLCQAEIAKRTSHLARSLLLLESKGCTSMVKVLSHLVSVL
PLPEDYAQQELRCITNMCINEVATH
NT seq
5658 nt
NT seq
+upstream
nt +downstream
nt
atgtttggacaaacaggaaatcctccttttggagggtttagtgcaacaacgccgagtagt
ccattcgcagcatctgcttttggaaaaccaaacgccactacaagttttggcacaggatct
gttcctgtgtttggaagtggtaatgctactgtttttgggtcaaaaccggcagtttctaca
accagtcccttttttaatactgcaactacaactcctgcatttggacaacctgctacaact
cattcgtcttttggaggattcaatactacaaatacaaacacaaatttgttcaacacccag
caaaatgcaaatactaatttatttggaactcgcaatacggcacctgctttcggccagtcg
agtactccaagttttggttttccatcttcgaccagcaccagtcttttcggtcaaacacaa
cagccagcgcaacaagtaactccttttgggcaaagcaacccagccgggaacacaagtctt
ttcggttctacgacaggattcggaagcaataccgccatgggaggtatgactggtacagta
atcaaattcactgctgttactagtacagatactatggtgaaaaatggagttactcaaaat
atttcaacaagacatcattgcatcacttgcatgaaagaatatgaaaacaaatcattggaa
gaattacgtctagaggattatacagccggtcgtaagggaactgctcaagctggacaaact
acaggtctatttggcgccactcctcaagcttcacctttcgcaaatacagctgcaggagca
agctcatcaactggcgcaggtttcggatccatgacgagcggattcggagctaacgcgcaa
actggttcaacaagtctttttggaaaaccaatgactggttttggaacaccagcaacgaca
actagtgcttttgccttcaatccaacaacaacgtcaaatctttttggcgccaatcctcaa
gcaaaaccttttggaactgttgctccaacttctttattttcgtcgaccaatactggtcag
acaacaggcgctggttttggtgctatcagtggtgcacagacaagtggtttcggagctttt
gggtcgacaccagctaatcaggggcttggattgtttaatcaaaacaagccagctttcaat
gctgcggtttccaccgttagtaatggttttggagcatttggacaagccgcaccaacaaat
actaatactggcttctttggcactaagccatcaagtgccactggattcggtacgacgtca
acctttggatctacaacggcacccacttttggaaccgccgcaggtttcggtacaacacca
aacactggtacatctttatttaacacgtcttttaaatccacaggacaaaccccgggcttt
tcttttggctcaacacctatatcttcgagtaacctcggtggtaatacaggtttaactcta
ggaggcgggtccagtctttttggggcaccaaagccaggtggtctttttggaaatagcaat
acaggtgcttcatttaacagtagtggcacatttggagcctcaactggttttgggacaaat
acaaatgctactcctggacttggcggaggcattattggtggagggttaggaacaaatcag
actcaacagaacagtggatcggtattgatgcatcagcaaattttggcgttagtatcttca
ccttttggtgattcgcctctgttgaaagatctccagcctgcatctggaaaagcagaagaa
ctgttaaaacctacaaacacgtcgtctcgaactctaaacaattcgcagtataaagtggca
acaaataacaattcaccaaagattaaagctcgagctgttacttcaacacatttatctaag
aaatctctgttcgaaggacttgaggaagaagacccgacattgttggaagctttccagcct
cgcactaacacaaaacgcttagtgctccgaccaaaaccaatagtaagtccacaaacgcag
acaacggaagatgcaaatttgcataataatgatgaaggaggaagagatgaaaaagtgaag
tctccatctcaactatacaataatgattctgccgacaaagagaatcatgaacaagatcat
cgatccaatgatgatagaagatcatccatatcatggttaaaatctagtctcactcgaaaa
aataagactccggatgaagattttgaaggacacaggtctccatttcggaatatgggcgga
ctcgatgaagctcttgaaaatactgtttctgaattaagacctcacagtgctgcacaaatt
ccatcatcattgaataatactgctacacccaatcaatcaagtagctcaatcaacatttct
agaacagggatggattctactggtcacagtagtgattcaagtcatgaactcgaagataca
tctaacttagtgtttcaatcagattacaaaccaaatgcagctcacgtaactcttcgacgt
gtgggttattatacaattcccgctcttgaccgattggaggagtatgttaagggcgaaaca
tgtattgtaccgaatttcacagtggcccgaaagggttacggtaacgtttattttccggat
tcattcgatgtttatggattgaacctagacgaaattgtacattttcgacacaaggaagtc
ataatttatccagacgatgagaaaaagccacctgttggtcagggtttaaatcgcagggcg
caagttacactagataaagtatggccacatgacaaaacacttcatgagccaattacaaat
ccagaacgtctcaccgcaatgaactatgaagctaagcttcgcagagtctgcgcgaaacat
gatactcgctttcttgaatatcgtccagaaacaggatcgtgggtctttaaggttgaccat
ttttcaaaatacggccttagtgattcagatgatgaagacaatgatgttcctgaagatccg
agaatgaaaaaattcaaaaattccaacactaaaattcagaagccgcctggaacattaaaa
cagcacatgaaaccgattcacgagttttttagcaacggacattcagatacaaatggaatt
aataatgcactaaataaagtcaaagacatggctgacaaatctttatctcttcaacctgac
gctatagaagaaatggaattgcaatctaccgaaaattctatctgcaaggataacatgaat
aatgaaagccaaccaatattaagtccaactgcagtttatgctcgaattgattgcacggat
agtcacaaactactgttgatgaaggccaacttttttgcaatgaataacgaagaagtagaa
actgttggcgattcctttacaagaggatcatttaacaaaagtcaatttgatgaaattaat
gagtttatgcaggaggataaaacaatgtctgtggaatatatttcaacactacgttcgaat
acgaatcttcaagagcgttatacttcactgttaccatcgaaacaacagttaaaaggtgaa
aaaatcagtaccatcgaacttttgacaaagagctcgactaatattttgaaagtattacca
gtcccagtggtaactcctgtgacagttgtcttgaagtttccatctgaaatcattccatta
cacaaaaccattgccagtaaactacaatttcactgtatcgccgactgtggtatacaaatg
ggacgcatgtttaaaccgcgatggggtcctggtttgcaattgattactttaaatacacaa
aaggaatgtgatagagcggaaagacatgcaccattgaaacagcttgaatcttatgtatcg
ggtcgctctgtggatgacatgacatcaagtattgtccaacgcttgaaaattttaggtggc
tgtgagaatgataatgactatgtccaaatgttcaaggagagtatagaggggcatctgcgt
atcgagctagatcattgcatcatcgaacaagaagatgattgtctgaccgtgagtaccgga
gaaagtcttgatgctctacatgctcattgtgcgttggcacaagaactcgccaatcgatca
aaaccagatcgtttagctctgtatacgcgggacgtgtgggatctttgcgttgctctttgg
ggagatcttcccgatttaaagccacaggaagataaggcggactaccacaattcgatggta
cgacgagaagccttgagcgagtggttcaagaacgtaattgacagtagtgtgcaggatgct
attgcaaatactacaaacaatgatcgcatattgttacttttactctctgccaacgaattg
gaagaggcatgtaagctggcacaaaaagcaggtgattattgcttagcgttgataatagct
caactaggcggctcctcaggcccaaaggaattaataaaacagcagatcgcattgtggcaa
gatagtgaagttgatgcacatattggaattgatcgtttaaaactgttcatgctcgcggcg
ggcataccacttatatttagcaaacaaggagtcatcaatatttgtgaagacttcgactgg
aagagtgttttagctttacatctatggtacctatctcctcctatttcatcgattatggat
gcattagaactttatgaaacagcatttgacacaagttctccagaactttgcgcatatgca
ccagaacctcgccctgaatataaacttgaacacgaagacgattacgaaacggaagtgaca
agtgggaaaaaagtttatgatctccgatatcatcttttgaaactttattgtactggaaat
cattcgttagaagagctcctcaatccagcaacacactccgttgacccacttgattataga
ctaagttggttggtacaacaagttcttttatcgctgggatattctcacatttcggcacat
gcaaatgcattaactcatataaattttgctgcacaactggaatcctatgatttatggcat
tgggctattttcgtggttttacacttgaaagataccacaaaacggcggcttgccataatt
gatttgttgtcacgacacgtacaattagatgacgatccggagtacgtcaaacgagaagaa
ttcttgcgagaagaactgggtataccatcgatctggatcaataaagccaaatctataaaa
agttgtattgtaaaacggtatggagaagcagcttggtaccttatacaagcagagcaatgg
aatgaggcgcatgaggttatcatacagcacttagcagctgatgcaataattaatgaaaac
tacgaatatcttaagtcactgttgactccactagcgcaaactgaatgtactaacacaatc
agtggatgggcacaccagggccagttactatgggattatatgttaattacagaagaaatg
gaaactcttgttcgcagctctgaccgttatggaatcggatacaagttagaactactacgt
ccacagttaactagtctctgcgataaaattaatcaatttccatgttattcttcaaagcac
agattatgccaagcggaaattgcgaaaagaacttcacatctcgcaagaagtttattatta
ctggaatcaaagggatgcacatcaatggtgaaagtattgtcgcatttggtttctgttcta
ccactacccgaagattatgctcagcaagaattacgttgcattacaaatatgtgtattaac
gaagtagccacgcactga
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integrated database retrieval system
