Cephus cinctus (wheat stem sawfly): 107271855
Help
Entry
107271855 CDS
T07523
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog isoform X1
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
ccin
Cephus cinctus (wheat stem sawfly)
Pathway
ccin04140
Autophagy - animal
ccin04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ccin00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107271855
04148 Efferocytosis
107271855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccin04131
]
107271855
Membrane trafficking [BR:
ccin04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
107271855
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
Clathrin
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
WD40_Prp19
Beta-prop_HPS5
zf-RING_Vps41
TPR_7
TPR_PEP5_VPS11
zf_RING_Vps8_fungal
zf-RING_5
Beta-prop_EML_2
WDR55
zf-RING_2
Vps39_1
Beta-prop_CAF1B_HIR1
zf_RING_Vps8
Beta-prop_RIG_2nd
TPR_12
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
zf-RING_11
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
107271855
NCBI-ProteinID:
XP_015603841
UniProt:
A0AAJ7FQV7
LinkDB
All DBs
Position
Unknown
AA seq
846 aa
AA seq
DB search
MNNIEQNNEEYSDSEVDEVEPRLKYVRVRNDLENILQNDAASCIAVHPKFLCLGSHWGMI
HLLDHQGNNIRSKTLQAHTVAVNQISIDLNGDFIASCSDDGKVFIYGLYSTENNHNMSMG
RLVKSIAIDPNYYKSGSGRKFITGDDKLVLYEKTFLSRIKPTILCEAEGGVRSVAWAGQF
VAWASDTGVRIYDLHARCSLCLIKWNRTTEALPEHYRCNLRWSDDTILLIGWVDTVRICQ
IRKRSLQEMASRDLPEFVVDPISTFRVDFYISGIAPLESQLILLGCLKESDEDGKSQRPT
LHVVEPKYQDFSAICANSLTLRGYKEYSCNDYHLDCLTDENRFFIVSPKDIVIASLYDAD
DRIEWLLSHGKFEQALEAITSNAGKDCKKHSLIYVGRVYLDYLLSHEKYDEAGKLCLKIL
GRDKKLWEEEVYKFARVHQLRSISSYLPRGDVTLDPLIYEMVLYEYLKMDLDGFLQLIKE
WPPNLYTVAAVVNGVLEHLPVHKQRHNILLEALAILYSHDGKYDKALAMYLKLRHKDVFH
LIQKHQLYNSIYDMIEGLMDLDAERAIQFFLEKDRVPSNIVVQKLRNNHRYLYMYLDALH
RKDTKDSKGKYHGLLVRLYADYSRDKLLPLLRRSDNYPIEEALDICTQRKFYPEMVYLLG
RIGNTTEALGLMTRELNDMESAIAFCQEHDDEELWNDLVNYSLDKPVLLSEAITFLLQRI
GTYVDPRVMVQRIEPSLEIPGLKNALVKMICDYNLQVSVQEGCKKILSSDYFNLHERLVR
FHQKGISMDDYQMCGACHRNIVVKEPRSVVIFYCRHTFHEDCLPNLEVVDNCVICNPQKN
VSLERT
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgaataatattgagcagaataatgaagagtactcagattcagaagtagatgaggttgag
ccaagacttaagtatgtcagagtacgaaatgatttggagaatattctgcaaaatgatgca
gctagctgcattgctgtacaccctaaatttttatgcctaggatcacattggggaatgatt
catctattggatcatcaaggaaataatataagatcaaaaactcttcaagcacatacagtt
gcagttaatcaaatttctattgatttaaatggagactttatagcatcatgcagtgacgat
ggaaaagtttttatctatggactttatagtacagaaaataatcacaatatgagtatgggt
cgtttagtgaaaagtattgcaatagatccaaattattacaaaagtggtagtggaagaaaa
tttatcacaggagacgataaacttgttctatatgaaaaaacatttctatcaagaataaaa
cccactattctttgcgaagctgaaggtggtgtacgttcagtggcatgggcaggacaattt
gtagcatgggcctctgatacaggggttagaatatatgatttacatgctcgatgttcctta
tgtcttatcaagtggaatagaacaacagaagcattaccagagcattacagatgtaattta
agatggtcagatgatacaattctgctcattggttgggttgacactgttcgtatttgtcaa
attcgaaagagatcattacaagaaatggcaagtagagaccttccagagtttgtagtagat
ccaatatctacctttagggtagacttctatatatctggaattgctcctctggaaagtcaa
ttgatacttctgggctgtttaaaagaatctgatgaagatggaaaaagtcaaagaccaact
ctgcatgttgtagaaccaaaatatcaggatttttctgcaatatgtgctaattctctgaca
ctgcggggatataaagaatatagctgtaatgattatcatttggactgtcttacagatgaa
aatagattttttatagttagtcccaaagatattgtaattgcaagcttatatgatgctgac
gatagaatcgaatggttactatctcatgggaagtttgaacaagctttagaagccattaca
agtaatgctggcaaagattgcaaaaagcattctctaatctatgttggcagagtttatttg
gattatcttctgagtcatgagaaatatgatgaagctggaaagttgtgtctgaaaattctt
gggcgagacaagaaactctgggaagaagaggtatacaaatttgcaagagttcatcaactt
agatcaatctcttcatatttgcctcgaggagatgttacgttggatccattaatttatgaa
atggttctatatgagtacttgaaaatggatcttgatggttttctacaattaattaaagaa
tggccaccaaacttgtacacggtggcggcagtagttaatggagtcttagagcatcttccc
gtgcataaacaaagacataacattcttcttgaagcacttgctattctatatagtcatgat
ggaaagtatgataaagcactagcaatgtatttgaaactacggcacaaggatgtatttcac
ttgatccagaaacaccaactgtataattcaatatacgatatgattgaaggattaatggat
ttagatgctgagagagcaatacaatttttcctagaaaaagatcgtgtcccatcaaatatt
gtggttcaaaagttacgaaataatcatcgttatttgtatatgtatttagacgcactgcat
cggaaagatactaaggattcaaagggaaaataccatgggcttttggtgcgtctttacgcc
gattattcgagggataaattactacctcttttacgacgctctgataattatccgatagaa
gaagcactagatatatgtactcaaagaaaattttacccagaaatggtttatcttttgggt
agaatcggcaatactaccgaagctttaggacttatgaccagagaattaaacgacatggaa
agcgctattgcattttgccaagaacatgatgatgaagaattgtggaacgatcttgttaac
tactctcttgataaacctgttttactttcagaggcgattacatttttactccagagaata
ggaacctatgtagatcccagagttatggttcagagaatagaaccttctttagagattcct
ggattaaagaatgctctggtaaaaatgatatgtgattataaccttcaggtttccgttcag
gaaggctgcaagaaaattctttccagtgattatttcaatttgcacgagagactcgtacgc
tttcatcagaaaggaatttccatggatgattatcaaatgtgcggtgcttgccatagaaac
attgtcgtaaaagaacctagaagtgtagttatattttactgtagacatacgtttcatgaa
gactgtttaccaaatttggaagtggtggataactgtgtaatatgtaatccccaaaaaaat
gtatcattagaacggacataa
DBGET
integrated database retrieval system
