KEGG   Cephus cinctus (wheat stem sawfly): 107272127
Entry
107272127         CDS       T07523                                 
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
  KO
K12828  splicing factor 3B subunit 1
Organism
ccin  Cephus cinctus (wheat stem sawfly)
Pathway
ccin03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107272127
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ccin03041]
    107272127
   03036 Chromosome and associated proteins [BR:ccin03036]
    107272127
Spliceosome [BR:ccin03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    107272127
 Complex B
    107272127
 Complex C
   U2 SnRNP specific factors
    107272127
Chromosome and associated proteins [BR:ccin03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    107272127
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N HEAT_ECM29 HEAT_2 Htt_N-HEAT_1 XMAP215_CLASP_TOG UME CEP104-like_TOG DUF2298
Other DBs
NCBI-GeneID: 107272127
NCBI-ProteinID: XP_015604438
UniProt: A0AAJ7C955
LinkDB
Position
Unknown
AA seq 1316 aa
MDSIPRTHEDIEAQIREIQSKKKDIQNASAEKDQVALGKTGFYDQDIYDGAKNKYDGYVT
SIAANDEIEDEDFEHNTFSSSKRPGYNAPAALLNDVAQSDKDYDPFADRRRPTIADREDE
YRQKRRRMIISPERVDPFAEGGKTPDIGSRTYTEIMREQLLKGEETELRKKLVEKAKDGT
LKANGEPKPAPKKRGRWDQTDDAPTPKKSTGTAATPTSWDNADVTPAAIRWDETPGHGKG
GETPGATPGVSTRMWDATPGHATPGAVTPGRETPSHEKAVSSRRNRWDETPKTERETPGH
NSGWAETPRTDRVAGDLIQETPTPSASKRRSRWDETPSNQTPGSMTPQTPATPLTTPHQS
SILTPSGVTPTGPKAMGLATPTPGHLMSMTPEQLQAYRWEREIDERNRPLSDDELDAMFP
PGYKVLQPPAGYIPIRTPARKLTATPTPVAGTPHGFFIQTEDKSAKFVDNQPKGNLPFMK
PEDAQYFDKLLVDVDEESLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGA
GPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYY
ARVEGREIISNLAKAAGLATMISTMRPDIDNIDEYVRNTTARAFAVVASALGIPSLLPFL
KAVCRSKKSWQARHTGIKIVQQIAILMGCAILPHLKSLVEIIEHGLVDEQQKVRTITALA
IAALAEAATPYGIESFDSVLKPLWKGIRTHRGKGLAAFLKAIGYLIPLMDAEYANYYTRE
VMLILIREFQSPDEEMKKIVLKVVKQCCGTDGVEAQYIKDEILPHFFKHFWNHRMALDRR
NYRQLVDTTVEIANKVGASEIINRVVDDLKDENEQYRKMVMETIEKIMGNLGAADVDSRL
EEQLIDGILYAFQEQTTEDVVMLNGFGTIVNTLGKRVKAYLPQICGTILWRLNNKSAKVR
QQAADLISRIAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMTK
MTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGPEYVSAREWMRICFELLELLKA
HKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTV
LPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVSPLLEDALMDRDLVHRQTA
CAAIKHMALGVYGFGCEDALIHLLNHVWPNVFETSPHLVQAFMDAVDGLRVALGPIKILQ
YTLQGLFHPARKVRDVYWKIYNSLYIGGQDALVAGYPRIMNDPKNQYIRYELDYVL
NT seq 3951 nt   +upstreamnt  +downstreamnt
atggactccattccaagaactcacgaagatattgaagcccaaattcgggagattcaatca
aagaagaaagacattcaaaatgcttctgcagagaaggaccaagttgcattaggaaaaact
ggattttatgatcaagacatttatgatggtgcaaaaaacaagtatgatggctacgtcaca
tcaattgctgcaaatgatgagattgaggacgaagattttgagcacaacacatttagctca
agtaaacgaccaggttacaatgcaccagcagctttacttaacgatgtggcacagagtgac
aaggattatgatccatttgctgacagaagaagacccaccatagctgatcgcgaggacgaa
taccgtcaaaagcgtcgtcgcatgatcatttcaccagagcgtgttgatccatttgccgag
ggcggtaagacaccggacatcggatctaggacttatacggagattatgcgagagcagctg
ctcaaaggagaagaaactgagttgagaaagaaactggtggagaaagcgaaggatggcaca
ctgaaagccaatggagagccaaaacctgctcctaaaaaacgtggtcggtgggatcagact
gatgacgctcctacgccaaaaaaatcaactggcacagctgctacaccaacttcctgggac
aatgcagatgtaactcctgctgctatacggtgggatgagacaccaggtcatggcaaagga
ggtgaaactcctggtgccacacctggtgttagtactagaatgtgggatgctactccaggg
catgcgactcctggtgcggttactcctggtcgagagactccttcgcatgaaaaggctgtc
tccagtcggcgaaacagatgggacgagacgcctaaaacagaaagagaaacgccaggacac
aatagcggttgggctgagactcccaggacggatcgtgtggccggagatttgattcaggaa
acacctacgccgtctgcaagtaaacgcagaagtcgttgggatgagacaccatctaatcaa
actccaggatcaatgacaccgcagactccagccacacctttgactactccgcatcaaagt
tctatactgactcctagtggagtcactccgacagggccaaaagctatgggattggccact
ccgacacctggacatctcatgtccatgactcctgaacaacttcaggcttatcgttgggaa
cgagaaatcgatgaacgtaacagaccactttcggatgatgaattggatgctatgtttcca
ccaggatacaaagttcttcaaccgcctgctggatacatacccatcaggactcctgccagg
aaacttacagcaacacctactcctgttgccggaactcctcatggatttttcatccagact
gaagataaaagtgctaaattcgtggataaccaaccaaaaggcaatcttcctttcatgaag
cctgaggacgctcagtactttgacaaacttctagtggacgttgacgaagagtctttgagt
cctgaggaacagaaggaacgtaaaatcatgaagcttttgttaaaaataaaaaacggtaca
ccacctatgcgtaaagcagcactgaggcagatcaccgacaaagccagagagtttggtgct
ggtccattgttcaatcagattctgccgcttcttatgtcacccacattggaggatcaggaa
cgtcatcttcttgtcaaagtcattgatagaatactctacaagcttgatgacctcgtaaga
ccctacgttcacaaaatcttggtcgttatcgaaccattacttatcgatgaggattactat
gcccgtgtggaaggtcgtgaaattatatcgaacttggctaaggctgcagggttggccaca
atgatctctacaatgagacccgacattgataacattgacgaatacgtcaggaataccaca
gccagggccttcgccgtcgttgcatcagctcttggaattccatcgctgttgccttttcta
aaggctgtatgtcgtagtaaaaaatcctggcaggctcgacacactggcataaagattgtt
cagcaaatagcaattctcatgggctgtgcaattttgcctcacttgaagagcttagtagaa
atcattgaacacggactggtcgatgagcaacaaaaggttcgtactatcacagctttggct
attgctgccttagccgaagctgcgactccctatggtattgaaagtttcgattctgttcta
aaaccattgtggaaaggtataaggactcatcgtggaaagggcttagctgcttttctcaaa
gctattggttaccttatccctcttatggacgccgaatatgcgaactattatactcgtgaa
gtgatgttgattctcatacgggagttccagtcgcctgacgaggagatgaagaagattgta
ttaaaggtcgttaaacaatgttgcggtaccgatggtgtggaagcgcaatacataaaggac
gaaattcttccacactttttcaaacatttctggaatcatcgtatggcacttgaccgtaga
aattacagacagttagtagacaccactgtggagatagccaacaaagttggcgcttcagaa
ataataaatcgcgtagtcgatgaccttaaggatgaaaatgagcaatacagaaagatggtc
atggagacaattgaaaagattatgggtaatttgggtgcggccgatgtggactctcgtttg
gaggaacaactcattgacggaatcctttacgcttttcaggaacagacaactgaggacgtg
gtgatgctcaatggcttcggtactattgtcaatacattgggtaaacgtgtaaaggcttat
ctacctcaaatttgtggtacgattctctggcgattgaataacaaatcggccaaagttcgt
caacaggctgcagatcttatatcgcgaattgcagtcgtgatgaagacttgtcaagaggag
aaacttatgggacatttgggtgttgtcctttacgagtatctaggtgaagaatatcctgag
gtacttggcagtattcttggagctttgaaagctattgtaaatgtaatcggaatgacaaag
atgactccacctataaaggatctactacctcgtctgacgccgatcctcaaaaacagacac
gagaaggtgcaagaaaactgtattgatcttgttggaagaatagcagacagaggtccggaa
tatgtttcagccagagaatggatgcgcatttgttttgagttgttggaactcttgaaagct
cataaaaaagctattcgcagagccacagttaatacattcggttacatagctaaagctatc
ggcccgcacgacgttctcgcgacgcttttaaacaatctgaaggtgcaagagagacaaaat
cgcgtttgcactactgtcgcaatagccatcgtagctgaaacttgcagtccattcacagta
ctaccagccctgatgaacgagtacagagttcctgagttaaatgtacagaatggagtacta
aaatccttgtcattcttattcgagtacatcggtgagatgggtaaagattacatctatgca
gtgagtcctctcctggaagatgctcttatggacagagacctggtacacaggcaaacagcc
tgtgcagcaataaaacacatggcactcggtgtctatggatttggttgtgaagatgcttta
attcatctcctgaatcacgtatggccgaacgttttcgaaacttccccgcatctggtacaa
gctttcatggacgccgtggatggtcttcgtgtcgctctaggtccgattaagatacttcag
tatacgctacaaggattgttccatcctgcgcggaaagtgcgcgacgtttattggaaaata
tataattcgctttatatcggtggtcaggatgcactagtcgccggctatcccaggatcatg
aatgacccaaagaatcagtacatcaggtacgagctcgattacgtcttgtaa

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