Cephus cinctus (wheat stem sawfly): 107272443
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Entry
107272443 CDS
T07523
Name
(RefSeq) transcription elongation factor SPT6 isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
ccin
Cephus cinctus (wheat stem sawfly)
Brite
KEGG Orthology (KO) [BR:
ccin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccin03021
]
107272443
03036 Chromosome and associated proteins [BR:
ccin03036
]
107272443
Transcription machinery [BR:
ccin03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
107272443
Chromosome and associated proteins [BR:
ccin03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
107272443
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
S1
SH2
HHH_3
HHH_9
Tex_YqgF
Spt6_S1
Tex_central_region
HTH_10
Tex_N
OB_RRP5_4th
S1_RRP5
Motif
Other DBs
NCBI-GeneID:
107272443
NCBI-ProteinID:
XP_015605091
UniProt:
A0AAJ7FRU5
LinkDB
All DBs
Position
Unknown
AA seq
1779 aa
AA seq
DB search
MADFLDTEAEESEEEEELDYTEKKKLKKLKTVEESDEEEEDDEDRLREELKDLIDDNPIE
ESEGEDSDNSGGSKKRKKSDDEDFDDRLEDEDYDLIEENLGVKVERKRFKRLRRIQDEES
EEEQEQEADEERDAIANELFEGSGDERDGLVEDERRSERSHRPEAETFDEEGSEGEYSDA
DDFIVDDDGRPIAERRKRKKHIFSDAALQEAQDIFGVDFDYDEFGKYGEEDYEEEEEDEE
DEYVDDDGDGERPRRPKKQPKKKPTKKSIFEIYEPSELKRGHFTDMDNEIRNTDIPERMQ
LRSVPVTSVPEGSDELDLEAEWIYQQAFCRPTVSIQDAHLNAEAKERARKGPQTVGKIKK
ALDFMRNQHFEVPFISFYRKEYVLPELNINDLWKVYKFDAKWCQLRQRKENLLKLFEKMR
NYQLDEIMKNPDAPLPDNVRVIREEDIDRLKNVQTSDELNDVHHHFMLYYSHEIPAMQET
VRKKEREARREARIQRRRQQIAEAEENGEEPPPEDEIDVEEEDEPDETLKQAVRTGPYSI
CRKAGLDGLAKKFGLTPEHFAENLRDNYQRHEVDQDPTEPSTVALDFCGAKFKTHEEVLK
AAQLMVAIQLAREPLVRKCVREMYMERAKISVHPTKRGIKEIDENHPIYGMKYLKDKPVR
DLDGDQFLKLSIAEEDKLITITMSDTIEGNTSSNYVEEMKQLYYRDEFSKTVQDWNALRV
GSVEMALTRMVIPDLKKELRSNLIAEGKECVLRACCRKMYNWIKVAPYSCEFPEEEDEEW
DTSKGLRVMGISYVPDYSQAAFTCLVAPDGECTDYLRLPHLLKRKNGFREDEKMMKEADL
LAIRNFIATKKPHVVVIGGESREAMMIATDLKEVIATLVEDEQFPSIQVEICDNELAKIY
SNSNKGIAEFRDYPELLRQAISLARRMQDPLVEFSQLCTADEEILCLRYHTLQDQISKEE
LLENLYLEFVNRVNEVGVDVNKAVQQAYAGNLVQFVCGLGPRKGQALIKMLKQTNQRLEN
RTQLVTACHMGPKVFINCAGFIKIDTNSLGDSTEAYVEVLDGSRVHPETYEWARKMAVDA
LEYDDEDANPAGALEEILESPERLKDLDLDAFAEELERQGFGNKCVTLYDIRAELNSRYK
DLRVPYQSPSAEKLFDILTKETPDTFYIGKLVLASVVGISHRKPQGEQLDQANPVRNDET
GLWQCPFCLKNDFPELSEVWNHFDAGACPGKATGVRLRLDNGISGYIHIKNLSDRHVANP
EERVGIGQIIHCRIIKIEVERFSVECTSKSSDLADKNHEWRPQKDPFYDTEAEQKDLKVE
EEAKKAKQRQTYVKRVIVHPSFHNISFAEAEKLMQHMKQGEAIVRPSSKGADHLTVTWKI
TDDIYQHIDVREEGKENAFSLGQSLWIGNEEFEDLDEIIARHVNPMAAYASELLDFKYYK
PNIDGLKDKAEEILKDQKKENPGGIPYIISAAKSYPGKFLLSYLPRVRCRHEYVTVSPEG
FRFRGQMFGRVNDLFRWFKEHFRDPVPGQATPSTPRGAMTSRTPYHTTPGVNVSGMNQEA
IQRVAQNLPHHMIHSLSQVANQTPHHYPPHTPGTAGATGYGGMHTYPNTPYTPSGQTPFM
TPYQTPHHTPHHAQPTPRYSQHSQHGQHGQQTPSHHQGPFLHPGPPTVTPVHHRSTPSHR
PTPPIGTPSGDPMDWKKAAEAWARLKQTMPRMSGGTPRYEDSRKTPRGYEESSGRATPRN
RPPSARTPSYKSPRGTPHTNSSPRSMSLSGDGTPLYDES
NT seq
5340 nt
NT seq
+upstream
nt +downstream
nt
atggcagattttctggatactgaggctgaagagagcgaggaggaagaggagttggattat
actgaaaagaagaaattaaagaaattaaagactgtggaggagagtgatgaggaggaagaa
gatgatgaggaccgacttcgtgaagaactgaaagatcttattgatgataatcctatagag
gaaagtgagggagaggatagcgataattcaggtggttctaagaaacgtaaaaaaagtgat
gatgaagattttgatgaccgccttgaggatgaagattatgatctcatagaagagaattta
ggtgttaaagttgaaaggaaacgcttcaagcgcttgcgaagaatacaagatgaagaatct
gaggaggaacaagaacaagaggctgatgaggaaagagatgcaattgcaaatgaactattt
gagggttccggtgatgaaagggatggattggtggaggatgaacggagaagtgaacggagt
cacaggcctgaggcagaaacatttgatgaggaaggaagtgaaggtgaatactcagatgca
gatgatttcattgtggatgacgatgggagacctatcgcagaaaggcgaaaaaggaaaaag
catatattctctgacgcggctcttcaagaagctcaggatatttttggtgtggacttcgac
tatgatgaattcgggaaatatggtgaggaagattacgaggaagaagaggaagacgaagag
gatgaatacgttgacgatgacggggatggagagagaccacggcgtccgaagaagcaacca
aagaagaagcctacaaaaaagagtatttttgaaatatatgagccaagtgaactcaagaga
ggtcattttacggacatggataatgaaattcgaaatacagatataccagagcgaatgcaa
cttcgttcggtaccagttacttctgtaccagaaggttccgacgaattagacctcgaagca
gaatggatttatcaacaggcattctgccgaccaacagtatcaattcaagatgcacactta
aacgccgaagcaaaagaacgagcacgaaaaggaccacaaacagttggaaagatcaagaag
gctttagatttcatgagaaatcaacactttgaagtaccattcatttccttctatagaaag
gaatacgttctcccagaactcaacattaacgacctctggaaagtatacaaatttgacgct
aagtggtgccagttacgtcaaagaaaagaaaacttgttgaaactctttgagaaaatgcga
aactatcagcttgatgaaattatgaagaacccagacgctccacttcctgacaatgtgcgc
gtcatccgggaggaagacatagatcgtttgaagaatgttcaaactagcgatgagctgaat
gacgttcatcatcatttcatgctgtattacagccacgaaataccagcaatgcaggagacc
gtcagaaagaaagaaagggaggctagacgcgaagcaagaattcaaagaagaagacagcaa
atcgcagaagcggaagagaacggtgaggaacctccaccggaggacgagatagatgtagag
gaggaggatgaaccagatgaaactctgaaacaagcggtaagaaccggtccgtactcaatc
tgcagaaaggcgggcttggatggtcttgcaaagaaattcggtctgactccagagcatttt
gctgaaaacctacgtgacaattatcagcgtcacgaagtcgaccaggatcctacggaaccg
tcgacagtagcgcttgacttctgcggtgcaaagttcaagactcatgaagaagttctcaag
gctgcacaactgatggttgccatacagttagcacgcgaacctttagtgcgaaaatgtgtt
cgcgagatgtacatggaaagagcaaaaatatctgttcatcctacgaaaaggggtattaag
gagatagatgaaaatcatccgatctacggaatgaagtacttgaaagacaaacccgtgcgg
gatcttgatggtgatcaatttttgaaattgtcgattgctgaagaagataaacttattacg
atcaccatgagcgacaccatcgaaggaaatactagcagtaattacgtggaagaaatgaag
cagctttattacagggatgaatttagtaagactgtccaggactggaatgctttgagagtg
ggtagcgtagaaatggcgctaacgcgtatggtcataccggaccttaagaaagaactgagg
tcgaatcttattgctgaaggaaaagagtgcgtactgcgtgcttgctgtcgcaagatgtac
aattggataaaggtagcaccgtatagctgtgaatttcctgaagaggaggacgaggagtgg
gacactagcaagggacttcgtgtaatgggtatttcctatgtgcctgattactctcaagct
gcatttacctgccttgtagcgccagatggggagtgcactgattacttgaggcttccacat
ctcctaaaaagaaagaacggcttccgggaggatgagaagatgatgaaggaggctgacctt
ttggctattcgaaacttcatagctaccaaaaagcctcacgttgttgttattggtggagag
tcacgagaagcaatgatgatagctacagacttgaaggaggttatcgctactcttgtagaa
gatgaacaattcccttctattcaggtggagatatgtgacaacgagttagctaaaatttat
tcgaacagcaataaaggtatcgcagaattccgtgactatccggagcttcttcgtcaagct
atatcactcgcaagaagaatgcaggatcctcttgttgaattctcacagctgtgtaccgct
gatgaggaaatactttgtctgaggtatcataccctccaagaccagataagcaaggaagaa
cttctggagaatctctatcttgaattcgtgaatcgggttaatgaagttggtgtggatgtt
aataaagctgttcaacaggcttacgcaggtaacctcgtgcaatttgtatgcggcttgggc
cctaggaaaggtcaggccctaataaagatgctcaaacaaactaatcaaagattagaaaac
aggacgcagctggtaacagcttgtcacatgggaccaaaggtttttataaactgtgctggt
ttcattaaaatagacacaaacagtttgggagacagtacagaagcatacgtggaggtactt
gatggttctcgtgtgcatcctgagacgtacgagtgggcaaggaaaatggctgtggatgct
ttggagtacgacgatgaggacgcaaatcctgctggagctcttgaagaaattctcgagtct
cctgagaggttgaaggatctcgatctggacgcttttgccgaggaactggaaagacagggc
tttggaaacaagtgcgttacactctatgatatcagagcagaattaaacagcagatacaag
gatttgagagtgccctatcagtctccaagtgctgagaaattattcgacattcttacaaaa
gaaactccagacacattttacataggtaaactggtcttagcctccgtcgtcggaatcagc
cacaggaagccgcagggtgaacagctggaccaagcgaatcctgtacgaaacgatgaaact
ggcctttggcaatgtcccttctgtttgaagaacgacttccctgaactgtctgaagtgtgg
aatcattttgatgctggcgcttgcccgggaaaggctacgggcgtaagattgcgtctggac
aatggaatatctgggtacattcacattaagaatttgtccgataggcacgtcgctaatcca
gaggaaagagtgggcatcggtcagataattcattgtcgaatcattaaaatcgaagtcgag
cgattcagcgttgagtgtaccagcaagagcagtgatcttgctgacaagaaccatgagtgg
agaccacagaaggatcctttctacgacactgaagcagagcaaaaggacttgaaagtggaa
gaggaggctaagaaagcaaagcagaggcaaacttacgtgaaacgcgttatagttcatccg
tcgttccataatattagctttgctgaagcagagaagcttatgcaacatatgaagcaagga
gaagctatagtcagaccaagtagcaagggtgcggatcatctgacagttacctggaagata
acggatgatatctatcaacacattgacgtacgagaagaaggcaaggagaatgctttttct
cttggacaaagcctgtggattggaaatgaggagttcgaggatttagatgaaataattgct
cgacacgttaatccaatggctgcgtatgcttccgagttattagattttaagtactataaa
ccaaacattgatggtctaaaagacaaagcagaagagatattgaaggaccagaaaaaagag
aatcctggtggaattccatacatcatatctgctgccaaaagttatccaggaaaatttttg
ctctcttatttaccaagagtacgatgtcgccacgaatacgtcactgtatccccagaaggg
tttagattccgtggacaaatgtttggcagagttaacgacctgttccgctggttcaaggaa
cacttcagagacccagtaccaggtcaggcaacacctagcactccacgtggagctatgacc
tccaggacaccgtatcatacaactccaggtgttaatgtcagcggcatgaaccaggaagcc
atacaaagagttgcacagaatcttccacatcacatgattcattctttgtctcaagtggca
aatcaaactcctcatcattatcctccgcatactccaggaacagccggagctaccggctat
ggcggaatgcatacttatccaaatactccctacacaccttccggacagacgccattcatg
acaccttatcaaacaccacatcatactcctcatcacgctcaaccaacacccaggtattca
caacacagccagcacgggcaacacgggcaacagactcctagccatcatcaaggtcccttc
ttacatcctggtccacctaccgtgacacccgttcaccatagaagcactccgtcccatcga
ccaacacctcctataggaacaccatccggcgatccaatggattggaaaaaggctgccgaa
gcttgggctagactcaagcaaacgatgccaaggatgtctggcggcacaccacggtatgaa
gactccaggaaaaccccaagaggatatgaagagtcctcaggaagagcaacaccccgcaac
agaccaccatcggctcgcactccgtcgtacaagtcaccccgaggaacaccgcacacgaat
tctagtcctcggagtatgtctctaagtggagacggtactcctctctacgacgagagctaa
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integrated database retrieval system
