Cephus cinctus (wheat stem sawfly): 107272622 Help Entry 107272622         CDS       T07523                                  Name (RefSeq) ATP-dependent RNA helicase DDX42   KO K12835   ATP-dependent RNA helicase DDX42 [EC:5.6.2.7] Organism ccin  Cephus cinctus (wheat stem sawfly) Pathway ccin03040   Spliceosome Brite KEGG Orthology (KO) [BR:ccin00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     107272622  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:ccin03041]     107272622 Enzymes [BR:ccin01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.7  DEAD-box RNA helicase      107272622 Spliceosome [BR:ccin03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     107272622  Complex B     107272622  Complex C    U2 SnRNP specific factors     107272622 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DEAD Helicase_C ResIII Cas3-like_C_2 ERCC3_RAD25_C P-loop_SecA MscL Motif Other DBs NCBI-GeneID:  107272622 NCBI-ProteinID:  XP_015605428 UniProt:  A0AAJ7W6H4 LinkDB All DBs Position Unknown AA seq 783 aa AA seqDB search MSYHRGGGNKPKGFGFAGFQMSGTKRSGANIPPPPQNSALSKQGYHTMNAITENALSACW GIPKKRSKTEEEYFEDDDEPPTSSLEYIPAPGSPTYDMMKKNDRKGRDSDSEEDPLDAFM AGIDAEVKKNTFDAQFTEEERKEEKPKGFRADIDGEDDEESYYRYMEENPTAGLQQEESD QEIEYDEDGNPIAPPKKKDIDPLPSIDHSEIQYEAFEKNFYNVHEEIASLGKQQIEELRK TLGIKVTGPSPPNPVTSFAHFCFDDALMKTIRKNEYTQPTPIQAQAVPTALSGRDLIGIA KTGSGKTAAFIWPMLVHIMDQKELKHGDGPIGLILAPTRELSQQIYQEAKKFGKVYNIQV CCCYGGGSKWEQSKALEGGAEIVVATPGRMIDLVKMKATNLSRVTFLVLDEADRMFDMGF EPQVRSICNHVRPDRQTLLFSATFKKRVEKLARDVLTDPVRIVQGDVGEANTDVTQHVIM FHNNPAGKWSWLLHNIVEYLSAGSLLIFVTKKLNAEELANNLKLKEFDVLLLHGDMDQVE RNKVITAFKKKEVSILVATDVAARGLDIPHIKTVVNYDVARDIDTHTHRIGRTGRAGEKG TAYTLVTEKDKEFAGHLVRNLEGANQEVPKGLMDLAMQSAWFRKSRFKGGKGKSLNVGGA GLGFRGRPEPPSGQSCGGSSSQPPKDISEVVKKLERHGPGSDRLSAMKAAFRSQYNTQFR ASSDHTWEQTIQPASVIMPPPPPVGLSANSSTEDVNSQDGQNSENPGNQEKVERKRVRKS RWE NT seq 2352 nt NT seq  +upstreamnt  +downstreamnt atgagttaccaccgtggaggtggtaacaaacccaagggatttgggtttgcaggcttccaa atgtcaggaactaagagaagtggagctaacatacctccaccgcctcaaaattcagcactc agcaaacagggttatcatactatgaatgcaattacggaaaatgcactgtctgcatgttgg ggtataccaaagaaacgcagtaagactgaagaggaatactttgaggatgacgacgagcca ccaacttcctcattggaatacattcctgctcctggatcaccgacttacgacatgatgaaa aaaaatgatagaaagggacgtgacagcgacagtgaggaagatcctttggatgccttcatg gctggaattgacgctgaagtaaaaaagaatacttttgatgctcaatttaccgaggaagaa cggaaggaggagaaaccaaaaggattccgggctgatatcgatggagaagatgacgaggag agttactataggtatatggaagaaaatccaacagccggattgcaacaggaagaatctgat caggaaatagaatacgacgaggatggaaatcctatagctcctccaaagaagaaggatata gatcccctaccatccatagatcattcagagatacagtacgaggctttcgagaagaatttc tacaacgttcacgaggagattgctagcttggggaaacaacagattgaagaactgcgaaag actctgggtatcaaagtgactggaccgtcgccaccaaatccagtgacaagtttcgctcat ttctgttttgacgacgcgttgatgaagaccattcgcaaaaatgagtacacacagcctacg ccaattcaagctcaggctgtgcctactgcccttagtggtcgtgatctgataggaattgcg aaaaccggtagcggtaaaacagcagcctttatttggccaatgttggtacacattatggac caaaaagagctcaaacatggcgatggtcctattggtttgattctcgcgccaaccagagag ctgtcacagcagatctaccaagaggccaagaagtttggtaaggtttacaacatccaagtc tgctgctgctacgggggtggtagtaaatgggagcagagcaaagccctggagggtggtgct gaaatagtcgtagctacacctggccgaatgattgatttggtcaaaatgaaagccacaaat ttatctagggttacgtttctcgttttagacgaggctgacagaatgtttgatatgggtttt gaaccccaagtaagatctatatgtaatcacgtaagacccgacagacaaacattgttattc agcgctaccttcaaaaagagggtagaaaaattagcaagagacgttttgacggatcctgta agaatagttcagggtgacgtgggtgaagctaataccgacgttactcaacacgtcataatg ttccacaataatcctgcaggaaagtggtcctggttactgcataatattgtggaatatttg agcgctggaagtctattaatattcgttacgaaaaagttaaacgcagaggaacttgcgaac aaccttaaattgaaagagttcgatgttctccttttacatggtgacatggatcaggttgaa agaaacaaagttatcacagcttttaaaaagaaagaagtcagcattttagtagctacagac gtagccgctcgtggtttggatataccacacataaagacagtggtgaattatgacgttgcg cgagacatcgacacgcatacgcacagaataggaaggacaggtcgtgctggtgaaaaggga acggcttacaccttggtcaccgagaaggataaagaattcgctggtcacctcgtgaggaat ctcgaaggagccaatcaggaagtgccgaaaggtttaatggacctggctatgcagagcgcc tggttcagaaaatcaagattcaagggtggaaaaggtaaaagtctaaacgtcgggggtgca ggattaggttttcgtggtagaccagaaccaccctcaggacaatcctgtggtggatcctct tcccaaccaccgaaagacataagcgaagttgttaagaaactcgaaagacatggaccaggt agcgacaggctttccgccatgaaagctgccttcaggagtcagtacaacactcagttccga gcatcttccgatcacacgtgggaacagacgatacagccagcttcggtgattatgccacca ccacctcctgtaggactttctgcaaattcttcgacagaagatgttaacagtcaagacggt cagaacagtgagaatccaggaaatcaggaaaaggtggaacgaaagagggtgagaaaaagt cgatgggagtaa

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