Cephus cinctus (wheat stem sawfly): 107272992
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Entry
107272992 CDS
T07523
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
ccin
Cephus cinctus (wheat stem sawfly)
Pathway
ccin03030
DNA replication
ccin03410
Base excision repair
ccin03420
Nucleotide excision repair
ccin03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ccin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107272992
03410 Base excision repair
107272992
03420 Nucleotide excision repair
107272992
03430 Mismatch repair
107272992
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccin03032
]
107272992
03400 DNA repair and recombination proteins [BR:
ccin03400
]
107272992
DNA replication proteins [BR:
ccin03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
107272992
DNA repair and recombination proteins [BR:
ccin03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
107272992
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
BRCT_2
AAA_22
RuvB_N
AAA_30
AAA_14
AAA_33
AAA_assoc_2
AAA_5
AAA_19
RNA_helicase
PTCB-BRCT
AAA_16
AAA_11
NTPase_1
AAA_17
sCache_4
RCF1-5-like_lid
NrS1-pol-like_tail
AAA_18
PoNi_C
Motif
Other DBs
NCBI-GeneID:
107272992
NCBI-ProteinID:
XP_024946043
UniProt:
A0AAJ7RS06
LinkDB
All DBs
Position
Unknown
AA seq
1006 aa
AA seq
DB search
MPKDIRSWFPVVNTKKGNTSEEPKNNRKRRVISSDEDEPKKNSPSKKVKVNKKRNRHHTL
SDSDEEIISIKKPASLIKSPNKEDYEKKAVSPRDIFGSAPVKRVAAPKIKKTELFFKEGK
WEDDNDCLKELDTSHIEVEYFSKLEKDKNLKLVKDGIKNEDQDISEISSHASPEKKETKN
EKNKNGNKISSSDSKKDSSAQKKSKSSNSSIEDINFEPENSLKSQNRKETQSKHAPKRTK
GISHMEVEKKRKKSQSPKKDKSLDPYEERIEKKKQQVALYQQYLNRGGARNPGSKTIPEG
AEYCLAGLSFVITGVLDSLERDEATELIKKYGGRVVQSVSRKTDYIIVGDEPGVSKLDKA
KSLRVKQISEDDLLDLIRTRPSGKASEVKETHHRIRKDEKLSSPEPQFEKSSPTQSHVKK
DTKEKELENEEEPKISLSEDSGQALVEKYRPTALNKIIGQQGEKSNAKKLLNWLKNWHRN
HSGNVTHKKPSPWAKNDDGAFFKAALLSGPPGIGKTTTVQVVCKELGLDLLEYNASDTRS
KRLLKEGVSELLNNTTMKGYFTGDNKEKPAAKHVLVMDEVDGMAGNEDRGGLQELIALIK
STEVPIICICNDRNHPKMRTLANYTYDLRFHQPNHAQIKGAMLSICHKENIKIDKEELDR
LITATNRDIRQIINHLALLTENSQTKIESENHKSNKDLRLGPWDVVRKVFSAEEHKNMSI
HDKSGLFFHDYNIAALFVQENYLSVVPQAPKAELMERVAKAAHSLAMGDIIEKNIRQSNA
WSLLPVQACFSSVIPGTVMSGRITSQINFPSWLGRNSKSGKFDRLRQEVSIHTRLATSAS
KDAINLDYLTYLRDFIIKPMINNGIEGVESSVKIMNDYHLMREDLDSILELSTWPGQRDP
MQALDSKVKAAFTRTYNKSSVLTPYSINSGTIKKKNKTSQDDDYMEDENEEGAQLSEEDD
EDNLDMDKMIKPKKSVASKKVVSTTTNEAGSSKRGKGRGKGRGKGK
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaggatattcgatcatggtttcctgttgttaatacgaaaaaaggtaataccagt
gaagagccaaaaaataatagaaaacgccgtgttatatcttcagatgaagatgagccaaag
aagaattcgccatctaaaaaagtcaaggttaataagaaacgcaaccgtcatcatactcta
tccgattcggatgaagaaataatcagtataaagaaaccagcttctctaataaaatcaccc
aataaagaagactatgaaaaaaaagcagtttctcctcgtgacatctttggtagtgctcct
gttaagagagttgcagctccaaaaattaagaagactgaactattttttaaggaagggaaa
tgggaggatgataatgattgtcttaaggaattagatacgtcacacattgaagtagagtat
ttttcaaagttggagaaagataaaaatttaaaacttgtgaaggatggaataaaaaatgaa
gatcaagatatatcagaaatatcatcacatgcatcacctgaaaagaaggaaacaaagaat
gagaaaaacaaaaatggaaataaaatctcaagttcagatagcaaaaaggattcttctgca
cagaaaaagagtaaatctagtaattcttccatagaggatataaattttgaaccagaaaac
agtttgaaatctcaaaatcgtaaggaaacacaaagcaaacatgcaccgaaaagaactaaa
ggtatctctcacatggaagtggagaagaaacgtaaaaaaagtcaaagccctaaaaaggat
aaatcattggatccatatgaggaaagaattgaaaaaaagaaacaacaagttgctttgtat
caacaatatcttaatagaggtggtgcacgaaatccaggctccaaaacaatacctgaggga
gctgagtattgtttagctggattgagtttcgtgataaccggtgttttggattcgttagaa
agagatgaagctactgaacttattaagaaatacggaggccgcgtcgtacaatccgtgtcg
agaaaaactgattatatcatagttggggatgaaccaggtgtttcaaaactagataaggca
aaaagtttaagagtgaaacaaatatcggaagatgatctgttagatttgattcgaactcga
ccttctggaaaagcatcagaagtaaaagaaacgcatcacagaatacggaaagatgaaaaa
ttatcgtcacctgaaccacagtttgaaaaatcaagccctacacaatcacatgttaagaaa
gacacaaaagaaaaagaattggaaaacgaagaagaaccgaaaatttcacttagcgaagat
agtggacaagcattggttgagaaatacagaccaacagcgttgaataaaattattggccaa
caaggagagaaaagtaatgctaagaaattattaaattggctgaaaaattggcatagaaat
cacagtggcaacgtcacacataaaaagccaagtccatgggcgaaaaatgatgatggagct
ttcttcaaagctgctctactctctggaccaccaggtattggaaaaactacaacagtccaa
gtagtttgcaaagaattgggtttggatttgttagaatacaatgcctctgatacaagaagt
aaacgtttattaaaggaaggagtttctgagttactgaacaatacaacgatgaaaggttac
ttcactggagataacaaagagaagccagcagccaaacatgttctcgtaatggacgaagtg
gatggtatggctggtaatgaagatcgaggtggtttacaagaattgattgctttgatcaaa
tccacggaagtaccaattatttgtatttgtaacgacagaaaccatccaaaaatgaggacg
ctcgcaaattatacttacgatttacgttttcaccagcccaatcacgctcaaatcaaagga
gccatgttatcaatttgtcataaagaaaatatcaaaatagacaaggaagaactggaccgt
ttgataacagcgacaaatcgtgacattcgtcaaatcataaatcatttagcattgctcaca
gaaaattcccaaactaaaatcgaatcggaaaatcataaatctaacaaggacctgagatta
ggtccttgggatgttgtacggaaagtcttcagtgctgaggaacataagaatatgagtata
cacgataaaagcggcttatttttccatgattataatatagcggcattatttgtacaagag
aattatctttctgtggtaccgcaagctccaaaggccgaactaatggagagagttgctaaa
gctgctcacagtttagcaatgggtgatattattgagaagaatattcgtcagtcaaatgca
tggtctctgttacctgtgcaagcttgtttctcatctgtaataccagggactgtcatgtct
ggtcgaattacgtcacaaattaattttccatcttggctgggtcgcaattccaaaagtgga
aaatttgatagattacgacaagaagtttctattcatacgcgattggctacttctgccagt
aaagatgctataaatttggattacttaacatatttaagagattttatcattaagccaatg
attaataatggtatagaaggtgtggaatcgtcagtgaaaatcatgaatgattatcatctt
atgagggaagacttggattctatattagaactttctacatggccaggacagcgagatcct
atgcaggctcttgacagcaaagtgaaagctgcgttcacgagaacatataacaaaagttca
gtactaaccccatactctataaacagtggtacgataaagaaaaaaaataaaacttcacag
gacgatgactatatggaagatgagaatgaggaaggtgcgcaactttctgaagaagacgat
gaagataatctagatatggataagatgattaagcccaaaaaatcagtagcatccaagaaa
gtagtatctacgactacaaatgaagcgggatccagcaaacgtgggaaaggtcggggtaaa
ggtcgtggcaaaggaaaataa
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